RNA–Protein interactions for RNA: ENST00000525469.1

CD44-218, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 705 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-218ENST00000525469 ERMNQ8TAM6 284 aa5.38□□□□□ -1.55
CD44-218ENST00000525469 ATP8B4Q8TF62 1192 aa5.38□□□□□ -1.55
CD44-218ENST00000525469 ATRIPQ8WXE1 791 aa5.38□□□□□ -1.55
CD44-218ENST00000525469 CASP10Q92851 521 aa5.38□□□□□ -1.55
CD44-218ENST00000525469 ACSF2Q96CM8 615 aaPredicted RBP5.38□□□□□ -1.55
CD44-218ENST00000525469 THOC1Q96FV9 657 aaKnown RBP5.38□□□□□ -1.55
CD44-218ENST00000525469 CRELD1Q96HD1 420 aa5.38□□□□□ -1.55
CD44-218ENST00000525469 HRASLS5Q96KN8 279 aa5.38□□□□□ -1.55
CD44-218ENST00000525469 PANX2Q96RD6 677 aa5.38□□□□□ -1.55
CD44-218ENST00000525469 NAPGQ99747 312 aaPredicted RBP5.38□□□□□ -1.55
CD44-218ENST00000525469 MAK16Q9BXY0 300 aaKnown RBP5.38□□□□□ -1.55
CD44-218ENST00000525469 CCDC8Q9H0W5 538 aaPredicted RBP5.38□□□□□ -1.55
CD44-218ENST00000525469 S1PR5Q9H228 398 aa5.38□□□□□ -1.55
CD44-218ENST00000525469 CENPHQ9H3R5 247 aa5.38□□□□□ -1.55
CD44-218ENST00000525469 ZNF287Q9HBT7 754 aa5.38□□□□□ -1.55
CD44-218ENST00000525469 SLC40A1Q9NP59 571 aa5.38□□□□□ -1.55
CD44-218ENST00000525469 DMAP1Q9NPF5 467 aaPredicted RBP5.38□□□□□ -1.55
CD44-218ENST00000525469 CTTNBP2NLQ9P2B4 639 aa5.38□□□□□ -1.55
CD44-218ENST00000525469 GMEB2Q9UKD1 530 aa5.38□□□□□ -1.55
CD44-218ENST00000525469 VAV3Q9UKW4 847 aa5.38□□□□□ -1.55
CD44-218ENST00000525469 TPX2Q9ULW0 747 aaKnown RBP5.38□□□□□ -1.55
CD44-218ENST00000525469 MTMR6Q9Y217 621 aa5.38□□□□□ -1.55
CD44-218ENST00000525469 TMED5Q9Y3A6 229 aa5.38□□□□□ -1.55
CD44-218ENST00000525469 MRPL42Q9Y6G3 142 aaKnown RBP5.38□□□□□ -1.55
CD44-218ENST00000525469 CNOT1A5YKK6 2376 aaKnown RBP5.38□□□□□ -1.55
CD44-218ENST00000525469 ZFHX4Q86UP3 3567 aa5.38□□□□□ -1.55
CD44-218ENST00000525469 FRYLO94915 3013 aa5.37□□□□□ -1.55
CD44-218ENST00000525469 FNDC1Q4ZHG4 1894 aaPredicted RBP5.37□□□□□ -1.55
CD44-218ENST00000525469 hCG_2014768A0A024R1R8 64 aa5.37□□□□□ -1.55
CD44-218ENST00000525469 A0A1W2PQ27 194 aa5.37□□□□□ -1.55
CD44-218ENST00000525469 A0A1W2PQ64 194 aa5.37□□□□□ -1.55
CD44-218ENST00000525469 A0A1W2PQD8 194 aa5.37□□□□□ -1.55
CD44-218ENST00000525469 GOLGA8AA7E2F4 631 aa5.37□□□□□ -1.55
CD44-218ENST00000525469 IPO5O00410 1097 aaKnown RBP5.37□□□□□ -1.55
CD44-218ENST00000525469 BIN1O00499 593 aa5.37□□□□□ -1.55
CD44-218ENST00000525469 PRPF3O43395 683 aaKnown RBP5.37□□□□□ -1.55
CD44-218ENST00000525469 SORBS3O60504 671 aa5.37□□□□□ -1.55
CD44-218ENST00000525469 SURF6O75683 361 aaKnown RBP5.37□□□□□ -1.55
CD44-218ENST00000525469 DGKIO75912 1065 aa5.37□□□□□ -1.55
CD44-218ENST00000525469 MBD4O95243 580 aa5.37□□□□□ -1.55
CD44-218ENST00000525469 GNAI2P04899 355 aa5.37□□□□□ -1.55
CD44-218ENST00000525469 ICAM1P05362 532 aa5.37□□□□□ -1.55
CD44-218ENST00000525469 LINC00271P0C7V0 271 aa5.37□□□□□ -1.55
CD44-218ENST00000525469 ZNF286BP0CG31 522 aa5.37□□□□□ -1.55
CD44-218ENST00000525469 STAG3L1P0CL83 205 aa5.37□□□□□ -1.55
CD44-218ENST00000525469 GNAT1P11488 350 aa5.37□□□□□ -1.55
CD44-218ENST00000525469 CPA3P15088 417 aa5.37□□□□□ -1.55
CD44-218ENST00000525469 IBSPP21815 317 aaPredicted RBP5.37□□□□□ -1.55
CD44-218ENST00000525469 TNFRSF8P28908 595 aa5.37□□□□□ -1.55
CD44-218ENST00000525469 GJB2P29033 226 aa5.37□□□□□ -1.55
CD44-218ENST00000525469 GBP1P32455 592 aa5.37□□□□□ -1.55
CD44-218ENST00000525469 ACADVLP49748 655 aa5.37□□□□□ -1.55
CD44-218ENST00000525469 RING1Q06587 406 aa5.37□□□□□ -1.55
CD44-218ENST00000525469 ZBTB17Q13105 803 aa5.37□□□□□ -1.55
CD44-218ENST00000525469 TDGQ13569 410 aa5.37□□□□□ -1.55
CD44-218ENST00000525469 CUL4BQ13620 913 aa5.37□□□□□ -1.55
CD44-218ENST00000525469 TRIM14Q14142 442 aa5.37□□□□□ -1.55
CD44-218ENST00000525469 KCNB1Q14721 858 aa5.37□□□□□ -1.55
CD44-218ENST00000525469 KRT72Q14CN4 511 aa5.37□□□□□ -1.55
CD44-218ENST00000525469 PLCL1Q15111 1095 aa5.37□□□□□ -1.55
CD44-218ENST00000525469 NONOQ15233 471 aaKnown RBP eCLIP5.37□□□□□ -1.55
CD44-218ENST00000525469 WIPI1Q5MNZ9 446 aaPredicted RBP5.37□□□□□ -1.55
CD44-218ENST00000525469 ATAT1Q5SQI0 421 aa5.37□□□□□ -1.55
CD44-218ENST00000525469 RNF187Q5TA31 235 aaPredicted RBP5.37□□□□□ -1.55
CD44-218ENST00000525469 SPECC1LQ69YQ0 1117 aa5.37□□□□□ -1.55
CD44-218ENST00000525469 SYCE2Q6PIF2 218 aa5.37□□□□□ -1.55
CD44-218ENST00000525469 TMEM184AQ6ZMB5 413 aa5.37□□□□□ -1.55
CD44-218ENST00000525469 BZW1Q7L1Q6 419 aaKnown RBP5.37□□□□□ -1.55
CD44-218ENST00000525469 C1orf210Q8IVY1 113 aa5.37□□□□□ -1.55
CD44-218ENST00000525469 ELOA2Q8IYF1 753 aaPredicted RBP5.37□□□□□ -1.55
CD44-218ENST00000525469 THNSL1Q8IYQ7 743 aa5.37□□□□□ -1.55
CD44-218ENST00000525469 EIF1ADQ8N9N8 165 aaKnown RBP5.37□□□□□ -1.55
CD44-218ENST00000525469 MFSD2AQ8NA29 543 aa5.37□□□□□ -1.55
CD44-218ENST00000525469 SMYD1Q8NB12 490 aa5.37□□□□□ -1.55
CD44-218ENST00000525469 SUMF1Q8NBK3 374 aa5.37□□□□□ -1.55
CD44-218ENST00000525469 ATL2Q8NHH9 583 aa5.37□□□□□ -1.55
CD44-218ENST00000525469 PARD3BQ8TEW8 1205 aa5.37□□□□□ -1.55
CD44-218ENST00000525469 BCL7CQ8WUZ0 217 aaPredicted RBP5.37□□□□□ -1.55
CD44-218ENST00000525469 IRGQQ8WZA9 623 aa5.37□□□□□ -1.55
CD44-218ENST00000525469 DDX1Q92499 740 aaKnown RBP5.37□□□□□ -1.55
CD44-218ENST00000525469 GAL3ST3Q96A11 431 aa5.37□□□□□ -1.55
CD44-218ENST00000525469 ZNF653Q96CK0 615 aa5.37□□□□□ -1.55
CD44-218ENST00000525469 ZNF689Q96CS4 500 aaPredicted RBP5.37□□□□□ -1.55
CD44-218ENST00000525469 ZBTB10Q96DT7 871 aa5.37□□□□□ -1.55
CD44-218ENST00000525469 PLPPR2Q96GM1 343 aa5.37□□□□□ -1.55
CD44-218ENST00000525469 COX4I2Q96KJ9 171 aa5.37□□□□□ -1.55
CD44-218ENST00000525469 TSGA10Q9BZW7 698 aa5.37□□□□□ -1.55
CD44-218ENST00000525469 MMADHCQ9H3L0 296 aaPredicted RBP5.37□□□□□ -1.55
CD44-218ENST00000525469 POMKQ9H5K3 350 aa5.37□□□□□ -1.55
CD44-218ENST00000525469 ZWILCHQ9H900 591 aa5.37□□□□□ -1.55
CD44-218ENST00000525469 ERVK-5Q9HDB9 667 aa5.37□□□□□ -1.55
CD44-218ENST00000525469 CYP26B1Q9NR63 512 aa5.37□□□□□ -1.55
CD44-218ENST00000525469 TMEM260Q9NX78 707 aa5.37□□□□□ -1.55
CD44-218ENST00000525469 ATXN10Q9UBB4 475 aa5.37□□□□□ -1.55
CD44-218ENST00000525469 ARPP21Q9UBL0 812 aaPredicted RBP5.37□□□□□ -1.55
CD44-218ENST00000525469 PUF60Q9UHX1 559 aaKnown RBP5.37□□□□□ -1.55
CD44-218ENST00000525469 ADGRE2Q9UHX3 823 aa5.37□□□□□ -1.55
CD44-218ENST00000525469 DBNLQ9UJU6 430 aaKnown RBP5.37□□□□□ -1.55
CD44-218ENST00000525469 HPCAL4Q9UM19 191 aa5.37□□□□□ -1.55
CD44-218ENST00000525469 RPL26L1Q9UNX3 145 aaKnown RBP5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms