RNA–Protein interactions for RNA: ENST00000527962.5

CTTN-212, Transcript of cortactin, humanhuman

TSL 2

Gene CTTN, Length 587 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-212ENST00000527962 VSTM1Q6UX27 236 aa16.87■□□□□ 0.29
CTTN-212ENST00000527962 ARL14EPQ8N8R7 260 aaPredicted RBP16.87■□□□□ 0.29
CTTN-212ENST00000527962 SH3RF2Q8TEC5 729 aa16.87■□□□□ 0.29
CTTN-212ENST00000527962 CYP2S1Q96SQ9 504 aa16.87■□□□□ 0.29
CTTN-212ENST00000527962 DUSP15Q9H1R2 295 aaPredicted RBP16.87■□□□□ 0.29
CTTN-212ENST00000527962 TRPM5Q9NZQ8 1165 aa16.87■□□□□ 0.29
CTTN-212ENST00000527962 ARHGAP26Q9UNA1 814 aa16.87■□□□□ 0.29
CTTN-212ENST00000527962 SRPRBQ9Y5M8 271 aaKnown RBP16.87■□□□□ 0.29
CTTN-212ENST00000527962 WNT6Q9Y6F9 365 aa16.87■□□□□ 0.29
CTTN-212ENST00000527962 VPS37CA5D8V6 355 aaPredicted RBP16.86■□□□□ 0.29
CTTN-212ENST00000527962 MYMKA6NI61 221 aa16.86■□□□□ 0.29
CTTN-212ENST00000527962 GABRDO14764 452 aa16.86■□□□□ 0.29
CTTN-212ENST00000527962 KCNK5O95279 499 aa16.86■□□□□ 0.29
CTTN-212ENST00000527962 TCF3P15923 654 aa16.86■□□□□ 0.29
CTTN-212ENST00000527962 GRIK1P39086 918 aa16.86■□□□□ 0.29
CTTN-212ENST00000527962 KCNA1Q09470 495 aa16.86■□□□□ 0.29
CTTN-212ENST00000527962 USP4Q13107 963 aa16.86■□□□□ 0.29
CTTN-212ENST00000527962 EML3Q32P44 896 aa16.86■□□□□ 0.29
CTTN-212ENST00000527962 GPD1LQ8N335 351 aa16.86■□□□□ 0.29
CTTN-212ENST00000527962 KIAA1958Q8N8K9 716 aa16.86■□□□□ 0.29
CTTN-212ENST00000527962 STKLD1Q8NE28 680 aa16.86■□□□□ 0.29
CTTN-212ENST00000527962 SPATA17Q96L03 361 aa16.86■□□□□ 0.29
CTTN-212ENST00000527962 LRRC27Q9C0I9 530 aa16.86■□□□□ 0.29
CTTN-212ENST00000527962 IKZF4Q9H2S9 585 aa16.86■□□□□ 0.29
CTTN-212ENST00000527962 RXFP3Q9NSD7 469 aa16.86■□□□□ 0.29
CTTN-212ENST00000527962 CDH9Q9ULB4 789 aa16.86■□□□□ 0.29
CTTN-212ENST00000527962 MAP1BP46821 2468 aaKnown RBP16.86■□□□□ 0.29
CTTN-212ENST00000527962 CEP295Q9C0D2 2601 aa16.85■□□□□ 0.29
CTTN-212ENST00000527962 SDK1Q7Z5N4 2213 aa16.85■□□□□ 0.29
CTTN-212ENST00000527962 BCLAF3A2AJT9 711 aaKnown RBP16.85■□□□□ 0.29
CTTN-212ENST00000527962 GOLGA8IPA6NC78 632 aa16.85■□□□□ 0.29
CTTN-212ENST00000527962 ZNF233A6NK53 670 aa16.85■□□□□ 0.29
CTTN-212ENST00000527962 GOLGA8JA6NMD2 632 aa16.85■□□□□ 0.29
CTTN-212ENST00000527962 SLC9A3R1O14745 358 aaPredicted RBP16.85■□□□□ 0.29
CTTN-212ENST00000527962 KHNYNO15037 678 aaKnown RBP16.85■□□□□ 0.29
CTTN-212ENST00000527962 TADA3O75528 432 aa16.85■□□□□ 0.29
CTTN-212ENST00000527962 ALDH1A2O94788 518 aa16.85■□□□□ 0.29
CTTN-212ENST00000527962 STAT6P42226 847 aa16.85■□□□□ 0.29
CTTN-212ENST00000527962 DUOXA2Q1HG44 320 aa16.85■□□□□ 0.29
CTTN-212ENST00000527962 SOWAHAQ2M3V2 549 aa16.85■□□□□ 0.29
CTTN-212ENST00000527962 FAM171BQ6P995 826 aa16.85■□□□□ 0.29
CTTN-212ENST00000527962 DENND5BQ6ZUT9 1274 aa16.85■□□□□ 0.29
CTTN-212ENST00000527962 HPDLQ96IR7 371 aa16.85■□□□□ 0.29
CTTN-212ENST00000527962 PKMYT1Q99640 499 aa16.85■□□□□ 0.29
CTTN-212ENST00000527962 EDEM2Q9BV94 578 aa16.85■□□□□ 0.29
CTTN-212ENST00000527962 MTMR12Q9C0I1 747 aa16.85■□□□□ 0.29
CTTN-212ENST00000527962 KIAA1586Q9HCI6 787 aa16.85■□□□□ 0.29
CTTN-212ENST00000527962 PDE11AQ9HCR9 933 aa16.85■□□□□ 0.29
CTTN-212ENST00000527962 PANK4Q9NVE7 773 aa16.85■□□□□ 0.29
CTTN-212ENST00000527962 TRIM66O15016 1216 aa16.84■□□□□ 0.29
CTTN-212ENST00000527962 CYP27A1Q02318 531 aa16.84■□□□□ 0.29
CTTN-212ENST00000527962 PSAPL1Q6NUJ1 521 aa16.84■□□□□ 0.29
CTTN-212ENST00000527962 USP49Q70CQ1 688 aa16.84■□□□□ 0.29
CTTN-212ENST00000527962 CCDC65Q8IXS2 484 aa16.84■□□□□ 0.29
CTTN-212ENST00000527962 RIN3Q8TB24 985 aa16.84■□□□□ 0.29
CTTN-212ENST00000527962 DNAJC19Q96DA6 116 aa16.84■□□□□ 0.29
CTTN-212ENST00000527962 SLC22A12Q96S37 553 aa16.84■□□□□ 0.29
CTTN-212ENST00000527962 MMS19Q96T76 1030 aa16.84■□□□□ 0.29
CTTN-212ENST00000527962 SYT15Q9BQS2 421 aa16.84■□□□□ 0.29
CTTN-212ENST00000527962 SMOC1Q9H4F8 434 aa16.84■□□□□ 0.29
CTTN-212ENST00000527962 PCIF1Q9H4Z3 704 aa16.84■□□□□ 0.29
CTTN-212ENST00000527962 INTS13Q9NVM9 706 aa16.84■□□□□ 0.29
CTTN-212ENST00000527962 GCNT4Q9P109 453 aa16.84■□□□□ 0.29
CTTN-212ENST00000527962 FBXO2Q9UK22 296 aaPredicted RBP16.84■□□□□ 0.29
CTTN-212ENST00000527962 CLIC4Q9Y696 253 aa16.84■□□□□ 0.29
CTTN-212ENST00000527962 TSC2P49815 1807 aa16.84■□□□□ 0.29
CTTN-212ENST00000527962 SCN1AP35498 2009 aa16.84■□□□□ 0.29
CTTN-212ENST00000527962 RALGAPA1Q6GYQ0 2036 aa16.84■□□□□ 0.29
CTTN-212ENST00000527962 C2orf78A6NCI8 922 aa16.83■□□□□ 0.28
CTTN-212ENST00000527962 DCLK1O15075 740 aa16.83■□□□□ 0.28
CTTN-212ENST00000527962 NOVA1P51513 510 aaKnown RBP16.83■□□□□ 0.28
CTTN-212ENST00000527962 C2orf27AQ580R0 203 aa16.83■□□□□ 0.28
CTTN-212ENST00000527962 LMBRD2Q68DH5 695 aaPredicted RBP16.83■□□□□ 0.28
CTTN-212ENST00000527962 OSTM1Q86WC4 334 aa16.83■□□□□ 0.28
CTTN-212ENST00000527962 CXorf38Q8TB03 319 aa16.83■□□□□ 0.28
CTTN-212ENST00000527962 USP33Q8TEY7 942 aa16.83■□□□□ 0.28
CTTN-212ENST00000527962 CBWD1Q9BRT8 395 aa16.83■□□□□ 0.28
CTTN-212ENST00000527962 LINC00597Q9H2U6 94 aa16.83■□□□□ 0.28
CTTN-212ENST00000527962 SNX25Q9H3E2 840 aa16.83■□□□□ 0.28
CTTN-212ENST00000527962 POLR3BQ9NW08 1133 aaPredicted RBP16.83■□□□□ 0.28
CTTN-212ENST00000527962 SIX4Q9UIU6 781 aa16.83■□□□□ 0.28
CTTN-212ENST00000527962 C4orf47A7E2U8 309 aa16.82■□□□□ 0.28
CTTN-212ENST00000527962 LEFTY2O00292 366 aa16.82■□□□□ 0.28
CTTN-212ENST00000527962 PRPF6O94906 941 aaKnown RBP16.82■□□□□ 0.28
CTTN-212ENST00000527962 CD2BP2O95400 341 aaKnown RBP16.82■□□□□ 0.28
CTTN-212ENST00000527962 BDNFP23560 247 aa16.82■□□□□ 0.28
CTTN-212ENST00000527962 WNT7BP56706 349 aa16.82■□□□□ 0.28
CTTN-212ENST00000527962 MRPS21P82921 87 aaKnown RBP16.82■□□□□ 0.28
CTTN-212ENST00000527962 BYSLQ13895 437 aaKnown RBP16.82■□□□□ 0.28
CTTN-212ENST00000527962 HSF5Q4G112 596 aaPredicted RBP16.82■□□□□ 0.28
CTTN-212ENST00000527962 NAIF1Q69YI7 327 aaPredicted RBP16.82■□□□□ 0.28
CTTN-212ENST00000527962 TCEAL6Q6IPX3 200 aa16.82■□□□□ 0.28
CTTN-212ENST00000527962 ANO7Q6IWH7 933 aa16.82■□□□□ 0.28
CTTN-212ENST00000527962 CYP2U1Q7Z449 544 aa16.82■□□□□ 0.28
CTTN-212ENST00000527962 DDX42Q86XP3 938 aaKnown RBP eCLIP16.82■□□□□ 0.28
CTTN-212ENST00000527962 MYCBPAPQ8TBZ2 947 aa16.82■□□□□ 0.28
CTTN-212ENST00000527962 TCEAL3Q969E4 200 aa16.82■□□□□ 0.28
CTTN-212ENST00000527962 MYLPFQ96A32 169 aa16.82■□□□□ 0.28
CTTN-212ENST00000527962 SPACA7Q96KW9 195 aa16.82■□□□□ 0.28
CTTN-212ENST00000527962 CNOT6LQ96LI5 555 aaKnown RBP16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms