RNA–Protein interactions for RNA: ENST00000527739.5

CAPN1-211, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-211ENST00000527739 DLG4P78352 724 aa20.57■□□□□ 0.88
CAPN1-211ENST00000527739 NCOA4Q13772 614 aa20.57■□□□□ 0.88
CAPN1-211ENST00000527739 ZNF667Q5HYK9 610 aa20.57■□□□□ 0.88
CAPN1-211ENST00000527739 VSTM1Q6UX27 236 aa20.57■□□□□ 0.88
CAPN1-211ENST00000527739 SCARA5Q6ZMJ2 495 aa20.57■□□□□ 0.88
CAPN1-211ENST00000527739 ERMP1Q7Z2K6 904 aa20.57■□□□□ 0.88
CAPN1-211ENST00000527739 MON1AQ86VX9 555 aa20.57■□□□□ 0.88
CAPN1-211ENST00000527739 MYCBPAPQ8TBZ2 947 aa20.57■□□□□ 0.88
CAPN1-211ENST00000527739 RMDN1Q96DB5 314 aa20.57■□□□□ 0.88
CAPN1-211ENST00000527739 PCED1BQ96HM7 432 aa20.57■□□□□ 0.88
CAPN1-211ENST00000527739 SEMA4AQ9H3S1 761 aa20.57■□□□□ 0.88
CAPN1-211ENST00000527739 DPEP3Q9H4B8 488 aa20.57■□□□□ 0.88
CAPN1-211ENST00000527739 C8orf33Q9H7E9 229 aaPredicted RBP20.57■□□□□ 0.88
CAPN1-211ENST00000527739 GKN1Q9NS71 199 aa20.57■□□□□ 0.88
CAPN1-211ENST00000527739 TDP1Q9NUW8 608 aa20.57■□□□□ 0.88
CAPN1-211ENST00000527739 CCL26Q9Y258 94 aa20.57■□□□□ 0.88
CAPN1-211ENST00000527739 FRYLO94915 3013 aa20.56■□□□□ 0.88
CAPN1-211ENST00000527739 CACNA1IQ9P0X4 2223 aa20.56■□□□□ 0.88
CAPN1-211ENST00000527739 ARNTLO00327 626 aa20.56■□□□□ 0.88
CAPN1-211ENST00000527739 C4BPAP04003 597 aaKnown RBP20.56■□□□□ 0.88
CAPN1-211ENST00000527739 FAM163BP0C2L3 166 aa20.56■□□□□ 0.88
CAPN1-211ENST00000527739 RPS9P46781 194 aaKnown RBP20.56■□□□□ 0.88
CAPN1-211ENST00000527739 CDH8P55286 799 aa20.56■□□□□ 0.88
CAPN1-211ENST00000527739 NUCB2P80303 420 aa20.56■□□□□ 0.88
CAPN1-211ENST00000527739 PLCB2Q00722 1185 aa20.56■□□□□ 0.88
CAPN1-211ENST00000527739 TNK2Q07912 1038 aa20.56■□□□□ 0.88
CAPN1-211ENST00000527739 CC2D1AQ6P1N0 951 aaPredicted RBP20.56■□□□□ 0.88
CAPN1-211ENST00000527739 ZC3H14Q6PJT7 736 aaKnown RBP20.56■□□□□ 0.88
CAPN1-211ENST00000527739 DCLK2Q8N568 766 aa20.56■□□□□ 0.88
CAPN1-211ENST00000527739 USP13Q92995 863 aaPredicted RBP20.56■□□□□ 0.88
CAPN1-211ENST00000527739 CYP2S1Q96SQ9 504 aa20.56■□□□□ 0.88
CAPN1-211ENST00000527739 XYLT2Q9H1B5 865 aa20.56■□□□□ 0.88
CAPN1-211ENST00000527739 SMYD3Q9H7B4 428 aa20.56■□□□□ 0.88
CAPN1-211ENST00000527739 FANCMQ8IYD8 2048 aa20.56■□□□□ 0.88
CAPN1-211ENST00000527739 MIA3Q5JRA6 1907 aa20.55■□□□□ 0.88
CAPN1-211ENST00000527739 STAU1O95793 577 aaKnown RBP20.55■□□□□ 0.88
CAPN1-211ENST00000527739 NR2F2P24468 414 aa20.55■□□□□ 0.88
CAPN1-211ENST00000527739 RAP1GAPP47736 663 aa20.55■□□□□ 0.88
CAPN1-211ENST00000527739 MTAPQ13126 283 aa20.55■□□□□ 0.88
CAPN1-211ENST00000527739 FZD5Q13467 585 aa20.55■□□□□ 0.88
CAPN1-211ENST00000527739 TRMT2BQ96GJ1 504 aaKnown RBP20.55■□□□□ 0.88
CAPN1-211ENST00000527739 MYRFLQ96LU7 910 aa20.55■□□□□ 0.88
CAPN1-211ENST00000527739 MED10Q9BTT4 135 aa20.55■□□□□ 0.88
CAPN1-211ENST00000527739 UTP3Q9NQZ2 479 aaKnown RBP eCLIP20.55■□□□□ 0.882e-14■■■■■ 49.7
CAPN1-211ENST00000527739 TRAF3IP3Q9Y228 551 aa20.55■□□□□ 0.88
CAPN1-211ENST00000527739 NME7Q9Y5B8 376 aa20.55■□□□□ 0.88
CAPN1-211ENST00000527739 TRAV19A0A0A6YYK7 116 aa20.54■□□□□ 0.88
CAPN1-211ENST00000527739 SPECC1L-ADORA2AF8WAN1 911 aa20.54■□□□□ 0.88
CAPN1-211ENST00000527739 CLDN5O00501 218 aa20.54■□□□□ 0.88
CAPN1-211ENST00000527739 TRIM66O15016 1216 aa20.54■□□□□ 0.88
CAPN1-211ENST00000527739 VNN1O95497 513 aa20.54■□□□□ 0.88
CAPN1-211ENST00000527739 CKMP06732 381 aa20.54■□□□□ 0.88
CAPN1-211ENST00000527739 P4HA1P13674 534 aa20.54■□□□□ 0.88
CAPN1-211ENST00000527739 VAMP7P51809 220 aa20.54■□□□□ 0.88
CAPN1-211ENST00000527739 CLDN10P78369 228 aa20.54■□□□□ 0.88
CAPN1-211ENST00000527739 SGSM1Q2NKQ1 1148 aa20.54■□□□□ 0.88
CAPN1-211ENST00000527739 ITPRIPL2Q3MIP1 535 aa20.54■□□□□ 0.88
CAPN1-211ENST00000527739 TSSK4Q6SA08 328 aa20.54■□□□□ 0.88
CAPN1-211ENST00000527739 DENND5BQ6ZUT9 1274 aa20.54■□□□□ 0.88
CAPN1-211ENST00000527739 TMC2Q8TDI7 906 aa20.54■□□□□ 0.88
CAPN1-211ENST00000527739 SPATA17Q96L03 361 aa20.54■□□□□ 0.88
CAPN1-211ENST00000527739 FBXO4Q9UKT5 387 aa20.54■□□□□ 0.88
CAPN1-211ENST00000527739 CACNA1AO00555 2505 aa20.54■□□□□ 0.88
CAPN1-211ENST00000527739 F8VP50 259 aa20.53■□□□□ 0.88
CAPN1-211ENST00000527739 TADA3O75528 432 aa20.53■□□□□ 0.88
CAPN1-211ENST00000527739 ABL1P00519 1130 aa20.53■□□□□ 0.88
CAPN1-211ENST00000527739 USP17L7P0C7H9 530 aa20.53■□□□□ 0.88
CAPN1-211ENST00000527739 KRT13P13646 458 aa20.53■□□□□ 0.88
CAPN1-211ENST00000527739 RPL13P26373 211 aaKnown RBP20.53■□□□□ 0.88
CAPN1-211ENST00000527739 MLLT6P55198 1093 aaPredicted RBP20.53■□□□□ 0.88
CAPN1-211ENST00000527739 IFRD2Q12894 506 aaPredicted RBP20.53■□□□□ 0.88
CAPN1-211ENST00000527739 ADAM9Q13443 819 aa20.53■□□□□ 0.88
CAPN1-211ENST00000527739 PNOCQ13519 176 aa20.53■□□□□ 0.88
CAPN1-211ENST00000527739 KCNB1Q14721 858 aa20.53■□□□□ 0.88
CAPN1-211ENST00000527739 PON2Q15165 354 aa20.53■□□□□ 0.88
CAPN1-211ENST00000527739 TRIM68Q6AZZ1 485 aa20.53■□□□□ 0.88
CAPN1-211ENST00000527739 C1orf228Q6PIY5 440 aa20.53■□□□□ 0.88
CAPN1-211ENST00000527739 SV2AQ7L0J3 742 aa20.53■□□□□ 0.88
CAPN1-211ENST00000527739 RALGPS2Q86X27 583 aaPredicted RBP20.53■□□□□ 0.88
CAPN1-211ENST00000527739 ARL14EPQ8N8R7 260 aaPredicted RBP20.53■□□□□ 0.88
CAPN1-211ENST00000527739 SUMF1Q8NBK3 374 aa20.53■□□□□ 0.88
CAPN1-211ENST00000527739 B3GALNT2Q8NCR0 500 aa20.53■□□□□ 0.88
CAPN1-211ENST00000527739 TMEM174Q8WUU8 243 aa20.53■□□□□ 0.88
CAPN1-211ENST00000527739 ATRIPQ8WXE1 791 aa20.53■□□□□ 0.88
CAPN1-211ENST00000527739 MSANTD3Q96H12 275 aa20.53■□□□□ 0.88
CAPN1-211ENST00000527739 HINFPQ9BQA5 517 aa20.53■□□□□ 0.88
CAPN1-211ENST00000527739 B3GNT5Q9BYG0 378 aa20.53■□□□□ 0.88
CAPN1-211ENST00000527739 ZNF518BQ9C0D4 1074 aa20.53■□□□□ 0.88
CAPN1-211ENST00000527739 EBF3Q9H4W6 596 aa20.53■□□□□ 0.88
CAPN1-211ENST00000527739 MMRN2Q9H8L6 949 aa20.53■□□□□ 0.88
CAPN1-211ENST00000527739 KIF9Q9HAQ2 790 aa20.53■□□□□ 0.88
CAPN1-211ENST00000527739 RBM12Q9NTZ6 932 aaKnown RBP20.53■□□□□ 0.88
CAPN1-211ENST00000527739 TRPM5Q9NZQ8 1165 aa20.53■□□□□ 0.88
CAPN1-211ENST00000527739 PATJQ8NI35 1801 aa20.53■□□□□ 0.88
CAPN1-211ENST00000527739 OTOGLQ3ZCN5 2332 aa20.52■□□□□ 0.88
CAPN1-211ENST00000527739 C2orf78A6NCI8 922 aa20.52■□□□□ 0.88
CAPN1-211ENST00000527739 SOBPA7XYQ1 873 aa20.52■□□□□ 0.88
CAPN1-211ENST00000527739 AKAP3O75969 853 aa20.52■□□□□ 0.88
CAPN1-211ENST00000527739 CTHP32929 405 aa20.52■□□□□ 0.88
CAPN1-211ENST00000527739 PIK3CAP42336 1068 aa20.52■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms