RNA–Protein interactions for RNA: ENST00000523469.5

CPNE3-206, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 656 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-206ENST00000523469 SLC44A3Q8N4M1 653 aa7.23□□□□□ -1.25
CPNE3-206ENST00000523469 BEND2Q8NDZ0 799 aa7.23□□□□□ -1.25
CPNE3-206ENST00000523469 MESP1Q9BRJ9 268 aa7.23□□□□□ -1.25
CPNE3-206ENST00000523469 PTDSS2Q9BVG9 487 aa7.23□□□□□ -1.25
CPNE3-206ENST00000523469 AMBRA1Q9C0C7 1298 aa7.23□□□□□ -1.25
CPNE3-206ENST00000523469 ZSCAN32Q9NX65 697 aa7.23□□□□□ -1.25
CPNE3-206ENST00000523469 COL20A1Q9P218 1284 aa7.23□□□□□ -1.25
CPNE3-206ENST00000523469 EPN1Q9Y6I3 576 aaPredicted RBP7.23□□□□□ -1.25
CPNE3-206ENST00000523469 POGZQ7Z3K3 1410 aa7.23□□□□□ -1.25
CPNE3-206ENST00000523469 TTC37Q6PGP7 1564 aa7.23□□□□□ -1.25
CPNE3-206ENST00000523469 LTBP4Q8N2S1 1624 aa7.23□□□□□ -1.25
CPNE3-206ENST00000523469 MBD3L4A6NDZ8 208 aaPredicted RBP7.22□□□□□ -1.25
CPNE3-206ENST00000523469 MBD3L3A6NE82 208 aaPredicted RBP7.22□□□□□ -1.25
CPNE3-206ENST00000523469 YY2O15391 372 aa7.22□□□□□ -1.25
CPNE3-206ENST00000523469 PEX1O43933 1283 aa7.22□□□□□ -1.25
CPNE3-206ENST00000523469 ESRRBO95718 433 aa7.22□□□□□ -1.25
CPNE3-206ENST00000523469 SLC5A1P13866 664 aa7.22□□□□□ -1.25
CPNE3-206ENST00000523469 LRPAP1P30533 357 aa7.22□□□□□ -1.25
CPNE3-206ENST00000523469 SEC24CP53992 1094 aa7.22□□□□□ -1.25
CPNE3-206ENST00000523469 NXPH1P58417 271 aa7.22□□□□□ -1.25
CPNE3-206ENST00000523469 MPP3Q13368 585 aa7.22□□□□□ -1.25
CPNE3-206ENST00000523469 HECTD2Q5U5R9 776 aa7.22□□□□□ -1.25
CPNE3-206ENST00000523469 DCAF12L1Q5VU92 463 aa7.22□□□□□ -1.25
CPNE3-206ENST00000523469 MRGPRGQ86SM5 289 aa7.22□□□□□ -1.25
CPNE3-206ENST00000523469 LDLRAD3Q86YD5 345 aa7.22□□□□□ -1.25
CPNE3-206ENST00000523469 FAM136AQ96C01 138 aa7.22□□□□□ -1.25
CPNE3-206ENST00000523469 PGBD1Q96JS3 809 aa7.22□□□□□ -1.25
CPNE3-206ENST00000523469 STRBPQ96SI9 672 aaKnown RBP7.22□□□□□ -1.25
CPNE3-206ENST00000523469 TPSD1Q9BZJ3 242 aa7.22□□□□□ -1.25
CPNE3-206ENST00000523469 TOR3AQ9H497 397 aa7.22□□□□□ -1.25
CPNE3-206ENST00000523469 SNX13Q9Y5W8 968 aa7.22□□□□□ -1.25
CPNE3-206ENST00000523469 FANCAO15360 1455 aa7.22□□□□□ -1.25
CPNE3-206ENST00000523469 FRMPD1Q5SYB0 1578 aa7.21□□□□□ -1.25
CPNE3-206ENST00000523469 RHPN2P1A8MT19 583 aa7.21□□□□□ -1.26
CPNE3-206ENST00000523469 TMEM233B4DJY2 109 aa7.21□□□□□ -1.26
CPNE3-206ENST00000523469 PYCARD-AS1I3L0S3 204 aa7.21□□□□□ -1.26
CPNE3-206ENST00000523469 PMM2O15305 246 aa7.21□□□□□ -1.26
CPNE3-206ENST00000523469 NBPF7P0C2Y1 421 aaPredicted RBP7.21□□□□□ -1.26
CPNE3-206ENST00000523469 KLRC1P26715 233 aa7.21□□□□□ -1.26
CPNE3-206ENST00000523469 PPIFP30405 207 aaKnown RBP7.21□□□□□ -1.26
CPNE3-206ENST00000523469 MPLP40238 635 aa7.21□□□□□ -1.26
CPNE3-206ENST00000523469 FOLR3P41439 243 aa7.21□□□□□ -1.26
CPNE3-206ENST00000523469 HNRNPMP52272 730 aaKnown RBP eCLIP7.21□□□□□ -1.26
CPNE3-206ENST00000523469 RPS16P62249 146 aaKnown RBP7.21□□□□□ -1.26
CPNE3-206ENST00000523469 DPTQ07507 201 aa7.21□□□□□ -1.26
CPNE3-206ENST00000523469 MGAT5BQ3V5L5 792 aa7.21□□□□□ -1.26
CPNE3-206ENST00000523469 PLA1AQ53H76 456 aa7.21□□□□□ -1.26
CPNE3-206ENST00000523469 VPS53Q5VIR6 699 aa7.21□□□□□ -1.26
CPNE3-206ENST00000523469 ICE2Q659A1 982 aa7.21□□□□□ -1.26
CPNE3-206ENST00000523469 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP7.21□□□□□ -1.26
CPNE3-206ENST00000523469 TOR1AIP2Q8NFQ8 470 aa7.21□□□□□ -1.26
CPNE3-206ENST00000523469 OR56A3Q8NH54 315 aa7.21□□□□□ -1.26
CPNE3-206ENST00000523469 MYCBPAPQ8TBZ2 947 aa7.21□□□□□ -1.26
CPNE3-206ENST00000523469 TTPALQ9BTX7 342 aa7.21□□□□□ -1.26
CPNE3-206ENST00000523469 UNKQ9C0B0 810 aaKnown RBP7.21□□□□□ -1.26
CPNE3-206ENST00000523469 TMPRSS5Q9H3S3 457 aa7.21□□□□□ -1.26
CPNE3-206ENST00000523469 RGS17Q9UGC6 210 aaPredicted RBP7.21□□□□□ -1.26
CPNE3-206ENST00000523469 ING1Q9UK53 422 aaPredicted RBP7.21□□□□□ -1.26
CPNE3-206ENST00000523469 PACSIN3Q9UKS6 424 aa7.21□□□□□ -1.26
CPNE3-206ENST00000523469 AKAP8O43823 692 aaKnown RBP7.2□□□□□ -1.26
CPNE3-206ENST00000523469 RAMP2O60895 175 aa7.2□□□□□ -1.26
CPNE3-206ENST00000523469 RHOBTB3O94955 611 aa7.2□□□□□ -1.26
CPNE3-206ENST00000523469 GCP02774 474 aa7.2□□□□□ -1.26
CPNE3-206ENST00000523469 INHBCP55103 352 aa7.2□□□□□ -1.26
CPNE3-206ENST00000523469 KRT17Q04695 432 aa7.2□□□□□ -1.26
CPNE3-206ENST00000523469 FOXI1Q12951 378 aa7.2□□□□□ -1.26
CPNE3-206ENST00000523469 KIAA0895LQ68EN5 471 aa7.2□□□□□ -1.26
CPNE3-206ENST00000523469 RAPGEF4Q8WZA2 1011 aa7.2□□□□□ -1.26
CPNE3-206ENST00000523469 SLC9A6Q92581 669 aa7.2□□□□□ -1.26
CPNE3-206ENST00000523469 SPSB4Q96A44 273 aa7.2□□□□□ -1.26
CPNE3-206ENST00000523469 ACTRT3Q9BYD9 372 aa7.2□□□□□ -1.26
CPNE3-206ENST00000523469 PTPRTO14522 1441 aa7.19□□□□□ -1.26
CPNE3-206ENST00000523469 UHRF1BP1Q6BDS2 1440 aa7.19□□□□□ -1.26
CPNE3-206ENST00000523469 SETD1BQ9UPS6 1966 aaKnown RBP7.19□□□□□ -1.26
CPNE3-206ENST00000523469 MPPED1O15442 326 aa7.19□□□□□ -1.26
CPNE3-206ENST00000523469 SLPIP03973 132 aa7.19□□□□□ -1.26
CPNE3-206ENST00000523469 PIK3CBP42338 1070 aa7.19□□□□□ -1.26
CPNE3-206ENST00000523469 E2F2Q14209 437 aa7.19□□□□□ -1.26
CPNE3-206ENST00000523469 PTPRRQ15256 657 aa7.19□□□□□ -1.26
CPNE3-206ENST00000523469 NBPF8Q3BBV2 869 aa7.19□□□□□ -1.26
CPNE3-206ENST00000523469 ARHGAP40Q5TG30 622 aa7.19□□□□□ -1.26
CPNE3-206ENST00000523469 TSHZ1Q6ZSZ6 1077 aa7.19□□□□□ -1.26
CPNE3-206ENST00000523469 FBXL20Q96IG2 436 aa7.19□□□□□ -1.26
CPNE3-206ENST00000523469 PPP1R9BQ96SB3 815 aa7.19□□□□□ -1.26
CPNE3-206ENST00000523469 PNPLA8Q9NP80 782 aa7.19□□□□□ -1.26
CPNE3-206ENST00000523469 XPNPEP3Q9NQH7 507 aa7.19□□□□□ -1.26
CPNE3-206ENST00000523469 NDRG4Q9ULP0 352 aaKnown RBP7.19□□□□□ -1.26
CPNE3-206ENST00000523469 CORO2BQ9UQ03 480 aa7.19□□□□□ -1.26
CPNE3-206ENST00000523469 RASSF9O75901 435 aa7.18□□□□□ -1.26
CPNE3-206ENST00000523469 IL18RAPO95256 599 aa7.18□□□□□ -1.26
CPNE3-206ENST00000523469 ADRA1BP35368 520 aa7.18□□□□□ -1.26
CPNE3-206ENST00000523469 DGKEP52429 567 aa7.18□□□□□ -1.26
CPNE3-206ENST00000523469 TGFB2P61812 414 aa7.18□□□□□ -1.26
CPNE3-206ENST00000523469 MRPS35P82673 323 aaKnown RBP7.18□□□□□ -1.26
CPNE3-206ENST00000523469 FSTL1Q12841 308 aa7.18□□□□□ -1.26
CPNE3-206ENST00000523469 MYO1EQ12965 1108 aa7.18□□□□□ -1.26
CPNE3-206ENST00000523469 IFIT5Q13325 482 aaKnown RBP7.18□□□□□ -1.26
CPNE3-206ENST00000523469 PICALMQ13492 652 aa7.18□□□□□ -1.26
CPNE3-206ENST00000523469 RGS7BPQ6MZT1 257 aaPredicted RBP7.18□□□□□ -1.26
CPNE3-206ENST00000523469 ZNF280BQ86YH2 543 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms