RNA–Protein interactions for RNA: ENST00000527243.5

CTSB-214, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 580 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-214ENST00000527243 TATDN2Q93075 761 aa11.94□□□□□ -0.5
CTSB-214ENST00000527243 TRMT2BQ96GJ1 504 aaKnown RBP11.94□□□□□ -0.5
CTSB-214ENST00000527243 SPATA17Q96L03 361 aa11.94□□□□□ -0.5
CTSB-214ENST00000527243 ASB16Q96NS5 453 aa11.94□□□□□ -0.5
CTSB-214ENST00000527243 IMPG2Q9BZV3 1241 aa11.94□□□□□ -0.5
CTSB-214ENST00000527243 ZNF518BQ9C0D4 1074 aa11.94□□□□□ -0.5
CTSB-214ENST00000527243 FAM124BQ9H5Z6 455 aaPredicted RBP11.94□□□□□ -0.5
CTSB-214ENST00000527243 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.94□□□□□ -0.51e-12■■■■■ 46.1
CTSB-214ENST00000527243 MAGEC2Q9UBF1 373 aaPredicted RBP11.94□□□□□ -0.5
CTSB-214ENST00000527243 NCANO14594 1321 aa11.93□□□□□ -0.5
CTSB-214ENST00000527243 TMEM221A6NGB7 291 aa11.93□□□□□ -0.5
CTSB-214ENST00000527243 SLC38A8A6NNN8 435 aa11.93□□□□□ -0.5
CTSB-214ENST00000527243 PRR33A8MZF0 331 aa11.93□□□□□ -0.5
CTSB-214ENST00000527243 ESPNB1AK53 854 aa11.93□□□□□ -0.5
CTSB-214ENST00000527243 M0R296 226 aa11.93□□□□□ -0.5
CTSB-214ENST00000527243 CLDN5O00501 218 aa11.93□□□□□ -0.5
CTSB-214ENST00000527243 P4HA2O15460 535 aa11.93□□□□□ -0.5
CTSB-214ENST00000527243 NARSO43776 548 aaKnown RBP11.93□□□□□ -0.5
CTSB-214ENST00000527243 SRFP11831 508 aa11.93□□□□□ -0.5
CTSB-214ENST00000527243 GABRR2P28476 465 aa11.93□□□□□ -0.5
CTSB-214ENST00000527243 ERCC5P28715 1186 aaPredicted RBP11.93□□□□□ -0.5
CTSB-214ENST00000527243 WEE1P30291 646 aa11.93□□□□□ -0.5
CTSB-214ENST00000527243 TYRO3Q06418 890 aa11.93□□□□□ -0.5
CTSB-214ENST00000527243 CT47A1Q5JQC4 288 aaPredicted RBP11.93□□□□□ -0.5
CTSB-214ENST00000527243 STXBP5Q5T5C0 1151 aa11.93□□□□□ -0.5
CTSB-214ENST00000527243 TANGO2Q6ICL3 276 aa11.93□□□□□ -0.5
CTSB-214ENST00000527243 ACOT1Q86TX2 421 aa11.93□□□□□ -0.5
CTSB-214ENST00000527243 FAM35AQ86V20 835 aa11.93□□□□□ -0.5
CTSB-214ENST00000527243 FUKQ8N0W3 1084 aa11.93□□□□□ -0.5
CTSB-214ENST00000527243 ST13P5Q8NFI4 369 aaPredicted RBP11.93□□□□□ -0.5
CTSB-214ENST00000527243 TNIP3Q96KP6 325 aa11.93□□□□□ -0.5
CTSB-214ENST00000527243 C8orf48Q96LL4 319 aa11.93□□□□□ -0.5
CTSB-214ENST00000527243 ARID3AQ99856 593 aa11.93□□□□□ -0.5
CTSB-214ENST00000527243 TTLL2Q9BWV7 592 aa11.93□□□□□ -0.5
CTSB-214ENST00000527243 PLA2G2FQ9BZM2 168 aa11.93□□□□□ -0.5
CTSB-214ENST00000527243 GPR88Q9GZN0 384 aa11.93□□□□□ -0.5
CTSB-214ENST00000527243 ELOVL4Q9GZR5 314 aa11.93□□□□□ -0.5
CTSB-214ENST00000527243 SLC2A4RGQ9NR83 387 aa11.93□□□□□ -0.5
CTSB-214ENST00000527243 PTPRDP23468 1912 aa11.93□□□□□ -0.5
CTSB-214ENST00000527243 F8VP50 259 aa11.92□□□□□ -0.5
CTSB-214ENST00000527243 PTMAP06454 111 aaKnown RBP11.92□□□□□ -0.5
CTSB-214ENST00000527243 TPM3P06753 285 aa11.92□□□□□ -0.5
CTSB-214ENST00000527243 MSNP26038 577 aaKnown RBP11.92□□□□□ -0.5
CTSB-214ENST00000527243 CDC25CP30307 473 aa11.92□□□□□ -0.5
CTSB-214ENST00000527243 USP46P62068 366 aa11.92□□□□□ -0.5
CTSB-214ENST00000527243 CYP27A1Q02318 531 aa11.92□□□□□ -0.5
CTSB-214ENST00000527243 KCNH2Q12809 1159 aa11.92□□□□□ -0.5
CTSB-214ENST00000527243 ORC1Q13415 861 aa11.92□□□□□ -0.5
CTSB-214ENST00000527243 HFE2Q6ZVN8 426 aa11.92□□□□□ -0.5
CTSB-214ENST00000527243 ZSCAN30Q86W11 494 aa11.92□□□□□ -0.5
CTSB-214ENST00000527243 SCN4BQ8IWT1 228 aa11.92□□□□□ -0.5
CTSB-214ENST00000527243 CCDC150Q8NCX0 1101 aa11.92□□□□□ -0.5
CTSB-214ENST00000527243 ZMIZ2Q8NF64 920 aa11.92□□□□□ -0.5
CTSB-214ENST00000527243 SMARCD2Q92925 531 aa11.92□□□□□ -0.5
CTSB-214ENST00000527243 ELSPBP1Q96BH3 223 aa11.92□□□□□ -0.5
CTSB-214ENST00000527243 RSPRY1Q96DX4 576 aa11.92□□□□□ -0.5
CTSB-214ENST00000527243 KXD1Q9BQD3 176 aa11.92□□□□□ -0.5
CTSB-214ENST00000527243 NT5C1AQ9BXI3 368 aa11.92□□□□□ -0.5
CTSB-214ENST00000527243 CSNK1G1Q9HCP0 422 aa11.92□□□□□ -0.5
CTSB-214ENST00000527243 IL37Q9NZH6 218 aa11.92□□□□□ -0.5
CTSB-214ENST00000527243 ZNF318Q5VUA4 2279 aa11.91□□□□□ -0.5
CTSB-214ENST00000527243 SOBPA7XYQ1 873 aa11.91□□□□□ -0.5
CTSB-214ENST00000527243 GOLGA6L6A8MZA4 724 aa11.91□□□□□ -0.5
CTSB-214ENST00000527243 TNFRSF10BO14763 440 aa11.91□□□□□ -0.5
CTSB-214ENST00000527243 TRIM66O15016 1216 aa11.91□□□□□ -0.5
CTSB-214ENST00000527243 FGFR1OPO95684 399 aaKnown RBP11.91□□□□□ -0.5
CTSB-214ENST00000527243 CCDC130P13994 396 aa11.91□□□□□ -0.5
CTSB-214ENST00000527243 GRIK1P39086 918 aa11.91□□□□□ -0.5
CTSB-214ENST00000527243 CYP4F8P98187 520 aa11.91□□□□□ -0.5
CTSB-214ENST00000527243 CUL2Q13617 745 aa11.91□□□□□ -0.5
CTSB-214ENST00000527243 STX1AQ16623 288 aa11.91□□□□□ -0.5
CTSB-214ENST00000527243 WDR44Q5JSH3 913 aa11.91□□□□□ -0.5
CTSB-214ENST00000527243 TTC39CQ8N584 583 aa11.91□□□□□ -0.5
CTSB-214ENST00000527243 C12orf29Q8N999 325 aa11.91□□□□□ -0.5
CTSB-214ENST00000527243 ZSCAN18Q8TBC5 510 aaPredicted RBP11.91□□□□□ -0.5
CTSB-214ENST00000527243 CNOT6LQ96LI5 555 aaKnown RBP11.91□□□□□ -0.5
CTSB-214ENST00000527243 LRRC3BQ96PB8 259 aa11.91□□□□□ -0.5
CTSB-214ENST00000527243 HNRNPABQ99729 332 aaKnown RBP11.91□□□□□ -0.5
CTSB-214ENST00000527243 SMOQ99835 787 aa11.91□□□□□ -0.5
CTSB-214ENST00000527243 SLC46A2Q9BY10 475 aa11.91□□□□□ -0.5
CTSB-214ENST00000527243 NAT10Q9H0A0 1025 aaKnown RBP11.91□□□□□ -0.5
CTSB-214ENST00000527243 ATXN3LQ9H3M9 355 aa11.91□□□□□ -0.5
CTSB-214ENST00000527243 TASP1Q9H6P5 420 aa11.91□□□□□ -0.5
CTSB-214ENST00000527243 CISHQ9NSE2 258 aa11.91□□□□□ -0.5
CTSB-214ENST00000527243 ANO10Q9NW15 660 aa11.91□□□□□ -0.5
CTSB-214ENST00000527243 WNT16Q9UBV4 365 aa11.91□□□□□ -0.5
CTSB-214ENST00000527243 ZMYM5Q9UJ78 669 aa11.91□□□□□ -0.5
CTSB-214ENST00000527243 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.91□□□□□ -0.5
CTSB-214ENST00000527243 F5P12259 2224 aa11.9□□□□□ -0.5
CTSB-214ENST00000527243 FAM92AA1XBS5 289 aa11.9□□□□□ -0.5
CTSB-214ENST00000527243 PRAMEF12O95522 483 aa11.9□□□□□ -0.5
CTSB-214ENST00000527243 PDGFBP01127 241 aaPredicted RBP11.9□□□□□ -0.5
CTSB-214ENST00000527243 AFPP02771 609 aaKnown RBP11.9□□□□□ -0.5
CTSB-214ENST00000527243 CD58P19256 250 aa11.9□□□□□ -0.5
CTSB-214ENST00000527243 ACO1P21399 889 aaKnown RBP11.9□□□□□ -0.5
CTSB-214ENST00000527243 DDX6P26196 483 aaKnown RBP eCLIP11.9□□□□□ -0.5
CTSB-214ENST00000527243 VIPR2P41587 438 aa11.9□□□□□ -0.5
CTSB-214ENST00000527243 RAD23BP54727 409 aa11.9□□□□□ -0.5
CTSB-214ENST00000527243 GPC5P78333 572 aa11.9□□□□□ -0.5
CTSB-214ENST00000527243 GPR158Q5T848 1215 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms