RNA–Protein interactions for RNA: ENST00000524006.5

SPIDR-222, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 5

Gene SPIDR, Length 970 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-222ENST00000524006 SNX17Q15036 470 aa11.33□□□□□ -0.6
SPIDR-222ENST00000524006 CNGA2Q16280 664 aa11.33□□□□□ -0.6
SPIDR-222ENST00000524006 CCNG2Q16589 344 aa11.33□□□□□ -0.6
SPIDR-222ENST00000524006 CCL14Q16627 93 aa11.33□□□□□ -0.6
SPIDR-222ENST00000524006 TTMPQ5BVD1 217 aa11.33□□□□□ -0.6
SPIDR-222ENST00000524006 DAB2IPQ5VWQ8 1189 aa11.33□□□□□ -0.6
SPIDR-222ENST00000524006 SESTD1Q86VW0 696 aa11.33□□□□□ -0.6
SPIDR-222ENST00000524006 RFX6Q8HWS3 928 aa11.33□□□□□ -0.6
SPIDR-222ENST00000524006 IQCKQ8N0W5 287 aa11.33□□□□□ -0.6
SPIDR-222ENST00000524006 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.33□□□□□ -0.6
SPIDR-222ENST00000524006 FNIP1Q8TF40 1166 aa11.33□□□□□ -0.6
SPIDR-222ENST00000524006 FRMD8P1Q9BZ68 369 aaPredicted RBP11.33□□□□□ -0.6
SPIDR-222ENST00000524006 NXF3Q9H4D5 531 aaKnown RBP11.33□□□□□ -0.6
SPIDR-222ENST00000524006 TMBIM4Q9HC24 238 aa11.33□□□□□ -0.6
SPIDR-222ENST00000524006 HMGXB4Q9UGU5 601 aa11.33□□□□□ -0.6
SPIDR-222ENST00000524006 ZNF148Q9UQR1 794 aa11.33□□□□□ -0.6
SPIDR-222ENST00000524006 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.33□□□□□ -0.6
SPIDR-222ENST00000524006 O00370 1275 aa11.32□□□□□ -0.6
SPIDR-222ENST00000524006 ADCY6O43306 1168 aa11.32□□□□□ -0.6
SPIDR-222ENST00000524006 HUS1O60921 280 aa11.32□□□□□ -0.6
SPIDR-222ENST00000524006 GPR32O75388 356 aa11.32□□□□□ -0.6
SPIDR-222ENST00000524006 ERBB2P04626 1255 aa11.32□□□□□ -0.6
SPIDR-222ENST00000524006 CCL5P13501 91 aa11.32□□□□□ -0.6
SPIDR-222ENST00000524006 GRK4P32298 578 aa11.32□□□□□ -0.6
SPIDR-222ENST00000524006 TAF6P49848 677 aa11.32□□□□□ -0.6
SPIDR-222ENST00000524006 MRPS6P82932 125 aaKnown RBP11.32□□□□□ -0.6
SPIDR-222ENST00000524006 PLCB3Q01970 1234 aa11.32□□□□□ -0.6
SPIDR-222ENST00000524006 PRKCZQ05513 592 aa11.32□□□□□ -0.6
SPIDR-222ENST00000524006 ZNF844Q08AG5 666 aa11.32□□□□□ -0.6
SPIDR-222ENST00000524006 BYSLQ13895 437 aaKnown RBP11.32□□□□□ -0.6
SPIDR-222ENST00000524006 KRT81Q14533 505 aa11.32□□□□□ -0.6
SPIDR-222ENST00000524006 SIX1Q15475 284 aaPredicted RBP11.32□□□□□ -0.6
SPIDR-222ENST00000524006 GLRA4Q5JXX5 417 aa11.32□□□□□ -0.6
SPIDR-222ENST00000524006 FBXO47Q5MNV8 452 aa11.32□□□□□ -0.6
SPIDR-222ENST00000524006 IZUMO3Q5VZ72 239 aa11.32□□□□□ -0.6
SPIDR-222ENST00000524006 LCLAT1Q6UWP7 414 aa11.32□□□□□ -0.6
SPIDR-222ENST00000524006 KDM7AQ6ZMT4 941 aa11.32□□□□□ -0.6
SPIDR-222ENST00000524006 TRMT10CQ7L0Y3 403 aaKnown RBP11.32□□□□□ -0.6
SPIDR-222ENST00000524006 UNC93AQ86WB7 457 aa11.32□□□□□ -0.6
SPIDR-222ENST00000524006 XYLT1Q86Y38 959 aa11.32□□□□□ -0.6
SPIDR-222ENST00000524006 KCTD6Q8NC69 237 aa11.32□□□□□ -0.6
SPIDR-222ENST00000524006 FBXO25Q8TCJ0 367 aa11.32□□□□□ -0.6
SPIDR-222ENST00000524006 RAET1EQ8TD07 263 aa11.32□□□□□ -0.6
SPIDR-222ENST00000524006 ARL8AQ96BM9 186 aa11.32□□□□□ -0.6
SPIDR-222ENST00000524006 CPXM1Q96SM3 734 aa11.32□□□□□ -0.6
SPIDR-222ENST00000524006 TRAIPQ9BWF2 469 aa11.32□□□□□ -0.6
SPIDR-222ENST00000524006 MAK16Q9BXY0 300 aaKnown RBP11.32□□□□□ -0.6
SPIDR-222ENST00000524006 EIF2AQ9BY44 585 aaKnown RBP11.32□□□□□ -0.6
SPIDR-222ENST00000524006 FOXP3Q9BZS1 431 aa11.32□□□□□ -0.6
SPIDR-222ENST00000524006 PABPC3Q9H361 631 aaKnown RBP11.32□□□□□ -0.6
SPIDR-222ENST00000524006 CHST7Q9NS84 486 aa11.32□□□□□ -0.6
SPIDR-222ENST00000524006 ZDHHC18Q9NUE0 388 aa11.32□□□□□ -0.6
SPIDR-222ENST00000524006 GRHL1Q9NZI5 618 aa11.32□□□□□ -0.6
SPIDR-222ENST00000524006 FLRT1Q9NZU1 646 aa11.32□□□□□ -0.6
SPIDR-222ENST00000524006 CNTN3Q9P232 1028 aa11.32□□□□□ -0.6
SPIDR-222ENST00000524006 TUBGCP4Q9UGJ1 667 aa11.32□□□□□ -0.6
SPIDR-222ENST00000524006 TSPAN16Q9UKR8 245 aa11.32□□□□□ -0.6
SPIDR-222ENST00000524006 TRPV2Q9Y5S1 764 aa11.32□□□□□ -0.6
SPIDR-222ENST00000524006 TSC2P49815 1807 aa11.32□□□□□ -0.6
SPIDR-222ENST00000524006 ZNF638Q14966 1978 aaKnown RBP11.31□□□□□ -0.6
SPIDR-222ENST00000524006 SMIM23A6NLE4 172 aa11.31□□□□□ -0.6
SPIDR-222ENST00000524006 A8MXQ7 604 aa11.31□□□□□ -0.6
SPIDR-222ENST00000524006 F8VP50 259 aa11.31□□□□□ -0.6
SPIDR-222ENST00000524006 SGK1O00141 431 aa11.31□□□□□ -0.6
SPIDR-222ENST00000524006 HAS3O00219 553 aa11.31□□□□□ -0.6
SPIDR-222ENST00000524006 RGS16O15492 202 aaPredicted RBP11.31□□□□□ -0.6
SPIDR-222ENST00000524006 TREHO43280 583 aa11.31□□□□□ -0.6
SPIDR-222ENST00000524006 PRPSAP2O60256 369 aa11.31□□□□□ -0.6
SPIDR-222ENST00000524006 DUSP11O75319 330 aaKnown RBP11.31□□□□□ -0.6
SPIDR-222ENST00000524006 RARBP10826 455 aa11.31□□□□□ -0.6
SPIDR-222ENST00000524006 HOXD10P28358 340 aa11.31□□□□□ -0.6
SPIDR-222ENST00000524006 SDC4P31431 198 aa11.31□□□□□ -0.6
SPIDR-222ENST00000524006 GJA8P48165 433 aa11.31□□□□□ -0.6
SPIDR-222ENST00000524006 ATP1A2P50993 1020 aa11.31□□□□□ -0.6
SPIDR-222ENST00000524006 BCAT1P54687 386 aa11.31□□□□□ -0.6
SPIDR-222ENST00000524006 TRIP13Q15645 432 aaPredicted RBP11.31□□□□□ -0.6
SPIDR-222ENST00000524006 ZSCAN26Q16670 478 aa11.31□□□□□ -0.6
SPIDR-222ENST00000524006 PPP1R15BQ5SWA1 713 aa11.31□□□□□ -0.6
SPIDR-222ENST00000524006 C9orf57Q5W0N0 161 aa11.31□□□□□ -0.6
SPIDR-222ENST00000524006 ZDHHC24Q6UX98 284 aa11.31□□□□□ -0.6
SPIDR-222ENST00000524006 CHRDL2Q6WN34 429 aa11.31□□□□□ -0.6
SPIDR-222ENST00000524006 ACOT1Q86TX2 421 aa11.31□□□□□ -0.6
SPIDR-222ENST00000524006 APPL2Q8NEU8 664 aa11.31□□□□□ -0.6
SPIDR-222ENST00000524006 OR2W6PQ8NHA6 318 aa11.31□□□□□ -0.6
SPIDR-222ENST00000524006 UBA3Q8TBC4 463 aa11.31□□□□□ -0.6
SPIDR-222ENST00000524006 HSPH1Q92598 858 aa11.31□□□□□ -0.6
SPIDR-222ENST00000524006 KAT2BQ92831 832 aa11.31□□□□□ -0.6
SPIDR-222ENST00000524006 ART4Q93070 314 aa11.31□□□□□ -0.6
SPIDR-222ENST00000524006 TNIP3Q96KP6 325 aa11.31□□□□□ -0.6
SPIDR-222ENST00000524006 TWNKQ96RR1 684 aa11.31□□□□□ -0.6
SPIDR-222ENST00000524006 CCDC77Q9BR77 488 aa11.31□□□□□ -0.6
SPIDR-222ENST00000524006 CNPY3Q9BT09 278 aa11.31□□□□□ -0.6
SPIDR-222ENST00000524006 FAM49BQ9NUQ9 324 aa11.31□□□□□ -0.6
SPIDR-222ENST00000524006 SLC38A7Q9NVC3 462 aa11.31□□□□□ -0.6
SPIDR-222ENST00000524006 GABRQQ9UN88 632 aa11.31□□□□□ -0.6
SPIDR-222ENST00000524006 hCG_1818297A0A087WSY0 165 aa11.3□□□□□ -0.6
SPIDR-222ENST00000524006 MCF2LO15068 1137 aa11.3□□□□□ -0.6
SPIDR-222ENST00000524006 LIASO43766 372 aa11.3□□□□□ -0.6
SPIDR-222ENST00000524006 NUDT17P0C025 328 aa11.3□□□□□ -0.6
SPIDR-222ENST00000524006 RARGP13631 454 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms