RNA–Protein interactions for RNA: ENST00000522774.1

RAB11FIP1-204, Transcript of RAB11 family interacting protein 1, humanhuman

TSL 1 (best)

Gene RAB11FIP1, Length 3,078 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP1-204ENST00000522774 POC1B-GALNT4F8VUJ3 575 aa11.29□□□□□ -0.6
RAB11FIP1-204ENST00000522774 RASA4O43374 803 aa11.29□□□□□ -0.6
RAB11FIP1-204ENST00000522774 SNX3O60493 162 aa11.29□□□□□ -0.6
RAB11FIP1-204ENST00000522774 OAS1P00973 400 aaKnown RBP11.29□□□□□ -0.6
RAB11FIP1-204ENST00000522774 ADORA2AP29274 412 aa11.29□□□□□ -0.6
RAB11FIP1-204ENST00000522774 GABRB2P47870 512 aa11.29□□□□□ -0.6
RAB11FIP1-204ENST00000522774 NDST1P52848 882 aa11.29□□□□□ -0.6
RAB11FIP1-204ENST00000522774 NRLP54845 237 aa11.29□□□□□ -0.6
RAB11FIP1-204ENST00000522774 POU5F1BQ06416 359 aa11.29□□□□□ -0.6
RAB11FIP1-204ENST00000522774 MYO1EQ12965 1108 aa11.29□□□□□ -0.6
RAB11FIP1-204ENST00000522774 ITIH4Q14624 930 aa11.29□□□□□ -0.6
RAB11FIP1-204ENST00000522774 TMEM132DQ14C87 1099 aa11.29□□□□□ -0.6
RAB11FIP1-204ENST00000522774 ZNF792Q3KQV3 632 aa11.29□□□□□ -0.6
RAB11FIP1-204ENST00000522774 FAM102AQ5T9C2 384 aaPredicted RBP11.29□□□□□ -0.6
RAB11FIP1-204ENST00000522774 IFNLR1Q8IU57 520 aaPredicted RBP11.29□□□□□ -0.6
RAB11FIP1-204ENST00000522774 ANKMY2Q8IV38 441 aa11.29□□□□□ -0.6
RAB11FIP1-204ENST00000522774 ANKS4BQ8N8V4 417 aa11.29□□□□□ -0.6
RAB11FIP1-204ENST00000522774 KDM4CQ9H3R0 1056 aa11.29□□□□□ -0.6
RAB11FIP1-204ENST00000522774 ASB7Q9H672 318 aa11.29□□□□□ -0.6
RAB11FIP1-204ENST00000522774 VPS37BQ9H9H4 285 aa11.29□□□□□ -0.6
RAB11FIP1-204ENST00000522774 WDR35Q9P2L0 1181 aa11.29□□□□□ -0.6
RAB11FIP1-204ENST00000522774 FARP1Q9Y4F1 1045 aaPredicted RBP11.29□□□□□ -0.6
RAB11FIP1-204ENST00000522774 TSPAN1O60635 241 aa11.29□□□□□ -0.6
RAB11FIP1-204ENST00000522774 ATICP31939 592 aa11.29□□□□□ -0.6
RAB11FIP1-204ENST00000522774 CTCFP49711 727 aaPredicted RBP11.29□□□□□ -0.6
RAB11FIP1-204ENST00000522774 PDIA2Q13087 525 aaKnown RBP11.29□□□□□ -0.6
RAB11FIP1-204ENST00000522774 MTM1Q13496 603 aa11.29□□□□□ -0.6
RAB11FIP1-204ENST00000522774 ZKSCAN8Q15776 578 aaPredicted RBP11.29□□□□□ -0.6
RAB11FIP1-204ENST00000522774 MSS51Q4VC12 460 aa11.29□□□□□ -0.6
RAB11FIP1-204ENST00000522774 UNC45BQ8IWX7 931 aa11.29□□□□□ -0.6
RAB11FIP1-204ENST00000522774 SHCBP1Q8NEM2 672 aa11.29□□□□□ -0.6
RAB11FIP1-204ENST00000522774 NLRP7Q8WX94 980 aa11.29□□□□□ -0.6
RAB11FIP1-204ENST00000522774 CPT1BQ92523 772 aa11.29□□□□□ -0.6
RAB11FIP1-204ENST00000522774 MRRFQ96E11 262 aaKnown RBP11.29□□□□□ -0.6
RAB11FIP1-204ENST00000522774 C16orf70Q9BSU1 422 aa11.29□□□□□ -0.6
RAB11FIP1-204ENST00000522774 ADAM33Q9BZ11 813 aa11.29□□□□□ -0.6
RAB11FIP1-204ENST00000522774 NSRP1Q9H0G5 558 aaKnown RBP11.29□□□□□ -0.6
RAB11FIP1-204ENST00000522774 VRTNQ9H8Y1 702 aa11.29□□□□□ -0.6
RAB11FIP1-204ENST00000522774 KIF9Q9HAQ2 790 aa11.29□□□□□ -0.6
RAB11FIP1-204ENST00000522774 SLC40A1Q9NP59 571 aa11.29□□□□□ -0.6
RAB11FIP1-204ENST00000522774 ABCF3Q9NUQ8 709 aa11.29□□□□□ -0.6
RAB11FIP1-204ENST00000522774 SHOC2Q9UQ13 582 aa11.29□□□□□ -0.6
RAB11FIP1-204ENST00000522774 EFR3BQ9Y2G0 817 aa11.29□□□□□ -0.6
RAB11FIP1-204ENST00000522774 TRIP11Q15643 1979 aa11.29□□□□□ -0.6
RAB11FIP1-204ENST00000522774 TCRBV7S3A2A0A539 114 aa11.29□□□□□ -0.6
RAB11FIP1-204ENST00000522774 ALOX15BO15296 676 aa11.29□□□□□ -0.6
RAB11FIP1-204ENST00000522774 MAGEB2O15479 319 aa11.29□□□□□ -0.6
RAB11FIP1-204ENST00000522774 SPAG7O75391 227 aa11.29□□□□□ -0.6
RAB11FIP1-204ENST00000522774 TRUB2O95900 331 aaKnown RBP11.29□□□□□ -0.6
RAB11FIP1-204ENST00000522774 RPL22P35268 128 aaKnown RBP11.29□□□□□ -0.6
RAB11FIP1-204ENST00000522774 MMRN1Q13201 1228 aa11.29□□□□□ -0.6
RAB11FIP1-204ENST00000522774 NUGGCQ68CJ6 796 aa11.29□□□□□ -0.6
RAB11FIP1-204ENST00000522774 MTHFD1LQ6UB35 978 aa11.29□□□□□ -0.6
RAB11FIP1-204ENST00000522774 CEP128Q6ZU80 1094 aa11.29□□□□□ -0.6
RAB11FIP1-204ENST00000522774 RFX6Q8HWS3 928 aa11.29□□□□□ -0.6
RAB11FIP1-204ENST00000522774 C12orf29Q8N999 325 aa11.29□□□□□ -0.6
RAB11FIP1-204ENST00000522774 KCTD6Q8NC69 237 aa11.29□□□□□ -0.6
RAB11FIP1-204ENST00000522774 PPTC7Q8NI37 304 aa11.29□□□□□ -0.6
RAB11FIP1-204ENST00000522774 TTC25Q96NG3 672 aa11.29□□□□□ -0.6
RAB11FIP1-204ENST00000522774 ADPGKQ9BRR6 497 aa11.29□□□□□ -0.6
RAB11FIP1-204ENST00000522774 WDR83Q9BRX9 315 aaKnown RBP11.29□□□□□ -0.6
RAB11FIP1-204ENST00000522774 CYP3A43Q9HB55 503 aa11.29□□□□□ -0.6
RAB11FIP1-204ENST00000522774 GGT7Q9UJ14 662 aa11.29□□□□□ -0.6
RAB11FIP1-204ENST00000522774 USP18Q9UMW8 372 aa11.29□□□□□ -0.6
RAB11FIP1-204ENST00000522774 CITO14578 2027 aa11.29□□□□□ -0.6
RAB11FIP1-204ENST00000522774 RASSF9O75901 435 aa11.28□□□□□ -0.6
RAB11FIP1-204ENST00000522774 VDRP11473 427 aa11.28□□□□□ -0.6
RAB11FIP1-204ENST00000522774 GPX6P59796 221 aa11.28□□□□□ -0.6
RAB11FIP1-204ENST00000522774 C15orf59Q2T9L4 293 aaPredicted RBP11.28□□□□□ -0.6
RAB11FIP1-204ENST00000522774 FNBP1LQ5T0N5 605 aa11.28□□□□□ -0.6
RAB11FIP1-204ENST00000522774 C9orf131Q5VYM1 1079 aa11.28□□□□□ -0.6
RAB11FIP1-204ENST00000522774 NPNTQ6UXI9 565 aa11.28□□□□□ -0.6
RAB11FIP1-204ENST00000522774 CYP4V2Q6ZWL3 525 aaPredicted RBP11.28□□□□□ -0.6
RAB11FIP1-204ENST00000522774 TRABD2AQ86V40 505 aa11.28□□□□□ -0.6
RAB11FIP1-204ENST00000522774 FAXDC2Q96IV6 333 aa11.28□□□□□ -0.6
RAB11FIP1-204ENST00000522774 CALN1Q9BXU9 219 aa11.28□□□□□ -0.6
RAB11FIP1-204ENST00000522774 HAUS2Q9NVX0 235 aa11.28□□□□□ -0.6
RAB11FIP1-204ENST00000522774 DPP3Q9NY33 737 aa11.28□□□□□ -0.6
RAB11FIP1-204ENST00000522774 BARX2Q9UMQ3 279 aaPredicted RBP11.28□□□□□ -0.6
RAB11FIP1-204ENST00000522774 CLUHO75153 1309 aa11.28□□□□□ -0.6
RAB11FIP1-204ENST00000522774 LOC102724159A0A0B4J2E5 919 aa11.28□□□□□ -0.6
RAB11FIP1-204ENST00000522774 E5RJQ4 531 aa11.28□□□□□ -0.6
RAB11FIP1-204ENST00000522774 GRAP2O75791 330 aa11.28□□□□□ -0.6
RAB11FIP1-204ENST00000522774 PIAS1O75925 651 aa11.28□□□□□ -0.6
RAB11FIP1-204ENST00000522774 HMGCRP04035 888 aa11.28□□□□□ -0.6
RAB11FIP1-204ENST00000522774 GHRP10912 638 aa11.28□□□□□ -0.6
RAB11FIP1-204ENST00000522774 STX2P32856 288 aa11.28□□□□□ -0.6
RAB11FIP1-204ENST00000522774 SCN1AP35498 2009 aa11.28□□□□□ -0.6
RAB11FIP1-204ENST00000522774 WDR4P57081 412 aaKnown RBP11.28□□□□□ -0.6
RAB11FIP1-204ENST00000522774 SNAPC2Q13487 334 aa11.28□□□□□ -0.6
RAB11FIP1-204ENST00000522774 PWP2Q15269 919 aaKnown RBP11.28□□□□□ -0.6
RAB11FIP1-204ENST00000522774 PKN2Q16513 984 aaKnown RBP11.28□□□□□ -0.6
RAB11FIP1-204ENST00000522774 HIF1AQ16665 826 aa11.28□□□□□ -0.6
RAB11FIP1-204ENST00000522774 MARCH8Q5T0T0 291 aa11.28□□□□□ -0.6
RAB11FIP1-204ENST00000522774 FAM183BPQ6ZVS7 135 aa11.28□□□□□ -0.6
RAB11FIP1-204ENST00000522774 CENPUQ71F23 418 aa11.28□□□□□ -0.6
RAB11FIP1-204ENST00000522774 RIBC1Q8N443 379 aaPredicted RBP11.28□□□□□ -0.6
RAB11FIP1-204ENST00000522774 CMASQ8NFW8 434 aaPredicted RBP11.28□□□□□ -0.6
RAB11FIP1-204ENST00000522774 P3H4Q92791 437 aa11.28□□□□□ -0.6
RAB11FIP1-204ENST00000522774 TGS1Q96RS0 853 aaKnown RBP11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms