RNA–Protein interactions for RNA: ENST00000526150.1

COLCA1-202, Transcript of colorectal cancer associated 1, humanhuman

TSL 2

Gene COLCA1, Length 391 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-202ENST00000526150 GPR15P49685 360 aa13.05□□□□□ -0.32
COLCA1-202ENST00000526150 AMPD3Q01432 767 aa13.05□□□□□ -0.32
COLCA1-202ENST00000526150 KCNA1Q09470 495 aa13.05□□□□□ -0.32
COLCA1-202ENST00000526150 USP4Q13107 963 aa13.05□□□□□ -0.32
COLCA1-202ENST00000526150 PSMD2Q13200 908 aa13.05□□□□□ -0.32
COLCA1-202ENST00000526150 CUL4AQ13619 759 aa13.05□□□□□ -0.32
COLCA1-202ENST00000526150 ZNF77Q15935 545 aa13.05□□□□□ -0.32
COLCA1-202ENST00000526150 SDHAF4Q5VUM1 108 aa13.05□□□□□ -0.32
COLCA1-202ENST00000526150 FAM171BQ6P995 826 aa13.05□□□□□ -0.32
COLCA1-202ENST00000526150 KBTBD6Q86V97 674 aa13.05□□□□□ -0.32
COLCA1-202ENST00000526150 TTC16Q8NEE8 873 aa13.05□□□□□ -0.32
COLCA1-202ENST00000526150 RPLP0P6Q8NHW5 317 aa13.05□□□□□ -0.32
COLCA1-202ENST00000526150 HPDLQ96IR7 371 aa13.05□□□□□ -0.32
COLCA1-202ENST00000526150 SPATA17Q96L03 361 aa13.05□□□□□ -0.32
COLCA1-202ENST00000526150 SYT15Q9BQS2 421 aa13.05□□□□□ -0.32
COLCA1-202ENST00000526150 ZSCAN16Q9H4T2 348 aaPredicted RBP13.05□□□□□ -0.32
COLCA1-202ENST00000526150 PCIF1Q9H4Z3 704 aa13.05□□□□□ -0.32
COLCA1-202ENST00000526150 PDE11AQ9HCR9 933 aa13.05□□□□□ -0.32
COLCA1-202ENST00000526150 INTS13Q9NVM9 706 aa13.05□□□□□ -0.32
COLCA1-202ENST00000526150 TRPM5Q9NZQ8 1165 aa13.05□□□□□ -0.32
COLCA1-202ENST00000526150 OBSL1O75147 1896 aa13.05□□□□□ -0.32
COLCA1-202ENST00000526150 FRMD3A2A2Y4 597 aa13.04□□□□□ -0.32
COLCA1-202ENST00000526150 OTOL1A6NHN0 477 aaPredicted RBP13.04□□□□□ -0.32
COLCA1-202ENST00000526150 SLC9A3R1O14745 358 aaPredicted RBP13.04□□□□□ -0.32
COLCA1-202ENST00000526150 TRIM66O15016 1216 aa13.04□□□□□ -0.32
COLCA1-202ENST00000526150 PRPF6O94906 941 aaKnown RBP13.04□□□□□ -0.32
COLCA1-202ENST00000526150 KCNA4P22459 653 aa13.04□□□□□ -0.32
COLCA1-202ENST00000526150 GRIK1P39086 918 aa13.04□□□□□ -0.32
COLCA1-202ENST00000526150 MPLP40238 635 aa13.04□□□□□ -0.32
COLCA1-202ENST00000526150 DMC1Q14565 340 aa13.04□□□□□ -0.32
COLCA1-202ENST00000526150 SLC39A14Q15043 492 aa13.04□□□□□ -0.32
COLCA1-202ENST00000526150 SOWAHAQ2M3V2 549 aa13.04□□□□□ -0.32
COLCA1-202ENST00000526150 EML3Q32P44 896 aa13.04□□□□□ -0.32
COLCA1-202ENST00000526150 USP39Q53GS9 565 aaKnown RBP13.04□□□□□ -0.32
COLCA1-202ENST00000526150 PKN3Q6P5Z2 889 aa13.04□□□□□ -0.32
COLCA1-202ENST00000526150 DENND5BQ6ZUT9 1274 aa13.04□□□□□ -0.32
COLCA1-202ENST00000526150 ARL14EPQ8N8R7 260 aaPredicted RBP13.04□□□□□ -0.32
COLCA1-202ENST00000526150 SH3RF2Q8TEC5 729 aa13.04□□□□□ -0.32
COLCA1-202ENST00000526150 CHFRQ96EP1 664 aa13.04□□□□□ -0.32
COLCA1-202ENST00000526150 CLIC6Q96NY7 704 aa13.04□□□□□ -0.32
COLCA1-202ENST00000526150 CYP2S1Q96SQ9 504 aa13.04□□□□□ -0.32
COLCA1-202ENST00000526150 MMS19Q96T76 1030 aa13.04□□□□□ -0.32
COLCA1-202ENST00000526150 PKMYT1Q99640 499 aa13.04□□□□□ -0.32
COLCA1-202ENST00000526150 CBWD1Q9BRT8 395 aa13.04□□□□□ -0.32
COLCA1-202ENST00000526150 MTMR12Q9C0I1 747 aa13.04□□□□□ -0.32
COLCA1-202ENST00000526150 IKZF4Q9H2S9 585 aa13.04□□□□□ -0.32
COLCA1-202ENST00000526150 CUEDC2Q9H467 287 aa13.04□□□□□ -0.32
COLCA1-202ENST00000526150 ANGPTL2Q9UKU9 493 aa13.04□□□□□ -0.32
COLCA1-202ENST00000526150 ARHGAP26Q9UNA1 814 aa13.04□□□□□ -0.32
COLCA1-202ENST00000526150 CNOT1A5YKK6 2376 aaKnown RBP13.04□□□□□ -0.32
COLCA1-202ENST00000526150 TADA3O75528 432 aa13.03□□□□□ -0.32
COLCA1-202ENST00000526150 CASP5P51878 434 aa13.03□□□□□ -0.32
COLCA1-202ENST00000526150 DGKEP52429 567 aa13.03□□□□□ -0.32
COLCA1-202ENST00000526150 SNRPFP62306 86 aaKnown RBP13.03□□□□□ -0.32
COLCA1-202ENST00000526150 CEBPZQ03701 1054 aaKnown RBP13.03□□□□□ -0.32
COLCA1-202ENST00000526150 SF3A2Q15428 464 aaKnown RBP13.03□□□□□ -0.32
COLCA1-202ENST00000526150 ST3GAL2Q16842 350 aa13.03□□□□□ -0.32
COLCA1-202ENST00000526150 PLK5Q496M5 336 aa13.03□□□□□ -0.32
COLCA1-202ENST00000526150 PLA2G2CQ5R387 149 aa13.03□□□□□ -0.32
COLCA1-202ENST00000526150 STPG1Q5TH74 334 aa13.03□□□□□ -0.32
COLCA1-202ENST00000526150 OSTM1Q86WC4 334 aa13.03□□□□□ -0.32
COLCA1-202ENST00000526150 DDX42Q86XP3 938 aaKnown RBP eCLIP13.03□□□□□ -0.32
COLCA1-202ENST00000526150 WDR49Q8IV35 697 aa13.03□□□□□ -0.32
COLCA1-202ENST00000526150 TSTD1Q8NFU3 115 aa13.03□□□□□ -0.32
COLCA1-202ENST00000526150 CXorf38Q8TB03 319 aa13.03□□□□□ -0.32
COLCA1-202ENST00000526150 HHIPQ96QV1 700 aa13.03□□□□□ -0.32
COLCA1-202ENST00000526150 FNBP1Q96RU3 617 aa13.03□□□□□ -0.32
COLCA1-202ENST00000526150 TNMDQ9H2S6 317 aa13.03□□□□□ -0.32
COLCA1-202ENST00000526150 SNX25Q9H3E2 840 aa13.03□□□□□ -0.32
COLCA1-202ENST00000526150 FBRSL1Q9HCM7 1045 aaKnown RBP13.03□□□□□ -0.32
COLCA1-202ENST00000526150 GCNT4Q9P109 453 aa13.03□□□□□ -0.32
COLCA1-202ENST00000526150 SIX4Q9UIU6 781 aa13.03□□□□□ -0.32
COLCA1-202ENST00000526150 WNT6Q9Y6F9 365 aa13.03□□□□□ -0.32
COLCA1-202ENST00000526150 EPG5Q9HCE0 2579 aa13.03□□□□□ -0.32
COLCA1-202ENST00000526150 EIF3DO15371 548 aaKnown RBP eCLIP13.02□□□□□ -0.33
COLCA1-202ENST00000526150 ALDH1A2O94788 518 aa13.02□□□□□ -0.33
COLCA1-202ENST00000526150 SYT1P21579 422 aa13.02□□□□□ -0.33
COLCA1-202ENST00000526150 WARSP23381 471 aaKnown RBP13.02□□□□□ -0.33
COLCA1-202ENST00000526150 BDNFP23560 247 aa13.02□□□□□ -0.33
COLCA1-202ENST00000526150 GBP1P32455 592 aa13.02□□□□□ -0.33
COLCA1-202ENST00000526150 WNT7BP56706 349 aa13.02□□□□□ -0.33
COLCA1-202ENST00000526150 CYP27A1Q02318 531 aa13.02□□□□□ -0.33
COLCA1-202ENST00000526150 HSF5Q4G112 596 aaPredicted RBP13.02□□□□□ -0.33
COLCA1-202ENST00000526150 PREPLQ4J6C6 727 aaPredicted RBP13.02□□□□□ -0.33
COLCA1-202ENST00000526150 TDRD10Q5VZ19 366 aaKnown RBP13.02□□□□□ -0.33
COLCA1-202ENST00000526150 RNF43Q68DV7 783 aa13.02□□□□□ -0.33
COLCA1-202ENST00000526150 STKLD1Q8NE28 680 aa13.02□□□□□ -0.33
COLCA1-202ENST00000526150 ZSWIM2Q8NEG5 633 aa13.02□□□□□ -0.33
COLCA1-202ENST00000526150 MYCBPAPQ8TBZ2 947 aa13.02□□□□□ -0.33
COLCA1-202ENST00000526150 INTS4Q96HW7 963 aaKnown RBP13.02□□□□□ -0.33
COLCA1-202ENST00000526150 SLITRK1Q96PX8 696 aa13.02□□□□□ -0.33
COLCA1-202ENST00000526150 PANK2Q9BZ23 570 aa13.02□□□□□ -0.33
COLCA1-202ENST00000526150 DUSP15Q9H1R2 295 aaPredicted RBP13.02□□□□□ -0.33
COLCA1-202ENST00000526150 ANAPC1Q9H1A4 1944 aa13.01□□□□□ -0.33
COLCA1-202ENST00000526150 C2orf78A6NCI8 922 aa13.01□□□□□ -0.33
COLCA1-202ENST00000526150 TACC1O75410 805 aa13.01□□□□□ -0.33
COLCA1-202ENST00000526150 CAVIN2O95810 425 aa13.01□□□□□ -0.33
COLCA1-202ENST00000526150 PDGFRBP09619 1106 aa13.01□□□□□ -0.33
COLCA1-202ENST00000526150 TNNI1P19237 187 aa13.01□□□□□ -0.33
COLCA1-202ENST00000526150 GNL1P36915 607 aaPredicted RBP13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms