RNA–Protein interactions for RNA: ENST00000527825.1

CHD7-205, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 3

Gene CHD7, Length 434 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-205ENST00000527825 SFPQP23246 707 aaKnown RBP eCLIP4.45□□□□□ -1.7
CHD7-205ENST00000527825 GJB2P29033 226 aa4.45□□□□□ -1.7
CHD7-205ENST00000527825 SOX9P48436 509 aa4.45□□□□□ -1.7
CHD7-205ENST00000527825 ZNF165P49910 485 aa4.45□□□□□ -1.7
CHD7-205ENST00000527825 CLCN3P51790 818 aa4.45□□□□□ -1.7
CHD7-205ENST00000527825 RIPPLY3P57055 190 aa4.45□□□□□ -1.7
CHD7-205ENST00000527825 ACTR2P61160 394 aa4.45□□□□□ -1.7
CHD7-205ENST00000527825 ORC1Q13415 861 aa4.45□□□□□ -1.7
CHD7-205ENST00000527825 PON2Q15165 354 aa4.45□□□□□ -1.7
CHD7-205ENST00000527825 PTPAQ15257 358 aa4.45□□□□□ -1.7
CHD7-205ENST00000527825 STX1AQ16623 288 aa4.45□□□□□ -1.7
CHD7-205ENST00000527825 ZSCAN26Q16670 478 aa4.45□□□□□ -1.7
CHD7-205ENST00000527825 USP39Q53GS9 565 aaKnown RBP4.45□□□□□ -1.7
CHD7-205ENST00000527825 E4F1Q66K89 784 aaPredicted RBP4.45□□□□□ -1.7
CHD7-205ENST00000527825 PMS2CLQ68D20 193 aa4.45□□□□□ -1.7
CHD7-205ENST00000527825 EFCAB12Q6NXP0 572 aa4.45□□□□□ -1.7
CHD7-205ENST00000527825 LILRA6Q6PI73 481 aa4.45□□□□□ -1.7
CHD7-205ENST00000527825 TXNDC11Q6PKC3 985 aa4.45□□□□□ -1.7
CHD7-205ENST00000527825 TMCO3Q6UWJ1 677 aa4.45□□□□□ -1.7
CHD7-205ENST00000527825 VITQ6UXI7 678 aa4.45□□□□□ -1.7
CHD7-205ENST00000527825 MFSD6Q6ZSS7 791 aa4.45□□□□□ -1.7
CHD7-205ENST00000527825 TRMT1LQ7Z2T5 733 aaKnown RBP4.45□□□□□ -1.7
CHD7-205ENST00000527825 HAUS6Q7Z4H7 955 aa4.45□□□□□ -1.7
CHD7-205ENST00000527825 PIP4P1Q86T03 277 aa4.45□□□□□ -1.7
CHD7-205ENST00000527825 RALGPS2Q86X27 583 aaPredicted RBP4.45□□□□□ -1.7
CHD7-205ENST00000527825 DGKHQ86XP1 1220 aa4.45□□□□□ -1.7
CHD7-205ENST00000527825 CEP57Q86XR8 500 aa4.45□□□□□ -1.7
CHD7-205ENST00000527825 MAP4K3Q8IVH8 894 aa4.45□□□□□ -1.7
CHD7-205ENST00000527825 REXO1L1PQ8IX06 675 aa4.45□□□□□ -1.7
CHD7-205ENST00000527825 TMEM102Q8N9M5 508 aaPredicted RBP4.45□□□□□ -1.7
CHD7-205ENST00000527825 NEK11Q8NG66 645 aa4.45□□□□□ -1.7
CHD7-205ENST00000527825 PI4K2BQ8TCG2 481 aa4.45□□□□□ -1.7
CHD7-205ENST00000527825 LEO1Q8WVC0 666 aaPredicted RBP4.45□□□□□ -1.7
CHD7-205ENST00000527825 ESR2Q92731 530 aa4.45□□□□□ -1.7
CHD7-205ENST00000527825 GTF3C6Q969F1 213 aa4.45□□□□□ -1.7
CHD7-205ENST00000527825 SMARCE1Q969G3 411 aa4.45□□□□□ -1.7
CHD7-205ENST00000527825 ZNF668Q96K58 619 aaPredicted RBP4.45□□□□□ -1.7
CHD7-205ENST00000527825 PPP1R13BQ96KQ4 1090 aa4.45□□□□□ -1.7
CHD7-205ENST00000527825 DMRTB1Q96MA1 342 aa4.45□□□□□ -1.7
CHD7-205ENST00000527825 HHIPQ96QV1 700 aa4.45□□□□□ -1.7
CHD7-205ENST00000527825 MYCBPQ99417 103 aaPredicted RBP4.45□□□□□ -1.7
CHD7-205ENST00000527825 BPIFA3Q9BQP9 254 aa4.45□□□□□ -1.7
CHD7-205ENST00000527825 GCOM2Q9BZD3 368 aaPredicted RBP4.45□□□□□ -1.7
CHD7-205ENST00000527825 TRIM5Q9C035 493 aa4.45□□□□□ -1.7
CHD7-205ENST00000527825 LRRCC1Q9C099 1032 aa4.45□□□□□ -1.7
CHD7-205ENST00000527825 NIF3L1Q9GZT8 377 aa4.45□□□□□ -1.7
CHD7-205ENST00000527825 TNMDQ9H2S6 317 aa4.45□□□□□ -1.7
CHD7-205ENST00000527825 PRORYQ9H606 182 aa4.45□□□□□ -1.7
CHD7-205ENST00000527825 RSAD1Q9HA92 442 aa4.45□□□□□ -1.7
CHD7-205ENST00000527825 SRA1Q9HD15 236 aaKnown RBP4.45□□□□□ -1.7
CHD7-205ENST00000527825 LATS2Q9NRM7 1088 aa4.45□□□□□ -1.7
CHD7-205ENST00000527825 FAM105AQ9NUU6 356 aa4.45□□□□□ -1.7
CHD7-205ENST00000527825 C2orf42Q9NWW7 574 aa4.45□□□□□ -1.7
CHD7-205ENST00000527825 DNMT3BQ9UBC3 853 aaKnown RBP4.45□□□□□ -1.7
CHD7-205ENST00000527825 RSPH14Q9UHP6 348 aa4.45□□□□□ -1.7
CHD7-205ENST00000527825 TCEAL9Q9UHQ7 104 aa4.45□□□□□ -1.7
CHD7-205ENST00000527825 EVLQ9UI08 416 aaPredicted RBP4.45□□□□□ -1.7
CHD7-205ENST00000527825 DCTN4Q9UJW0 460 aa4.45□□□□□ -1.7
CHD7-205ENST00000527825 ANAPC4Q9UJX5 808 aa4.45□□□□□ -1.7
CHD7-205ENST00000527825 FBXW11Q9UKB1 542 aa4.45□□□□□ -1.7
CHD7-205ENST00000527825 CEP131Q9UPN4 1083 aa4.45□□□□□ -1.7
CHD7-205ENST00000527825 PIN4Q9Y237 131 aaKnown RBP4.45□□□□□ -1.7
CHD7-205ENST00000527825 RRP15Q9Y3B9 282 aaKnown RBP4.45□□□□□ -1.7
CHD7-205ENST00000527825 F5P12259 2224 aa4.45□□□□□ -1.7
CHD7-205ENST00000527825 CNTNAP2Q9UHC6 1331 aa4.45□□□□□ -1.7
CHD7-205ENST00000527825 PTPRDP23468 1912 aa4.44□□□□□ -1.7
CHD7-205ENST00000527825 PLXND1Q9Y4D7 1925 aa4.44□□□□□ -1.7
CHD7-205ENST00000527825 ASXL3Q9C0F0 2248 aa4.44□□□□□ -1.7
CHD7-205ENST00000527825 TRABD2BA6NFA1 517 aa4.44□□□□□ -1.7
CHD7-205ENST00000527825 KLRF2D3W0D1 207 aa4.44□□□□□ -1.7
CHD7-205ENST00000527825 MAP2K7O14733 419 aa4.44□□□□□ -1.7
CHD7-205ENST00000527825 MAGEB2O15479 319 aa4.44□□□□□ -1.7
CHD7-205ENST00000527825 MAFGO15525 162 aa4.44□□□□□ -1.7
CHD7-205ENST00000527825 ZNF862O60290 1169 aa4.44□□□□□ -1.7
CHD7-205ENST00000527825 CPNE3O75131 537 aaKnown RBP4.44□□□□□ -1.7
CHD7-205ENST00000527825 TADA2AO75478 443 aa4.44□□□□□ -1.7
CHD7-205ENST00000527825 ALX3O95076 343 aa4.44□□□□□ -1.7
CHD7-205ENST00000527825 C22orf31O95567 290 aa4.44□□□□□ -1.7
CHD7-205ENST00000527825 APBB3O95704 486 aa4.44□□□□□ -1.7
CHD7-205ENST00000527825 LRG1P02750 347 aa4.44□□□□□ -1.7
CHD7-205ENST00000527825 SKILP12757 684 aa4.44□□□□□ -1.7
CHD7-205ENST00000527825 GP1BBP13224 206 aa4.44□□□□□ -1.7
CHD7-205ENST00000527825 DARSP14868 501 aaKnown RBP4.44□□□□□ -1.7
CHD7-205ENST00000527825 CEBPBP17676 345 aa4.44□□□□□ -1.7
CHD7-205ENST00000527825 PTPN2P17706 415 aa4.44□□□□□ -1.7
CHD7-205ENST00000527825 ITPKBP27987 946 aa4.44□□□□□ -1.7
CHD7-205ENST00000527825 MAPK1P28482 360 aa4.44□□□□□ -1.7
CHD7-205ENST00000527825 OAS2P29728 719 aaKnown RBP4.44□□□□□ -1.7
CHD7-205ENST00000527825 HOXC13P31276 330 aa4.44□□□□□ -1.7
CHD7-205ENST00000527825 ELF1P32519 619 aa4.44□□□□□ -1.7
CHD7-205ENST00000527825 KIF5BP33176 963 aa4.44□□□□□ -1.7
CHD7-205ENST00000527825 ACTN2P35609 894 aa4.44□□□□□ -1.7
CHD7-205ENST00000527825 DPP6P42658 865 aa4.44□□□□□ -1.7
CHD7-205ENST00000527825 IL12RB1P42701 662 aa4.44□□□□□ -1.7
CHD7-205ENST00000527825 CCR10P46092 362 aa4.44□□□□□ -1.7
CHD7-205ENST00000527825 MLLT6P55198 1093 aaPredicted RBP4.44□□□□□ -1.7
CHD7-205ENST00000527825 GSCP56915 257 aaPredicted RBP4.44□□□□□ -1.7
CHD7-205ENST00000527825 ETF1P62495 437 aaKnown RBP4.44□□□□□ -1.7
CHD7-205ENST00000527825 CXADRP78310 365 aa4.44□□□□□ -1.7
CHD7-205ENST00000527825 SETQ01105 290 aaPredicted RBP4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms