RNA–Protein interactions for RNA: ENST00000521951.1

PVT1-212, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best) BASIC

Gene PVT1, Length 1,535 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-212ENST00000521951 PLEKP08567 350 aaPredicted RBP25.59■■□□□ 1.69
PVT1-212ENST00000521951 HAPLN1P10915 354 aaPredicted RBP25.59■■□□□ 1.69
PVT1-212ENST00000521951 ELF1P32519 619 aa25.59■■□□□ 1.69
PVT1-212ENST00000521951 CACNA2D1P54289 1103 aa25.59■■□□□ 1.69
PVT1-212ENST00000521951 GSDMDP57764 484 aa25.59■■□□□ 1.69
PVT1-212ENST00000521951 FMO1Q01740 532 aa25.59■■□□□ 1.69
PVT1-212ENST00000521951 TDRD12Q587J7 1177 aaKnown RBP25.59■■□□□ 1.69
PVT1-212ENST00000521951 TCEAL8Q8IYN2 117 aa25.59■■□□□ 1.69
PVT1-212ENST00000521951 UBA3Q8TBC4 463 aa25.59■■□□□ 1.69
PVT1-212ENST00000521951 PPP2R3CQ969Q6 453 aa25.59■■□□□ 1.69
PVT1-212ENST00000521951 SMARCD1Q96GM5 515 aa25.59■■□□□ 1.69
PVT1-212ENST00000521951 DUSP16Q9BY84 665 aa25.59■■□□□ 1.69
PVT1-212ENST00000521951 CYP4F11Q9HBI6 524 aa25.59■■□□□ 1.69
PVT1-212ENST00000521951 KRT82Q9NSB4 513 aa25.59■■□□□ 1.69
PVT1-212ENST00000521951 TMEM30AQ9NV96 361 aa25.59■■□□□ 1.69
PVT1-212ENST00000521951 ARHGAP20Q9P2F6 1191 aa25.59■■□□□ 1.69
PVT1-212ENST00000521951 FBXW11Q9UKB1 542 aa25.59■■□□□ 1.69
PVT1-212ENST00000521951 M0QYV0 167 aa25.58■■□□□ 1.69
PVT1-212ENST00000521951 AP1G2O75843 785 aa25.58■■□□□ 1.69
PVT1-212ENST00000521951 FAM200BP0CF97 657 aa25.58■■□□□ 1.69
PVT1-212ENST00000521951 MAGEA11P43364 429 aa25.58■■□□□ 1.69
PVT1-212ENST00000521951 PKDCCQ504Y2 493 aa25.58■■□□□ 1.69
PVT1-212ENST00000521951 TCEAL5Q5H9L2 206 aa25.58■■□□□ 1.69
PVT1-212ENST00000521951 DENND1BQ6P3S1 775 aa25.58■■□□□ 1.69
PVT1-212ENST00000521951 KREMEN2Q8NCW0 462 aa25.58■■□□□ 1.69
PVT1-212ENST00000521951 SMOQ99835 787 aa25.58■■□□□ 1.69
PVT1-212ENST00000521951 PDCL3Q9H2J4 239 aa25.58■■□□□ 1.69
PVT1-212ENST00000521951 HSFX1Q9UBD0 423 aa25.58■■□□□ 1.69
PVT1-212ENST00000521951 BEST1O76090 585 aa25.58■■□□□ 1.68
PVT1-212ENST00000521951 EPCAMP16422 314 aa25.58■■□□□ 1.68
PVT1-212ENST00000521951 IGFBP4P22692 258 aa25.58■■□□□ 1.68
PVT1-212ENST00000521951 GTF2F1P35269 517 aaKnown RBP eCLIP25.58■■□□□ 1.683e-6■■□□□ 13.2
PVT1-212ENST00000521951 MGAT5BQ3V5L5 792 aa25.58■■□□□ 1.68
PVT1-212ENST00000521951 VSTM1Q6UX27 236 aa25.58■■□□□ 1.68
PVT1-212ENST00000521951 CLEC20AQ6ZU45 233 aa25.58■■□□□ 1.68
PVT1-212ENST00000521951 OLIG1Q8TAK6 271 aa25.58■■□□□ 1.68
PVT1-212ENST00000521951 GAS2L1Q99501 681 aaPredicted RBP25.58■■□□□ 1.68
PVT1-212ENST00000521951 CDCA3Q99618 268 aaPredicted RBP25.58■■□□□ 1.68
PVT1-212ENST00000521951 CHP1Q99653 195 aa25.58■■□□□ 1.68
PVT1-212ENST00000521951 PRRG1O14668 218 aa25.57■■□□□ 1.68
PVT1-212ENST00000521951 NPR3P17342 541 aa25.57■■□□□ 1.68
PVT1-212ENST00000521951 TNFAIP3P21580 790 aa25.57■■□□□ 1.68
PVT1-212ENST00000521951 BCAT1P54687 386 aa25.57■■□□□ 1.68
PVT1-212ENST00000521951 CDK17Q00537 523 aa25.57■■□□□ 1.68
PVT1-212ENST00000521951 PASD1Q8IV76 773 aa25.57■■□□□ 1.68
PVT1-212ENST00000521951 SCN4BQ8IWT1 228 aa25.57■■□□□ 1.68
PVT1-212ENST00000521951 ZMIZ2Q8NF64 920 aa25.57■■□□□ 1.68
PVT1-212ENST00000521951 KCNK16Q96T55 309 aa25.57■■□□□ 1.68
PVT1-212ENST00000521951 PCDHB18PQ96TA0 734 aa25.57■■□□□ 1.68
PVT1-212ENST00000521951 SEPT5Q99719 369 aaPredicted RBP25.57■■□□□ 1.68
PVT1-212ENST00000521951 LHX5Q9H2C1 402 aa25.57■■□□□ 1.68
PVT1-212ENST00000521951 IGFLR1Q9H665 355 aa25.57■■□□□ 1.68
PVT1-212ENST00000521951 CSNK1G1Q9HCP0 422 aa25.57■■□□□ 1.68
PVT1-212ENST00000521951 HCFC2Q9Y5Z7 792 aa25.57■■□□□ 1.68
PVT1-212ENST00000521951 SOAT2O75908 522 aa25.56■■□□□ 1.68
PVT1-212ENST00000521951 EIF4A3P38919 411 aaKnown RBP25.56■■□□□ 1.68
PVT1-212ENST00000521951 GRIK1P39086 918 aa25.56■■□□□ 1.68
PVT1-212ENST00000521951 GPD2P43304 727 aa25.56■■□□□ 1.68
PVT1-212ENST00000521951 TUFMP49411 452 aaKnown RBP25.56■■□□□ 1.68
PVT1-212ENST00000521951 MAP3K7CLP57077 242 aa25.56■■□□□ 1.68
PVT1-212ENST00000521951 PDE4CQ08493 712 aa25.56■■□□□ 1.68
PVT1-212ENST00000521951 BST2Q10589 180 aaKnown RBP25.56■■□□□ 1.68
PVT1-212ENST00000521951 HYAL1Q12794 435 aa25.56■■□□□ 1.68
PVT1-212ENST00000521951 SECISBP2LQ93073 1101 aaKnown RBP25.56■■□□□ 1.68
PVT1-212ENST00000521951 F8VP50 259 aa25.55■■□□□ 1.68
PVT1-212ENST00000521951 FECHP22830 423 aa25.55■■□□□ 1.68
PVT1-212ENST00000521951 GPR15P49685 360 aa25.55■■□□□ 1.68
PVT1-212ENST00000521951 RBM10P98175 930 aaKnown RBP25.55■■□□□ 1.68
PVT1-212ENST00000521951 KCNC3Q14003 757 aa25.55■■□□□ 1.68
PVT1-212ENST00000521951 DDR2Q16832 855 aa25.55■■□□□ 1.68
PVT1-212ENST00000521951 LLGL2Q6P1M3 1020 aa25.55■■□□□ 1.68
PVT1-212ENST00000521951 WDTC1Q8N5D0 677 aa25.55■■□□□ 1.68
PVT1-212ENST00000521951 PLEKHA4Q9H4M7 779 aa25.55■■□□□ 1.68
PVT1-212ENST00000521951 DMAP1Q9NPF5 467 aaPredicted RBP25.55■■□□□ 1.68
PVT1-212ENST00000521951 MAN1C1Q9NR34 630 aa25.55■■□□□ 1.68
PVT1-212ENST00000521951 SEPT11Q9NVA2 429 aaKnown RBP25.55■■□□□ 1.68
PVT1-212ENST00000521951 TULP2O00295 520 aa25.54■■□□□ 1.68
PVT1-212ENST00000521951 SETSIPP0DME0 302 aa25.54■■□□□ 1.68
PVT1-212ENST00000521951 MAPK8IP2Q13387 824 aaPredicted RBP25.54■■□□□ 1.68
PVT1-212ENST00000521951 CCDC149Q6ZUS6 474 aa25.54■■□□□ 1.68
PVT1-212ENST00000521951 DEFB123Q8N688 67 aa25.54■■□□□ 1.68
PVT1-212ENST00000521951 VN1R2Q8NFZ6 395 aa25.54■■□□□ 1.68
PVT1-212ENST00000521951 SLC7A14Q8TBB6 771 aa25.54■■□□□ 1.68
PVT1-212ENST00000521951 HDAC7Q8WUI4 952 aa25.54■■□□□ 1.68
PVT1-212ENST00000521951 SLC35F5Q8WV83 523 aa25.54■■□□□ 1.68
PVT1-212ENST00000521951 C8orf48Q96LL4 319 aa25.54■■□□□ 1.68
PVT1-212ENST00000521951 CDX2Q99626 313 aaPredicted RBP25.54■■□□□ 1.68
PVT1-212ENST00000521951 YIPF1Q9Y548 306 aa25.54■■□□□ 1.68
PVT1-212ENST00000521951 INSL5Q9Y5Q6 135 aa25.54■■□□□ 1.68
PVT1-212ENST00000521951 SSU72P8A0A1W2PR75 194 aa25.53■■□□□ 1.68
PVT1-212ENST00000521951 DDX3XO00571 662 aaKnown RBP eCLIP25.53■■□□□ 1.68
PVT1-212ENST00000521951 TRIM66O15016 1216 aa25.53■■□□□ 1.68
PVT1-212ENST00000521951 CYP1A1P04798 512 aaPredicted RBP25.53■■□□□ 1.68
PVT1-212ENST00000521951 C8AP07357 584 aa25.53■■□□□ 1.68
PVT1-212ENST00000521951 CDH5P33151 784 aaPredicted RBP25.53■■□□□ 1.68
PVT1-212ENST00000521951 SLC8A3P57103 927 aa25.53■■□□□ 1.68
PVT1-212ENST00000521951 RPL10AP62906 217 aaKnown RBP25.53■■□□□ 1.68
PVT1-212ENST00000521951 CCDC173Q0VFZ6 552 aa25.53■■□□□ 1.68
PVT1-212ENST00000521951 LIN9Q5TKA1 542 aa25.53■■□□□ 1.68
PVT1-212ENST00000521951 SDHAF4Q5VUM1 108 aa25.53■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms