RNA–Protein interactions for RNA: ENST00000527046.5

NEDD8-205, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-205ENST00000527046 USP46P62068 366 aa11.43□□□□□ -0.58
NEDD8-205ENST00000527046 YWHAEP62258 255 aaKnown RBP11.43□□□□□ -0.58
NEDD8-205ENST00000527046 NTHL1P78549 312 aa11.43□□□□□ -0.58
NEDD8-205ENST00000527046 CYP27A1Q02318 531 aa11.43□□□□□ -0.58
NEDD8-205ENST00000527046 TFF2Q03403 129 aa11.43□□□□□ -0.58
NEDD8-205ENST00000527046 TWF1Q12792 350 aa11.43□□□□□ -0.58
NEDD8-205ENST00000527046 RAPGEF1Q13905 1077 aa11.43□□□□□ -0.58
NEDD8-205ENST00000527046 MAPRE1Q15691 268 aaKnown RBP11.43□□□□□ -0.58
NEDD8-205ENST00000527046 LCLAT1Q6UWP7 414 aa11.43□□□□□ -0.58
NEDD8-205ENST00000527046 VSTM1Q6UX27 236 aa11.43□□□□□ -0.58
NEDD8-205ENST00000527046 TMC5Q6UXY8 1006 aa11.43□□□□□ -0.58
NEDD8-205ENST00000527046 CLEC20AQ6ZU45 233 aa11.43□□□□□ -0.58
NEDD8-205ENST00000527046 GPRIN1Q7Z2K8 1008 aa11.43□□□□□ -0.58
NEDD8-205ENST00000527046 TMEM150AQ86TG1 271 aa11.43□□□□□ -0.58
NEDD8-205ENST00000527046 NOP9Q86U38 636 aaKnown RBP11.43□□□□□ -0.58
NEDD8-205ENST00000527046 TMC8Q8IU68 726 aa11.43□□□□□ -0.58
NEDD8-205ENST00000527046 GPIHBP1Q8IV16 184 aa11.43□□□□□ -0.58
NEDD8-205ENST00000527046 HS6ST3Q8IZP7 471 aa11.43□□□□□ -0.58
NEDD8-205ENST00000527046 ANKRD52Q8NB46 1076 aa11.43□□□□□ -0.58
NEDD8-205ENST00000527046 SMRP1Q8NCR6 262 aa11.43□□□□□ -0.58
NEDD8-205ENST00000527046 NEK11Q8NG66 645 aa11.43□□□□□ -0.58
NEDD8-205ENST00000527046 SLC35F5Q8WV83 523 aa11.43□□□□□ -0.58
NEDD8-205ENST00000527046 PPP2R3CQ969Q6 453 aa11.43□□□□□ -0.58
NEDD8-205ENST00000527046 C8orf48Q96LL4 319 aa11.43□□□□□ -0.58
NEDD8-205ENST00000527046 DUSP16Q9BY84 665 aa11.43□□□□□ -0.58
NEDD8-205ENST00000527046 ADAM7Q9H2U9 754 aa11.43□□□□□ -0.58
NEDD8-205ENST00000527046 IL21Q9HBE4 155 aa11.43□□□□□ -0.58
NEDD8-205ENST00000527046 ZNF334Q9HCZ1 680 aaPredicted RBP11.43□□□□□ -0.58
NEDD8-205ENST00000527046 HCFC1R1Q9NWW0 138 aa11.43□□□□□ -0.58
NEDD8-205ENST00000527046 ZDHHC7Q9NXF8 308 aa11.43□□□□□ -0.58
NEDD8-205ENST00000527046 AIPL1Q9NZN9 384 aa11.43□□□□□ -0.58
NEDD8-205ENST00000527046 CYTH4Q9UIA0 394 aa11.43□□□□□ -0.58
NEDD8-205ENST00000527046 NOCTQ9UK39 431 aaKnown RBP11.43□□□□□ -0.58
NEDD8-205ENST00000527046 CAPN11Q9UMQ6 739 aa11.43□□□□□ -0.58
NEDD8-205ENST00000527046 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.43□□□□□ -0.58
NEDD8-205ENST00000527046 DAAM1Q9Y4D1 1078 aa11.43□□□□□ -0.58
NEDD8-205ENST00000527046 PATJQ8NI35 1801 aa11.42□□□□□ -0.58
NEDD8-205ENST00000527046 ZNF638Q14966 1978 aaKnown RBP11.42□□□□□ -0.58
NEDD8-205ENST00000527046 F8VP50 259 aa11.42□□□□□ -0.58
NEDD8-205ENST00000527046 CCL16O15467 120 aa11.42□□□□□ -0.58
NEDD8-205ENST00000527046 MBTPS2O43462 519 aa11.42□□□□□ -0.58
NEDD8-205ENST00000527046 GFPT2O94808 682 aa11.42□□□□□ -0.58
NEDD8-205ENST00000527046 CLSTN1O94985 981 aa11.42□□□□□ -0.58
NEDD8-205ENST00000527046 HNRNPA1P09651 372 aaKnown RBP eCLIP11.42□□□□□ -0.58
NEDD8-205ENST00000527046 CYP11B1P15538 503 aa11.42□□□□□ -0.58
NEDD8-205ENST00000527046 HOXB8P17481 243 aaPredicted RBP11.42□□□□□ -0.58
NEDD8-205ENST00000527046 ADORA2BP29275 332 aa11.42□□□□□ -0.58
NEDD8-205ENST00000527046 CCR2P41597 374 aa11.42□□□□□ -0.58
NEDD8-205ENST00000527046 GPD2P43304 727 aa11.42□□□□□ -0.58
NEDD8-205ENST00000527046 RPL34P49207 117 aaKnown RBP11.42□□□□□ -0.58
NEDD8-205ENST00000527046 TUFMP49411 452 aaKnown RBP11.42□□□□□ -0.58
NEDD8-205ENST00000527046 EPHA5P54756 1037 aa11.42□□□□□ -0.58
NEDD8-205ENST00000527046 ARID5BQ14865 1188 aa11.42□□□□□ -0.58
NEDD8-205ENST00000527046 MGAT5BQ3V5L5 792 aa11.42□□□□□ -0.58
NEDD8-205ENST00000527046 SGO2Q562F6 1265 aa11.42□□□□□ -0.58
NEDD8-205ENST00000527046 RARS2Q5T160 578 aaKnown RBP11.42□□□□□ -0.58
NEDD8-205ENST00000527046 HGSNATQ68CP4 663 aa11.42□□□□□ -0.58
NEDD8-205ENST00000527046 DENND1BQ6P3S1 775 aa11.42□□□□□ -0.58
NEDD8-205ENST00000527046 C4orf50Q6ZRC1 276 aa11.42□□□□□ -0.58
NEDD8-205ENST00000527046 CCDC149Q6ZUS6 474 aa11.42□□□□□ -0.58
NEDD8-205ENST00000527046 DNAJB7Q7Z6W7 309 aaPredicted RBP11.42□□□□□ -0.58
NEDD8-205ENST00000527046 SPATA2LQ8IUW3 424 aaPredicted RBP11.42□□□□□ -0.58
NEDD8-205ENST00000527046 UBA3Q8TBC4 463 aa11.42□□□□□ -0.58
NEDD8-205ENST00000527046 GIPC2Q8TF65 315 aa11.42□□□□□ -0.58
NEDD8-205ENST00000527046 HLA-CQ95604 372 aa11.42□□□□□ -0.58
NEDD8-205ENST00000527046 MYRFLQ96LU7 910 aa11.42□□□□□ -0.58
NEDD8-205ENST00000527046 PCDHB18PQ96TA0 734 aa11.42□□□□□ -0.58
NEDD8-205ENST00000527046 TSPAN16Q9UKR8 245 aa11.42□□□□□ -0.58
NEDD8-205ENST00000527046 EYSQ5T1H1 3165 aa11.42□□□□□ -0.58
NEDD8-205ENST00000527046 DENND4CQ5VZ89 1909 aa11.41□□□□□ -0.58
NEDD8-205ENST00000527046 A0A1W2PQJ5 194 aa11.41□□□□□ -0.58
NEDD8-205ENST00000527046 FAM92AA1XBS5 289 aa11.41□□□□□ -0.58
NEDD8-205ENST00000527046 LRRC53A6NM62 1247 aa11.41□□□□□ -0.58
NEDD8-205ENST00000527046 PRRG1O14668 218 aa11.41□□□□□ -0.58
NEDD8-205ENST00000527046 MICAL2O94851 1124 aa11.41□□□□□ -0.58
NEDD8-205ENST00000527046 F11P03951 625 aa11.41□□□□□ -0.58
NEDD8-205ENST00000527046 KRT5P13647 590 aa11.41□□□□□ -0.58
NEDD8-205ENST00000527046 KCNA5P22460 613 aa11.41□□□□□ -0.58
NEDD8-205ENST00000527046 CASP14P31944 242 aa11.41□□□□□ -0.58
NEDD8-205ENST00000527046 ELF1P32519 619 aa11.41□□□□□ -0.58
NEDD8-205ENST00000527046 USP8P40818 1118 aa11.41□□□□□ -0.58
NEDD8-205ENST00000527046 STAT1P42224 750 aa11.41□□□□□ -0.58
NEDD8-205ENST00000527046 MAP3K7CLP57077 242 aa11.41□□□□□ -0.58
NEDD8-205ENST00000527046 PDE4CQ08493 712 aa11.41□□□□□ -0.58
NEDD8-205ENST00000527046 GOLGA8FQ08AF8 430 aa11.41□□□□□ -0.58
NEDD8-205ENST00000527046 GOLGA8DPQ0D2H9 430 aa11.41□□□□□ -0.58
NEDD8-205ENST00000527046 CLUL1Q15846 466 aa11.41□□□□□ -0.58
NEDD8-205ENST00000527046 SLC5A9Q2M3M2 681 aa11.41□□□□□ -0.58
NEDD8-205ENST00000527046 GOLGA7BQ2TAP0 167 aa11.41□□□□□ -0.58
NEDD8-205ENST00000527046 LEXMQ3ZCV2 418 aa11.41□□□□□ -0.58
NEDD8-205ENST00000527046 RAB41Q5JT25 222 aa11.41□□□□□ -0.58
NEDD8-205ENST00000527046 PRSS36Q5K4E3 855 aa11.41□□□□□ -0.58
NEDD8-205ENST00000527046 PPM1LQ5SGD2 360 aa11.41□□□□□ -0.58
NEDD8-205ENST00000527046 PMF1Q6P1K2 205 aa11.41□□□□□ -0.58
NEDD8-205ENST00000527046 WDR59Q6PJI9 974 aa11.41□□□□□ -0.58
NEDD8-205ENST00000527046 GAREM2Q75VX8 874 aa11.41□□□□□ -0.58
NEDD8-205ENST00000527046 BHLHA9Q7RTU4 235 aa11.41□□□□□ -0.58
NEDD8-205ENST00000527046 SCAMP5Q8TAC9 235 aa11.41□□□□□ -0.58
NEDD8-205ENST00000527046 EPS8L1Q8TE68 723 aa11.41□□□□□ -0.58
NEDD8-205ENST00000527046 SLC20A1Q8WUM9 679 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms