RNA–Protein interactions for RNA: ENST00000523655.1

SREK1-213, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, human

TSL 5

Gene SREK1, Length 606 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SREK1-213	ENST00000523655	XRRA1	Q6P2D8	792 aa		5.63	□□□□□ -1.51
SREK1-213	ENST00000523655		Q6ZNX1	250 aa		5.63	□□□□□ -1.51
SREK1-213	ENST00000523655	RD3	Q7Z3Z2	195 aa		5.63	□□□□□ -1.51
SREK1-213	ENST00000523655	PRIMA1	Q86XR5	153 aa		5.63	□□□□□ -1.51
SREK1-213	ENST00000523655	PAF1	Q8N7H5	531 aa		5.63	□□□□□ -1.51
SREK1-213	ENST00000523655	SSH1	Q8WYL5	1049 aa		5.63	□□□□□ -1.51
SREK1-213	ENST00000523655	HPS3	Q969F9	1004 aa		5.63	□□□□□ -1.51
SREK1-213	ENST00000523655	C7orf25	Q9BPX7	421 aa		5.63	□□□□□ -1.51
SREK1-213	ENST00000523655	REXO4	Q9GZR2	422 aa	Known RBP	5.63	□□□□□ -1.51
SREK1-213	ENST00000523655	GALNT9	Q9HCQ5	603 aa		5.63	□□□□□ -1.51
SREK1-213	ENST00000523655	SWAP70	Q9UH65	585 aa		5.63	□□□□□ -1.51
SREK1-213	ENST00000523655	DMTF1	Q9Y222	760 aa		5.63	□□□□□ -1.51
SREK1-213	ENST00000523655	TNFRSF18	Q9Y5U5	241 aa		5.63	□□□□□ -1.51
SREK1-213	ENST00000523655	MAST3	O60307	1309 aa		5.63	□□□□□ -1.51
SREK1-213	ENST00000523655	MAP3K5	Q99683	1374 aa		5.63	□□□□□ -1.51
SREK1-213	ENST00000523655	PLEKHG1	Q9ULL1	1385 aa		5.63	□□□□□ -1.51
SREK1-213	ENST00000523655	ADGRL3	Q9HAR2	1447 aa		5.63	□□□□□ -1.51
SREK1-213	ENST00000523655	COL22A1	Q8NFW1	1626 aa	Predicted RBP	5.63	□□□□□ -1.51
SREK1-213	ENST00000523655	RREB1	Q92766	1687 aa		5.63	□□□□□ -1.51
SREK1-213	ENST00000523655	MARF1	Q9Y4F3	1742 aa	Known RBP	5.62	□□□□□ -1.51
SREK1-213	ENST00000523655	NDUFS2	O75306	463 aa		5.62	□□□□□ -1.51
SREK1-213	ENST00000523655	ERN1	O75460	977 aa	Known RBP	5.62	□□□□□ -1.51
SREK1-213	ENST00000523655	ZKSCAN1	P17029	563 aa	Predicted RBP	5.62	□□□□□ -1.51
SREK1-213	ENST00000523655	TM4SF4	P48230	202 aa		5.62	□□□□□ -1.51
SREK1-213	ENST00000523655	ADK	P55263	362 aa	Known RBP	5.62	□□□□□ -1.51
SREK1-213	ENST00000523655	SIM1	P81133	766 aa	Predicted RBP	5.62	□□□□□ -1.51
SREK1-213	ENST00000523655	MXRA7	P84157	204 aa		5.62	□□□□□ -1.51
SREK1-213	ENST00000523655	LMOD3	Q0VAK6	560 aa		5.62	□□□□□ -1.51
SREK1-213	ENST00000523655	ALF	Q53S48	1182 aa		5.62	□□□□□ -1.51
SREK1-213	ENST00000523655	FITM2	Q8N6M3	262 aa		5.62	□□□□□ -1.51
SREK1-213	ENST00000523655		Q8NA96	180 aa		5.62	□□□□□ -1.51
SREK1-213	ENST00000523655	FAM98A	Q8NCA5	519 aa	Known RBP	5.62	□□□□□ -1.51
SREK1-213	ENST00000523655	ZBTB34	Q8NCN2	500 aa		5.62	□□□□□ -1.51
SREK1-213	ENST00000523655	NSUN7	Q8NE18	718 aa	Known RBP	5.62	□□□□□ -1.51
SREK1-213	ENST00000523655	VOPP1	Q96AW1	172 aa		5.62	□□□□□ -1.51
SREK1-213	ENST00000523655	PTCD3	Q96EY7	689 aa	Known RBP	5.62	□□□□□ -1.51
SREK1-213	ENST00000523655	ABHD8	Q96I13	439 aa		5.62	□□□□□ -1.51
SREK1-213	ENST00000523655	BOD1	Q96IK1	185 aa		5.62	□□□□□ -1.51
SREK1-213	ENST00000523655	TMX3	Q96JJ7	454 aa		5.62	□□□□□ -1.51
SREK1-213	ENST00000523655	ACO2	Q99798	780 aa	Known RBP	5.62	□□□□□ -1.51
SREK1-213	ENST00000523655	FAM204A	Q9H8W3	233 aa		5.62	□□□□□ -1.51
SREK1-213	ENST00000523655	MAP3K20	Q9NYL2	800 aa	Known RBP	5.62	□□□□□ -1.51
SREK1-213	ENST00000523655	SLC45A2	Q9UMX9	530 aa		5.62	□□□□□ -1.51
SREK1-213	ENST00000523655	LIMCH1	Q9UPQ0	1083 aa		5.62	□□□□□ -1.51
SREK1-213	ENST00000523655	LAS1L	Q9Y4W2	734 aa	Known RBP	5.62	□□□□□ -1.51
SREK1-213	ENST00000523655	IPP	Q9Y573	584 aa		5.62	□□□□□ -1.51
SREK1-213	ENST00000523655	C1orf167	Q5SNV9	1468 aa		5.62	□□□□□ -1.51
SREK1-213	ENST00000523655	PLEKHH2	Q8IVE3	1493 aa		5.62	□□□□□ -1.51
SREK1-213	ENST00000523655	FAM171A2	A8MVW0	826 aa		5.61	□□□□□ -1.51
SREK1-213	ENST00000523655	NBN	O60934	754 aa		5.61	□□□□□ -1.51
SREK1-213	ENST00000523655	POU2F2	P09086	479 aa		5.61	□□□□□ -1.51
SREK1-213	ENST00000523655	PPM1F	P49593	454 aa	Predicted RBP	5.61	□□□□□ -1.51
SREK1-213	ENST00000523655	GOLGB1	Q14789	3259 aa	Known RBP	5.61	□□□□□ -1.51
SREK1-213	ENST00000523655	LONRF1	Q17RB8	773 aa		5.61	□□□□□ -1.51
SREK1-213	ENST00000523655	CCDC142	Q17RM4	750 aa		5.61	□□□□□ -1.51
SREK1-213	ENST00000523655	C3orf36	Q3SXR2	165 aa		5.61	□□□□□ -1.51
SREK1-213	ENST00000523655	FLYWCH1	Q4VC44	716 aa		5.61	□□□□□ -1.51
SREK1-213	ENST00000523655	CDC42BPA	Q5VT25	1732 aa		5.61	□□□□□ -1.51
SREK1-213	ENST00000523655	FOXR2	Q6PJQ5	311 aa		5.61	□□□□□ -1.51
SREK1-213	ENST00000523655	OVCH2	Q7RTZ1	564 aa		5.61	□□□□□ -1.51
SREK1-213	ENST00000523655	CASZ1	Q86V15	1759 aa		5.61	□□□□□ -1.51
SREK1-213	ENST00000523655	TEX19	Q8NA77	164 aa		5.61	□□□□□ -1.51
SREK1-213	ENST00000523655	DIS3L	Q8TF46	1054 aa	Known RBP	5.61	□□□□□ -1.51
SREK1-213	ENST00000523655	KAT5	Q92993	513 aa		5.61	□□□□□ -1.51
SREK1-213	ENST00000523655	WDR90	Q96KV7	1748 aa		5.61	□□□□□ -1.51
SREK1-213	ENST00000523655	AIFM2	Q9BRQ8	373 aa		5.61	□□□□□ -1.51
SREK1-213	ENST00000523655	GTPBP4	Q9BZE4	634 aa	Known RBP	5.61	□□□□□ -1.51
SREK1-213	ENST00000523655	ZNF644	Q9H582	1327 aa	Predicted RBP	5.61	□□□□□ -1.51
SREK1-213	ENST00000523655	IL17RB	Q9NRM6	502 aa		5.61	□□□□□ -1.51
SREK1-213	ENST00000523655	TMEM74B	Q9NUR3	256 aa		5.61	□□□□□ -1.51
SREK1-213	ENST00000523655	FAM30A	Q9NZY2	134 aa		5.61	□□□□□ -1.51
SREK1-213	ENST00000523655	KCNE5	Q9UJ90	142 aa		5.61	□□□□□ -1.51
SREK1-213	ENST00000523655	GTF2A1L	Q9UNN4	478 aa		5.61	□□□□□ -1.51
SREK1-213	ENST00000523655	KAT6A	Q92794	2004 aa		5.6	□□□□□ -1.51
SREK1-213	ENST00000523655	RPRD2	Q5VT52	1461 aa	Known RBP	5.6	□□□□□ -1.51
SREK1-213	ENST00000523655	PIK3R4	Q99570	1358 aa		5.6	□□□□□ -1.51
SREK1-213	ENST00000523655	GRM6	O15303	877 aa		5.6	□□□□□ -1.51
SREK1-213	ENST00000523655	AGFG2	O95081	481 aa		5.6	□□□□□ -1.51
SREK1-213	ENST00000523655	EDNRB	P24530	442 aa		5.6	□□□□□ -1.51
SREK1-213	ENST00000523655	VAV2	P52735	878 aa		5.6	□□□□□ -1.51
SREK1-213	ENST00000523655	MRPS21	P82921	87 aa	Known RBP	5.6	□□□□□ -1.51
SREK1-213	ENST00000523655	ZNF169	Q14929	603 aa	Predicted RBP	5.6	□□□□□ -1.51
SREK1-213	ENST00000523655	WDR78	Q5VTH9	848 aa		5.6	□□□□□ -1.51
SREK1-213	ENST00000523655	SP5	Q6BEB4	398 aa	Predicted RBP	5.6	□□□□□ -1.51
SREK1-213	ENST00000523655	CCDC70	Q6NSX1	233 aa		5.6	□□□□□ -1.51
SREK1-213	ENST00000523655	ZNF354C	Q86Y25	554 aa		5.6	□□□□□ -1.51
SREK1-213	ENST00000523655	MIER2	Q8N344	545 aa		5.6	□□□□□ -1.51
SREK1-213	ENST00000523655	NKAP	Q8N5F7	415 aa	Known RBP	5.6	□□□□□ -1.51
SREK1-213	ENST00000523655	BOLL	Q8N9W6	283 aa	Known RBP	5.6	□□□□□ -1.51
SREK1-213	ENST00000523655	FAM156A	Q8NDB6	213 aa		5.6	□□□□□ -1.51
SREK1-213	ENST00000523655	CYFIP2	Q96F07	1278 aa		5.6	□□□□□ -1.51
SREK1-213	ENST00000523655	SGCZ	Q96LD1	299 aa		5.6	□□□□□ -1.51
SREK1-213	ENST00000523655	SELENOO	Q9BVL4	669 aa		5.6	□□□□□ -1.51
SREK1-213	ENST00000523655	C11orf54	Q9H0W9	315 aa	Predicted RBP	5.6	□□□□□ -1.51
SREK1-213	ENST00000523655	TMEM60	Q9H2L4	133 aa		5.6	□□□□□ -1.51
SREK1-213	ENST00000523655	MANSC1	Q9H8J5	431 aa		5.6	□□□□□ -1.51
SREK1-213	ENST00000523655	TRMT13	Q9NUP7	481 aa	Known RBP	5.6	□□□□□ -1.51
SREK1-213	ENST00000523655	TBCCD1	Q9NVR7	557 aa		5.6	□□□□□ -1.51
SREK1-213	ENST00000523655	FOXJ2	Q9P0K8	574 aa		5.6	□□□□□ -1.51
SREK1-213	ENST00000523655	INSL6	Q9Y581	213 aa		5.6	□□□□□ -1.51

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