RNA–Protein interactions for RNA: ENST00000523441.1

SDCBP-211, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-211ENST00000523441 DSEQ9UL01 958 aa12.53□□□□□ -0.4
SDCBP-211ENST00000523441 PCDHB9Q9Y5E1 797 aa12.53□□□□□ -0.4
SDCBP-211ENST00000523441 LAMA5O15230 3695 aa12.53□□□□□ -0.4
SDCBP-211ENST00000523441 TISP43B9A030 160 aa12.52□□□□□ -0.41
SDCBP-211ENST00000523441 PIRO00625 290 aa12.52□□□□□ -0.41
SDCBP-211ENST00000523441 TNFRSF10BO14763 440 aa12.52□□□□□ -0.41
SDCBP-211ENST00000523441 HCRTO43612 131 aa12.52□□□□□ -0.41
SDCBP-211ENST00000523441 NFATC1O95644 943 aa12.52□□□□□ -0.41
SDCBP-211ENST00000523441 ABL1P00519 1130 aa12.52□□□□□ -0.41
SDCBP-211ENST00000523441 CYP11A1P05108 521 aa12.52□□□□□ -0.41
SDCBP-211ENST00000523441 P2RY2P41231 377 aa12.52□□□□□ -0.41
SDCBP-211ENST00000523441 WASP42768 502 aa12.52□□□□□ -0.41
SDCBP-211ENST00000523441 RPL6Q02878 288 aaKnown RBP12.52□□□□□ -0.41
SDCBP-211ENST00000523441 MESP2Q0VG99 397 aa12.52□□□□□ -0.41
SDCBP-211ENST00000523441 USP4Q13107 963 aa12.52□□□□□ -0.41
SDCBP-211ENST00000523441 SEMA3BQ13214 749 aa12.52□□□□□ -0.41
SDCBP-211ENST00000523441 IL17AQ16552 155 aa12.52□□□□□ -0.41
SDCBP-211ENST00000523441 PIP4P1Q86T03 277 aa12.52□□□□□ -0.41
SDCBP-211ENST00000523441 CCDC83Q8IWF9 413 aa12.52□□□□□ -0.41
SDCBP-211ENST00000523441 LRRC15Q8TF66 581 aa12.52□□□□□ -0.41
SDCBP-211ENST00000523441 NOC3LQ8WTT2 800 aaKnown RBP12.52□□□□□ -0.41
SDCBP-211ENST00000523441 C2orf15Q8WU43 125 aaKnown RBP12.52□□□□□ -0.41
SDCBP-211ENST00000523441 CDK5RAP3Q96JB5 506 aa12.52□□□□□ -0.41
SDCBP-211ENST00000523441 FAM84AQ96KN4 292 aa12.52□□□□□ -0.41
SDCBP-211ENST00000523441 BBC3Q96PG8 261 aaPredicted RBP12.52□□□□□ -0.41
SDCBP-211ENST00000523441 C17orf75Q9HAS0 396 aa12.52□□□□□ -0.41
SDCBP-211ENST00000523441 POLMQ9NP87 494 aaPredicted RBP12.52□□□□□ -0.41
SDCBP-211ENST00000523441 SMPD4Q9NXE4 827 aa12.52□□□□□ -0.41
SDCBP-211ENST00000523441 RAXQ9Y2V3 346 aa12.52□□□□□ -0.41
SDCBP-211ENST00000523441 PCDHB6Q9Y5E3 794 aa12.52□□□□□ -0.41
SDCBP-211ENST00000523441 PLXNB3Q9ULL4 1909 aa12.52□□□□□ -0.41
SDCBP-211ENST00000523441 FREM2Q5SZK8 3169 aa12.51□□□□□ -0.41
SDCBP-211ENST00000523441 SH3BP5O60239 455 aa12.51□□□□□ -0.41
SDCBP-211ENST00000523441 PLA2G4BP0C869 781 aa12.51□□□□□ -0.41
SDCBP-211ENST00000523441 HDCP19113 662 aa12.51□□□□□ -0.41
SDCBP-211ENST00000523441 GUCY2CP25092 1073 aa12.51□□□□□ -0.41
SDCBP-211ENST00000523441 PDIA5Q14554 519 aa12.51□□□□□ -0.41
SDCBP-211ENST00000523441 ZNF268Q14587 947 aaPredicted RBP12.51□□□□□ -0.41
SDCBP-211ENST00000523441 LMBRD2Q68DH5 695 aaPredicted RBP12.51□□□□□ -0.41
SDCBP-211ENST00000523441 SLC23A3Q6PIS1 610 aa12.51□□□□□ -0.41
SDCBP-211ENST00000523441 FILIP1Q7Z7B0 1213 aa12.51□□□□□ -0.41
SDCBP-211ENST00000523441 MARCH9Q86YJ5 346 aa12.51□□□□□ -0.41
SDCBP-211ENST00000523441 MYCT1Q8N699 235 aa12.51□□□□□ -0.41
SDCBP-211ENST00000523441 IGSF22Q8N9C0 903 aa12.51□□□□□ -0.41
SDCBP-211ENST00000523441 IL17RCQ8NAC3 791 aa12.51□□□□□ -0.41
SDCBP-211ENST00000523441 PNMA5Q96PV4 448 aa12.51□□□□□ -0.41
SDCBP-211ENST00000523441 NTPCRQ9BSD7 190 aaKnown RBP12.51□□□□□ -0.41
SDCBP-211ENST00000523441 MMTAG2Q9BU76 263 aaKnown RBP12.51□□□□□ -0.41
SDCBP-211ENST00000523441 CCDC86Q9H6F5 360 aaKnown RBP12.51□□□□□ -0.41
SDCBP-211ENST00000523441 DDX43Q9NXZ2 648 aaKnown RBP12.51□□□□□ -0.41
SDCBP-211ENST00000523441 UXTQ9UBK9 157 aaPredicted RBP12.51□□□□□ -0.41
SDCBP-211ENST00000523441 CPSF3Q9UKF6 684 aaKnown RBP12.51□□□□□ -0.41
SDCBP-211ENST00000523441 PILRBQ9UKJ0 227 aa12.51□□□□□ -0.41
SDCBP-211ENST00000523441 GTF3C4Q9UKN8 822 aa12.51□□□□□ -0.41
SDCBP-211ENST00000523441 SLC6A14Q9UN76 642 aa12.51□□□□□ -0.41
SDCBP-211ENST00000523441 BPTFQ12830 3046 aa12.51□□□□□ -0.41
SDCBP-211ENST00000523441 LOC400499M0QZD8 3231 aa12.5□□□□□ -0.41
SDCBP-211ENST00000523441 ANO9A1A5B4 782 aa12.5□□□□□ -0.41
SDCBP-211ENST00000523441 MYMKA6NI61 221 aa12.5□□□□□ -0.41
SDCBP-211ENST00000523441 GOLGA8CPA6NN73 597 aa12.5□□□□□ -0.41
SDCBP-211ENST00000523441 KPNA7A9QM74 516 aa12.5□□□□□ -0.41
SDCBP-211ENST00000523441 ANKRD63C9JTQ0 380 aa12.5□□□□□ -0.41
SDCBP-211ENST00000523441 H0Y626 953 aa12.5□□□□□ -0.41
SDCBP-211ENST00000523441 FAM189A1O60320 539 aa12.5□□□□□ -0.41
SDCBP-211ENST00000523441 TRIM16O95361 564 aa12.5□□□□□ -0.41
SDCBP-211ENST00000523441 APODP05090 189 aa12.5□□□□□ -0.41
SDCBP-211ENST00000523441 CYP17A1P05093 508 aa12.5□□□□□ -0.41
SDCBP-211ENST00000523441 NEK4P51957 841 aa12.5□□□□□ -0.41
SDCBP-211ENST00000523441 NCKAP1LP55160 1127 aa12.5□□□□□ -0.41
SDCBP-211ENST00000523441 RPL10AP62906 217 aaKnown RBP12.5□□□□□ -0.41
SDCBP-211ENST00000523441 ATP2C1P98194 919 aaPredicted RBP12.5□□□□□ -0.41
SDCBP-211ENST00000523441 ST3GAL1Q11201 340 aa12.5□□□□□ -0.41
SDCBP-211ENST00000523441 IFRD2Q12894 506 aaPredicted RBP12.5□□□□□ -0.41
SDCBP-211ENST00000523441 ORC2Q13416 577 aaPredicted RBP12.5□□□□□ -0.41
SDCBP-211ENST00000523441 TRIP6Q15654 476 aaKnown RBP12.5□□□□□ -0.41
SDCBP-211ENST00000523441 KYAT1Q16773 422 aa12.5□□□□□ -0.41
SDCBP-211ENST00000523441 DUOXA1Q1HG43 343 aa12.5□□□□□ -0.41
SDCBP-211ENST00000523441 SV2CQ496J9 727 aa12.5□□□□□ -0.41
SDCBP-211ENST00000523441 ADALQ6DHV7 355 aa12.5□□□□□ -0.41
SDCBP-211ENST00000523441 SLC39A4Q6P5W5 647 aa12.5□□□□□ -0.41
SDCBP-211ENST00000523441 DTHD1Q6ZMT9 781 aa12.5□□□□□ -0.41
SDCBP-211ENST00000523441 RAB44Q7Z6P3 723 aaPredicted RBP12.5□□□□□ -0.41
SDCBP-211ENST00000523441 C12orf40Q86WS4 652 aa12.5□□□□□ -0.41
SDCBP-211ENST00000523441 SPATA2LQ8IUW3 424 aaPredicted RBP12.5□□□□□ -0.41
SDCBP-211ENST00000523441 RGL4Q8IZJ4 473 aa12.5□□□□□ -0.41
SDCBP-211ENST00000523441 NAT16Q8N8M0 369 aa12.5□□□□□ -0.41
SDCBP-211ENST00000523441 FSIP1Q8NA03 581 aa12.5□□□□□ -0.41
SDCBP-211ENST00000523441 CCDC26Q8TAB7 109 aa12.5□□□□□ -0.41
SDCBP-211ENST00000523441 OLIG1Q8TAK6 271 aa12.5□□□□□ -0.41
SDCBP-211ENST00000523441 PNKPQ96T60 521 aa12.5□□□□□ -0.41
SDCBP-211ENST00000523441 TIPINQ9BVW5 301 aa12.5□□□□□ -0.41
SDCBP-211ENST00000523441 IKZF4Q9H2S9 585 aa12.5□□□□□ -0.41
SDCBP-211ENST00000523441 FOXP1Q9H334 677 aaPredicted RBP12.5□□□□□ -0.41
SDCBP-211ENST00000523441 LARSQ9P2J5 1176 aaKnown RBP12.5□□□□□ -0.41
SDCBP-211ENST00000523441 STK24Q9Y6E0 443 aa12.5□□□□□ -0.41
SDCBP-211ENST00000523441 PLXND1Q9Y4D7 1925 aa12.5□□□□□ -0.41
SDCBP-211ENST00000523441 PTPRBP23467 1997 aa12.5□□□□□ -0.41
SDCBP-211ENST00000523441 MYO18AQ92614 2054 aaKnown RBP12.49□□□□□ -0.41
SDCBP-211ENST00000523441 PCDH15Q96QU1 1955 aa12.49□□□□□ -0.41
SDCBP-211ENST00000523441 A0A0B4J269 797 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms