RNA–Protein interactions for RNA: ENST00000522843.5

SDCBP-210, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 764 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-210ENST00000522843 DDX1Q92499 740 aaKnown RBP7.46□□□□□ -1.22
SDCBP-210ENST00000522843 CUL5Q93034 780 aa7.46□□□□□ -1.22
SDCBP-210ENST00000522843 PGBD1Q96JS3 809 aa7.46□□□□□ -1.22
SDCBP-210ENST00000522843 SDF4Q9BRK5 362 aa7.46□□□□□ -1.22
SDCBP-210ENST00000522843 PLA2G2FQ9BZM2 168 aa7.46□□□□□ -1.22
SDCBP-210ENST00000522843 KRT23Q9C075 422 aa7.46□□□□□ -1.22
SDCBP-210ENST00000522843 IL25Q9H293 177 aa7.46□□□□□ -1.22
SDCBP-210ENST00000522843 PSTPIP2Q9H939 334 aa7.46□□□□□ -1.22
SDCBP-210ENST00000522843 ZNF302Q9NR11 478 aa7.46□□□□□ -1.22
SDCBP-210ENST00000522843 VTI1BQ9UEU0 232 aa7.46□□□□□ -1.22
SDCBP-210ENST00000522843 CDH7Q9ULB5 785 aa7.46□□□□□ -1.22
SDCBP-210ENST00000522843 KCNH3Q9ULD8 1083 aa7.46□□□□□ -1.22
SDCBP-210ENST00000522843 TAF6LQ9Y6J9 622 aa7.46□□□□□ -1.22
SDCBP-210ENST00000522843 GREB1Q4ZG55 1949 aa7.46□□□□□ -1.22
SDCBP-210ENST00000522843 COL4A2P08572 1712 aa7.46□□□□□ -1.22
SDCBP-210ENST00000522843 FREM2Q5SZK8 3169 aa7.45□□□□□ -1.22
SDCBP-210ENST00000522843 FAM221AA4D161 298 aa7.45□□□□□ -1.22
SDCBP-210ENST00000522843 UPK3BL1B0FP48 263 aa7.45□□□□□ -1.22
SDCBP-210ENST00000522843 UPK3BL2E5RIL1 263 aa7.45□□□□□ -1.22
SDCBP-210ENST00000522843 MEIS1O00470 390 aa7.45□□□□□ -1.22
SDCBP-210ENST00000522843 F13A1P00488 732 aa7.45□□□□□ -1.22
SDCBP-210ENST00000522843 SDSP20132 328 aa7.45□□□□□ -1.22
SDCBP-210ENST00000522843 CHRNEQ04844 493 aa7.45□□□□□ -1.22
SDCBP-210ENST00000522843 CCDC6Q16204 474 aa7.45□□□□□ -1.22
SDCBP-210ENST00000522843 EFCAB12Q6NXP0 572 aa7.45□□□□□ -1.22
SDCBP-210ENST00000522843 TRMT1LQ7Z2T5 733 aaKnown RBP7.45□□□□□ -1.22
SDCBP-210ENST00000522843 GRASPQ7Z6J2 395 aaPredicted RBP7.45□□□□□ -1.22
SDCBP-210ENST00000522843 PALB2Q86YC2 1186 aa7.45□□□□□ -1.22
SDCBP-210ENST00000522843 SRBD1Q8N5C6 995 aaKnown RBP7.45□□□□□ -1.22
SDCBP-210ENST00000522843 HDAC7Q8WUI4 952 aa7.45□□□□□ -1.22
SDCBP-210ENST00000522843 FGF13Q92913 245 aa7.45□□□□□ -1.22
SDCBP-210ENST00000522843 B3GALT6Q96L58 329 aa7.45□□□□□ -1.22
SDCBP-210ENST00000522843 KXD1Q9BQD3 176 aa7.45□□□□□ -1.22
SDCBP-210ENST00000522843 SPZ1Q9BXG8 430 aa7.45□□□□□ -1.22
SDCBP-210ENST00000522843 HEBP1Q9NRV9 189 aa7.45□□□□□ -1.22
SDCBP-210ENST00000522843 ZDHHC7Q9NXF8 308 aa7.45□□□□□ -1.22
SDCBP-210ENST00000522843 GPR160Q9UJ42 338 aa7.45□□□□□ -1.22
SDCBP-210ENST00000522843 RAB23Q9ULC3 237 aa7.45□□□□□ -1.22
SDCBP-210ENST00000522843 AKT3Q9Y243 479 aa7.45□□□□□ -1.22
SDCBP-210ENST00000522843 WDR81Q562E7 1941 aa7.44□□□□□ -1.22
SDCBP-210ENST00000522843 hCG_1642624A0A1W2PR95 340 aa7.44□□□□□ -1.22
SDCBP-210ENST00000522843 CHURC1-FNTBB4DL54 471 aa7.44□□□□□ -1.22
SDCBP-210ENST00000522843 ZNF623O75123 536 aa7.44□□□□□ -1.22
SDCBP-210ENST00000522843 CILPO75339 1184 aa7.44□□□□□ -1.22
SDCBP-210ENST00000522843 PLEKHA8P1O95397 391 aa7.44□□□□□ -1.22
SDCBP-210ENST00000522843 URODP06132 367 aa7.44□□□□□ -1.22
SDCBP-210ENST00000522843 RPL17P18621 184 aaKnown RBP7.44□□□□□ -1.22
SDCBP-210ENST00000522843 FNTBP49356 437 aa7.44□□□□□ -1.22
SDCBP-210ENST00000522843 GLUD2P49448 558 aa7.44□□□□□ -1.22
SDCBP-210ENST00000522843 SATB1Q01826 763 aa7.44□□□□□ -1.22
SDCBP-210ENST00000522843 DSG1Q02413 1049 aa7.44□□□□□ -1.22
SDCBP-210ENST00000522843 RNASELQ05823 741 aaKnown RBP7.44□□□□□ -1.22
SDCBP-210ENST00000522843 ADCY1Q08828 1119 aa7.44□□□□□ -1.22
SDCBP-210ENST00000522843 SIM2Q14190 667 aaPredicted RBP7.44□□□□□ -1.22
SDCBP-210ENST00000522843 SSPNQ14714 243 aa7.44□□□□□ -1.22
SDCBP-210ENST00000522843 CEP55Q53EZ4 464 aa7.44□□□□□ -1.22
SDCBP-210ENST00000522843 SOWAHCQ53LP3 525 aaPredicted RBP7.44□□□□□ -1.22
SDCBP-210ENST00000522843 FAM160B1Q5W0V3 765 aa7.44□□□□□ -1.22
SDCBP-210ENST00000522843 IL31Q6EBC2 164 aa7.44□□□□□ -1.22
SDCBP-210ENST00000522843 GLB1LQ6UWU2 654 aa7.44□□□□□ -1.22
SDCBP-210ENST00000522843 TICAM2Q86XR7 235 aa7.44□□□□□ -1.22
SDCBP-210ENST00000522843 PHKBQ93100 1093 aa7.44□□□□□ -1.22
SDCBP-210ENST00000522843 MBOAT7Q96N66 472 aa7.44□□□□□ -1.22
SDCBP-210ENST00000522843 TMEM175Q9BSA9 504 aa7.44□□□□□ -1.22
SDCBP-210ENST00000522843 LSM14BQ9BX40 385 aaKnown RBP7.44□□□□□ -1.22
SDCBP-210ENST00000522843 RWDD1Q9H446 243 aaPredicted RBP7.44□□□□□ -1.22
SDCBP-210ENST00000522843 PLEKHA4Q9H4M7 779 aa7.44□□□□□ -1.22
SDCBP-210ENST00000522843 LY9Q9HBG7 655 aa7.44□□□□□ -1.22
SDCBP-210ENST00000522843 CHST12Q9NRB3 414 aa7.44□□□□□ -1.22
SDCBP-210ENST00000522843 CHST7Q9NS84 486 aa7.44□□□□□ -1.22
SDCBP-210ENST00000522843 C2orf42Q9NWW7 574 aa7.44□□□□□ -1.22
SDCBP-210ENST00000522843 DACT1Q9NYF0 836 aa7.44□□□□□ -1.22
SDCBP-210ENST00000522843 FAN1Q9Y2M0 1017 aa7.44□□□□□ -1.22
SDCBP-210ENST00000522843 PRG3Q9Y2Y8 225 aaPredicted RBP7.44□□□□□ -1.22
SDCBP-210ENST00000522843 ZFP37Q9Y6Q3 630 aaPredicted RBP7.44□□□□□ -1.22
SDCBP-210ENST00000522843 MYH9P35579 1960 aaKnown RBP7.44□□□□□ -1.22
SDCBP-210ENST00000522843 BPTFQ12830 3046 aa7.43□□□□□ -1.22
SDCBP-210ENST00000522843 FAM86B1E9PN63 330 aa7.43□□□□□ -1.22
SDCBP-210ENST00000522843 K7ESF4 209 aa7.43□□□□□ -1.22
SDCBP-210ENST00000522843 MAGEB2O15479 319 aa7.43□□□□□ -1.22
SDCBP-210ENST00000522843 POMCP01189 267 aa7.43□□□□□ -1.22
SDCBP-210ENST00000522843 IGHDP01880 384 aa7.43□□□□□ -1.22
SDCBP-210ENST00000522843 ALDH2P05091 517 aa7.43□□□□□ -1.22
SDCBP-210ENST00000522843 FAM86B2P0C5J1 330 aa7.43□□□□□ -1.22
SDCBP-210ENST00000522843 PLCG1P19174 1290 aa7.43□□□□□ -1.22
SDCBP-210ENST00000522843 ANTXR2P58335 489 aa7.43□□□□□ -1.22
SDCBP-210ENST00000522843 PFKPQ01813 784 aa7.43□□□□□ -1.22
SDCBP-210ENST00000522843 UBXN11Q5T124 520 aa7.43□□□□□ -1.22
SDCBP-210ENST00000522843 STPG1Q5TH74 334 aa7.43□□□□□ -1.22
SDCBP-210ENST00000522843 CWC27Q6UX04 472 aaKnown RBP7.43□□□□□ -1.22
SDCBP-210ENST00000522843 ZNF852Q6ZMS4 543 aa7.43□□□□□ -1.22
SDCBP-210ENST00000522843 RELL1Q8IUW5 271 aa7.43□□□□□ -1.22
SDCBP-210ENST00000522843 COLGALT2Q8IYK4 626 aa7.43□□□□□ -1.22
SDCBP-210ENST00000522843 GATAD2BQ8WXI9 593 aa7.43□□□□□ -1.22
SDCBP-210ENST00000522843 RSPH1Q8WYR4 309 aa7.43□□□□□ -1.22
SDCBP-210ENST00000522843 RRP36Q96EU6 259 aaKnown RBP7.43□□□□□ -1.22
SDCBP-210ENST00000522843 RHOVQ96L33 236 aa7.43□□□□□ -1.22
SDCBP-210ENST00000522843 TMEM74Q96NL1 305 aa7.43□□□□□ -1.22
SDCBP-210ENST00000522843 CEP89Q96ST8 783 aa7.43□□□□□ -1.22
SDCBP-210ENST00000522843 MAP7D2Q96T17 732 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms