RNA–Protein interactions for RNA: ENST00000524277.1

SPARC-206, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 2

Gene SPARC, Length 505 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-206ENST00000524277 PARD6AQ9NPB6 346 aa12.67□□□□□ -0.38
SPARC-206ENST00000524277 SEMA4GQ9NTN9 838 aa12.67□□□□□ -0.38
SPARC-206ENST00000524277 DUS2Q9NX74 493 aaKnown RBP12.67□□□□□ -0.38
SPARC-206ENST00000524277 PVALEFA0A1B0GWK0 134 aa12.66□□□□□ -0.38
SPARC-206ENST00000524277 SLC30A4O14863 429 aa12.66□□□□□ -0.38
SPARC-206ENST00000524277 HDCP19113 662 aa12.66□□□□□ -0.38
SPARC-206ENST00000524277 TNNI1P19237 187 aa12.66□□□□□ -0.38
SPARC-206ENST00000524277 GJA4P35212 333 aa12.66□□□□□ -0.38
SPARC-206ENST00000524277 GNL1P36915 607 aaPredicted RBP12.66□□□□□ -0.38
SPARC-206ENST00000524277 GRIK1P39086 918 aa12.66□□□□□ -0.38
SPARC-206ENST00000524277 IFNAR2P48551 515 aa12.66□□□□□ -0.38
SPARC-206ENST00000524277 GALK1P51570 392 aa12.66□□□□□ -0.38
SPARC-206ENST00000524277 CDR1P51861 262 aa12.66□□□□□ -0.38
SPARC-206ENST00000524277 KCNB1Q14721 858 aa12.66□□□□□ -0.38
SPARC-206ENST00000524277 ZNF77Q15935 545 aa12.66□□□□□ -0.38
SPARC-206ENST00000524277 SNRNP35Q16560 246 aaKnown RBP12.66□□□□□ -0.38
SPARC-206ENST00000524277 LPAL2Q16609 132 aa12.66□□□□□ -0.38
SPARC-206ENST00000524277 FAM26FQ5R3K3 315 aa12.66□□□□□ -0.38
SPARC-206ENST00000524277 SDHAF4Q5VUM1 108 aa12.66□□□□□ -0.38
SPARC-206ENST00000524277 HEATR6Q6AI08 1181 aaKnown RBP12.66□□□□□ -0.38
SPARC-206ENST00000524277 ATL3Q6DD88 541 aa12.66□□□□□ -0.38
SPARC-206ENST00000524277 FSTL4Q6MZW2 842 aa12.66□□□□□ -0.38
SPARC-206ENST00000524277 PRR23CQ6ZRP0 262 aa12.66□□□□□ -0.38
SPARC-206ENST00000524277 DENND5BQ6ZUT9 1274 aa12.66□□□□□ -0.38
SPARC-206ENST00000524277 UNC13DQ70J99 1090 aa12.66□□□□□ -0.38
SPARC-206ENST00000524277 EPM2AIP1Q7L775 607 aaPredicted RBP12.66□□□□□ -0.38
SPARC-206ENST00000524277 TRAPPC11Q7Z392 1133 aa12.66□□□□□ -0.38
SPARC-206ENST00000524277 CBWD2Q8IUF1 395 aa12.66□□□□□ -0.38
SPARC-206ENST00000524277 XXYLT1Q8NBI6 393 aa12.66□□□□□ -0.38
SPARC-206ENST00000524277 OR5B17Q8NGF7 314 aa12.66□□□□□ -0.38
SPARC-206ENST00000524277 MYCBPAPQ8TBZ2 947 aa12.66□□□□□ -0.38
SPARC-206ENST00000524277 KBTBD7Q8WVZ9 684 aa12.66□□□□□ -0.38
SPARC-206ENST00000524277 GAB3Q8WWW8 586 aa12.66□□□□□ -0.38
SPARC-206ENST00000524277 CD101Q93033 1021 aa12.66□□□□□ -0.38
SPARC-206ENST00000524277 ACDQ96AP0 544 aa12.66□□□□□ -0.38
SPARC-206ENST00000524277 MMS19Q96T76 1030 aa12.66□□□□□ -0.38
SPARC-206ENST00000524277 TRPC7Q9HCX4 862 aa12.66□□□□□ -0.38
SPARC-206ENST00000524277 TRPM5Q9NZQ8 1165 aa12.66□□□□□ -0.38
SPARC-206ENST00000524277 GCNT4Q9P109 453 aa12.66□□□□□ -0.38
SPARC-206ENST00000524277 ARHGAP26Q9UNA1 814 aa12.66□□□□□ -0.38
SPARC-206ENST00000524277 PCDHGA5Q9Y5G8 931 aa12.66□□□□□ -0.38
SPARC-206ENST00000524277 DENND4CQ5VZ89 1909 aa12.65□□□□□ -0.38
SPARC-206ENST00000524277 TADA3O75528 432 aa12.65□□□□□ -0.38
SPARC-206ENST00000524277 RPP40O75818 363 aaKnown RBP12.65□□□□□ -0.38
SPARC-206ENST00000524277 NFATC1O95644 943 aa12.65□□□□□ -0.38
SPARC-206ENST00000524277 STAU1O95793 577 aaKnown RBP12.65□□□□□ -0.38
SPARC-206ENST00000524277 ATICP31939 592 aa12.65□□□□□ -0.38
SPARC-206ENST00000524277 AP3M2P53677 418 aa12.65□□□□□ -0.38
SPARC-206ENST00000524277 NOP14P78316 857 aaKnown RBP12.65□□□□□ -0.38
SPARC-206ENST00000524277 DMWDQ09019 674 aa12.65□□□□□ -0.38
SPARC-206ENST00000524277 USP4Q13107 963 aa12.65□□□□□ -0.38
SPARC-206ENST00000524277 PSMD6Q15008 389 aa12.65□□□□□ -0.38
SPARC-206ENST00000524277 EML3Q32P44 896 aa12.65□□□□□ -0.38
SPARC-206ENST00000524277 LMBRD2Q68DH5 695 aaPredicted RBP12.65□□□□□ -0.38
SPARC-206ENST00000524277 TRIM68Q6AZZ1 485 aa12.65□□□□□ -0.38
SPARC-206ENST00000524277 C12orf56Q8IXR9 622 aa12.65□□□□□ -0.38
SPARC-206ENST00000524277 FAM160A2Q8N612 972 aaPredicted RBP12.65□□□□□ -0.38
SPARC-206ENST00000524277 GOLGA5Q8TBA6 731 aa12.65□□□□□ -0.38
SPARC-206ENST00000524277 SNX21Q969T3 373 aa12.65□□□□□ -0.38
SPARC-206ENST00000524277 DHX58Q96C10 678 aa12.65□□□□□ -0.38
SPARC-206ENST00000524277 C8orf48Q96LL4 319 aa12.65□□□□□ -0.38
SPARC-206ENST00000524277 CGRRF1Q99675 332 aa12.65□□□□□ -0.38
SPARC-206ENST00000524277 TTLL2Q9BWV7 592 aa12.65□□□□□ -0.38
SPARC-206ENST00000524277 BACH2Q9BYV9 841 aa12.65□□□□□ -0.38
SPARC-206ENST00000524277 SNX25Q9H3E2 840 aa12.65□□□□□ -0.38
SPARC-206ENST00000524277 AGPAT3Q9NRZ7 376 aa12.65□□□□□ -0.38
SPARC-206ENST00000524277 FAM13BQ9NYF5 915 aa12.65□□□□□ -0.38
SPARC-206ENST00000524277 OTOL1A6NHN0 477 aaPredicted RBP12.64□□□□□ -0.39
SPARC-206ENST00000524277 SLC9A3R1O14745 358 aaPredicted RBP12.64□□□□□ -0.39
SPARC-206ENST00000524277 TGFB1I1O43294 461 aa12.64□□□□□ -0.39
SPARC-206ENST00000524277 RNF40O75150 1001 aa12.64□□□□□ -0.39
SPARC-206ENST00000524277 PDGFRBP09619 1106 aa12.64□□□□□ -0.39
SPARC-206ENST00000524277 ZNF806P0C7X5 589 aa12.64□□□□□ -0.39
SPARC-206ENST00000524277 DLATP10515 647 aaKnown RBP12.64□□□□□ -0.39
SPARC-206ENST00000524277 ARSAP15289 507 aa12.64□□□□□ -0.39
SPARC-206ENST00000524277 BDNFP23560 247 aa12.64□□□□□ -0.39
SPARC-206ENST00000524277 LMO2P25791 158 aa12.64□□□□□ -0.39
SPARC-206ENST00000524277 HOXD13P35453 343 aa12.64□□□□□ -0.39
SPARC-206ENST00000524277 RAP1GAPP47736 663 aa12.64□□□□□ -0.39
SPARC-206ENST00000524277 LIMK1P53667 647 aa12.64□□□□□ -0.39
SPARC-206ENST00000524277 TNNC1P63316 161 aa12.64□□□□□ -0.39
SPARC-206ENST00000524277 CYP27A1Q02318 531 aa12.64□□□□□ -0.39
SPARC-206ENST00000524277 CYP24A1Q07973 514 aa12.64□□□□□ -0.39
SPARC-206ENST00000524277 TRPC3Q13507 836 aa12.64□□□□□ -0.39
SPARC-206ENST00000524277 SYT13Q7L8C5 426 aa12.64□□□□□ -0.39
SPARC-206ENST00000524277 C11orf74Q86VG3 221 aa12.64□□□□□ -0.39
SPARC-206ENST00000524277 ARL14EPQ8N8R7 260 aaPredicted RBP12.64□□□□□ -0.39
SPARC-206ENST00000524277 SH3RF2Q8TEC5 729 aa12.64□□□□□ -0.39
SPARC-206ENST00000524277 MYLPFQ96A32 169 aa12.64□□□□□ -0.39
SPARC-206ENST00000524277 SYAP1Q96A49 352 aaPredicted RBP12.64□□□□□ -0.39
SPARC-206ENST00000524277 ZC3H10Q96K80 434 aaKnown RBP12.64□□□□□ -0.39
SPARC-206ENST00000524277 CYP2S1Q96SQ9 504 aa12.64□□□□□ -0.39
SPARC-206ENST00000524277 ELOVL4Q9GZR5 314 aa12.64□□□□□ -0.39
SPARC-206ENST00000524277 CRTAC1Q9NQ79 661 aa12.64□□□□□ -0.39
SPARC-206ENST00000524277 TFIP11Q9UBB9 837 aaKnown RBP12.64□□□□□ -0.39
SPARC-206ENST00000524277 EBF1Q9UH73 591 aa12.64□□□□□ -0.39
SPARC-206ENST00000524277 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.64□□□□□ -0.39
SPARC-206ENST00000524277 SPTBN2O15020 2390 aa12.64□□□□□ -0.39
SPARC-206ENST00000524277 KIF26AQ9ULI4 1882 aaPredicted RBP12.63□□□□□ -0.39
SPARC-206ENST00000524277 ZNF638Q14966 1978 aaKnown RBP12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 81.1 ms