RNA–Protein interactions for RNA: ENST00000524922.1

CD44-212, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 352 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-212ENST00000524922 TARM1B6A8C7 271 aa2.28□□□□□ -2.04
CD44-212ENST00000524922 GCOM1H8Y6P7 765 aaPredicted RBP2.28□□□□□ -2.04
CD44-212ENST00000524922 GABRDO14764 452 aa2.28□□□□□ -2.04
CD44-212ENST00000524922 ADAMTS3O15072 1205 aa2.28□□□□□ -2.04
CD44-212ENST00000524922 URI1O94763 535 aaPredicted RBP2.28□□□□□ -2.04
CD44-212ENST00000524922 ANXA1P04083 346 aa2.28□□□□□ -2.04
CD44-212ENST00000524922 MALP21145 153 aa2.28□□□□□ -2.04
CD44-212ENST00000524922 KLF9Q13886 244 aaPredicted RBP2.28□□□□□ -2.04
CD44-212ENST00000524922 IDI1Q13907 227 aa2.28□□□□□ -2.04
CD44-212ENST00000524922 HABP2Q14520 560 aaPredicted RBP2.28□□□□□ -2.04
CD44-212ENST00000524922 ODF1Q14990 250 aa2.28□□□□□ -2.04
CD44-212ENST00000524922 LLGL1Q15334 1064 aa2.28□□□□□ -2.04
CD44-212ENST00000524922 CCDC93Q567U6 631 aa2.28□□□□□ -2.04
CD44-212ENST00000524922 KRTAP5-11Q6L8G4 156 aa2.28□□□□□ -2.04
CD44-212ENST00000524922 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.28□□□□□ -2.04
CD44-212ENST00000524922 TAF2Q6P1X5 1199 aa2.28□□□□□ -2.04
CD44-212ENST00000524922 NECAB2Q7Z6G3 386 aa2.28□□□□□ -2.04
CD44-212ENST00000524922 SLC17A8Q8NDX2 589 aa2.28□□□□□ -2.04
CD44-212ENST00000524922 SCAMP4Q969E2 229 aa2.28□□□□□ -2.04
CD44-212ENST00000524922 CLPTM1LQ96KA5 538 aa2.28□□□□□ -2.04
CD44-212ENST00000524922 TEKT5Q96M29 485 aa2.28□□□□□ -2.04
CD44-212ENST00000524922 TRIB1Q96RU8 372 aa2.28□□□□□ -2.04
CD44-212ENST00000524922 HAPLN3Q96S86 360 aa2.28□□□□□ -2.04
CD44-212ENST00000524922 PACSIN1Q9BY11 444 aa2.28□□□□□ -2.04
CD44-212ENST00000524922 SLC29A3Q9BZD2 475 aa2.28□□□□□ -2.04
CD44-212ENST00000524922 SIDT1Q9NXL6 827 aaKnown RBP2.28□□□□□ -2.04
CD44-212ENST00000524922 RREB1Q92766 1687 aa2.28□□□□□ -2.05
CD44-212ENST00000524922 THSD7AQ9UPZ6 1657 aa2.28□□□□□ -2.05
CD44-212ENST00000524922 USP32Q8NFA0 1604 aa2.28□□□□□ -2.05
CD44-212ENST00000524922 C10orf71Q711Q0 1435 aa2.27□□□□□ -2.05
CD44-212ENST00000524922 PTPRUQ92729 1446 aa2.27□□□□□ -2.05
CD44-212ENST00000524922 A0A0B4J269 797 aa2.27□□□□□ -2.05
CD44-212ENST00000524922 LRRC14BA6NHZ5 514 aa2.27□□□□□ -2.05
CD44-212ENST00000524922 MYO1FO00160 1098 aa2.27□□□□□ -2.05
CD44-212ENST00000524922 TOR1BO14657 336 aa2.27□□□□□ -2.05
CD44-212ENST00000524922 MOSPD3O75425 235 aa2.27□□□□□ -2.05
CD44-212ENST00000524922 PRR35P0CG20 571 aa2.27□□□□□ -2.05
CD44-212ENST00000524922 PRDX5P30044 214 aa2.27□□□□□ -2.05
CD44-212ENST00000524922 NDUFV1P49821 464 aa2.27□□□□□ -2.05
CD44-212ENST00000524922 PRELPP51888 382 aa2.27□□□□□ -2.05
CD44-212ENST00000524922 EXOSC10Q01780 885 aaKnown RBP2.27□□□□□ -2.05
CD44-212ENST00000524922 PIGFQ07326 219 aa2.27□□□□□ -2.05
CD44-212ENST00000524922 SLC10A2Q12908 348 aaPredicted RBP2.27□□□□□ -2.05
CD44-212ENST00000524922 TUBB3Q13509 450 aa2.27□□□□□ -2.05
CD44-212ENST00000524922 MTMR1Q13613 665 aa2.27□□□□□ -2.05
CD44-212ENST00000524922 PCBP2Q15366 365 aaKnown RBP eCLIP2.27□□□□□ -2.05
CD44-212ENST00000524922 ATP2B3Q16720 1220 aa2.27□□□□□ -2.05
CD44-212ENST00000524922 SLC44A4Q53GD3 710 aa2.27□□□□□ -2.05
CD44-212ENST00000524922 TAF7LQ5H9L4 462 aa2.27□□□□□ -2.05
CD44-212ENST00000524922 MTX3Q5HYI7 312 aa2.27□□□□□ -2.05
CD44-212ENST00000524922 CT47A1Q5JQC4 288 aaPredicted RBP2.27□□□□□ -2.05
CD44-212ENST00000524922 VPS53Q5VIR6 699 aa2.27□□□□□ -2.05
CD44-212ENST00000524922 SLC4A10Q6U841 1118 aa2.27□□□□□ -2.05
CD44-212ENST00000524922 MIGA2Q7L4E1 593 aa2.27□□□□□ -2.05
CD44-212ENST00000524922 KRT27Q7Z3Y8 459 aa2.27□□□□□ -2.05
CD44-212ENST00000524922 NEK8Q86SG6 692 aa2.27□□□□□ -2.05
CD44-212ENST00000524922 RSPH3Q86UC2 560 aa2.27□□□□□ -2.05
CD44-212ENST00000524922 PSD4Q8NDX1 1056 aa2.27□□□□□ -2.05
CD44-212ENST00000524922 ZC3H10Q96K80 434 aaKnown RBP2.27□□□□□ -2.05
CD44-212ENST00000524922 CAMKK2Q96RR4 588 aa2.27□□□□□ -2.05
CD44-212ENST00000524922 VRK1Q99986 396 aaPredicted RBP2.27□□□□□ -2.05
CD44-212ENST00000524922 ALG8Q9BVK2 526 aa2.27□□□□□ -2.05
CD44-212ENST00000524922 RLIMQ9NVW2 624 aa2.27□□□□□ -2.05
CD44-212ENST00000524922 SLC5A4Q9NY91 659 aa2.27□□□□□ -2.05
CD44-212ENST00000524922 MARF1Q9Y4F3 1742 aaKnown RBP2.27□□□□□ -2.05
CD44-212ENST00000524922 KIF1AQ12756 1690 aa2.27□□□□□ -2.05
CD44-212ENST00000524922 DLC1Q96QB1 1528 aa2.27□□□□□ -2.05
CD44-212ENST00000524922 NRXN1Q9ULB1 1477 aa2.26□□□□□ -2.05
CD44-212ENST00000524922 TNS3Q68CZ2 1445 aa2.26□□□□□ -2.05
CD44-212ENST00000524922 ANKARQ7Z5J8 1434 aa2.26□□□□□ -2.05
CD44-212ENST00000524922 ADCY9O60503 1353 aa2.26□□□□□ -2.05
CD44-212ENST00000524922 ROCK1Q13464 1354 aa2.26□□□□□ -2.05
CD44-212ENST00000524922 EIF3AQ14152 1382 aaKnown RBP2.26□□□□□ -2.05
CD44-212ENST00000524922 ANKRD30AQ9BXX3 1397 aa2.26□□□□□ -2.05
CD44-212ENST00000524922 RPGRIP1LQ68CZ1 1315 aa2.26□□□□□ -2.05
CD44-212ENST00000524922 POLRMTO00411 1230 aaKnown RBP2.26□□□□□ -2.05
CD44-212ENST00000524922 TOP3BO95985 862 aaKnown RBP2.26□□□□□ -2.05
CD44-212ENST00000524922 MT-CO1P00395 513 aa2.26□□□□□ -2.05
CD44-212ENST00000524922 HNRNPCP07910 306 aaKnown RBP eCLIP2.26□□□□□ -2.05
CD44-212ENST00000524922 GJB1P08034 283 aa2.26□□□□□ -2.05
CD44-212ENST00000524922 PDHA1P08559 390 aa2.26□□□□□ -2.05
CD44-212ENST00000524922 NR2F6P10588 404 aa2.26□□□□□ -2.05
CD44-212ENST00000524922 CPEP16870 476 aa2.26□□□□□ -2.05
CD44-212ENST00000524922 ZFXP17010 805 aaPredicted RBP2.26□□□□□ -2.05
CD44-212ENST00000524922 HSPA6P17066 643 aa2.26□□□□□ -2.05
CD44-212ENST00000524922 CDKN1CP49918 316 aaPredicted RBP2.26□□□□□ -2.05
CD44-212ENST00000524922 CCT8P50990 548 aa2.26□□□□□ -2.05
CD44-212ENST00000524922 SP2Q02086 613 aa2.26□□□□□ -2.05
CD44-212ENST00000524922 KIF22Q14807 665 aa2.26□□□□□ -2.05
CD44-212ENST00000524922 EZH2Q15910 746 aaKnown RBP2.26□□□□□ -2.05
CD44-212ENST00000524922 ABCB5Q2M3G0 1257 aa2.26□□□□□ -2.05
CD44-212ENST00000524922 SUPT20HL1Q3ZLR7 823 aa2.26□□□□□ -2.05
CD44-212ENST00000524922 KHDC1Q4VXA5 237 aaKnown RBP2.26□□□□□ -2.05
CD44-212ENST00000524922 RBM20Q5T481 1227 aaKnown RBP2.26□□□□□ -2.05
CD44-212ENST00000524922 SYDE2Q5VT97 1194 aa2.26□□□□□ -2.05
CD44-212ENST00000524922 PGM2L1Q6PCE3 622 aa2.26□□□□□ -2.05
CD44-212ENST00000524922 MAVSQ7Z434 540 aa2.26□□□□□ -2.05
CD44-212ENST00000524922 PRR18Q8N4B5 295 aa2.26□□□□□ -2.05
CD44-212ENST00000524922 CAMKK1Q8N5S9 505 aa2.26□□□□□ -2.05
CD44-212ENST00000524922 B3GALNT2Q8NCR0 500 aa2.26□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms