RNA–Protein interactions for RNA: ENST00000521865.5

PABPC1-218, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-218ENST00000521865 AMPD3Q01432 767 aa22.31■■□□□ 1.16
PABPC1-218ENST00000521865 CYP27A1Q02318 531 aa22.31■■□□□ 1.16
PABPC1-218ENST00000521865 PSMD2Q13200 908 aa22.31■■□□□ 1.16
PABPC1-218ENST00000521865 MAPRE1Q15691 268 aaKnown RBP22.31■■□□□ 1.16
PABPC1-218ENST00000521865 RDH13Q8NBN7 331 aa22.31■■□□□ 1.16
PABPC1-218ENST00000521865 OSCP1Q8WVF1 389 aa22.31■■□□□ 1.16
PABPC1-218ENST00000521865 GAB3Q8WWW8 586 aa22.31■■□□□ 1.16
PABPC1-218ENST00000521865 ATP2A3Q93084 1043 aa22.31■■□□□ 1.16
PABPC1-218ENST00000521865 MYLPFQ96A32 169 aa22.31■■□□□ 1.16
PABPC1-218ENST00000521865 DHX58Q96C10 678 aa22.31■■□□□ 1.16
PABPC1-218ENST00000521865 SLC22A12Q96S37 553 aa22.31■■□□□ 1.16
PABPC1-218ENST00000521865 ECT2Q9H8V3 914 aa22.31■■□□□ 1.16
PABPC1-218ENST00000521865 FBRSL1Q9HCM7 1045 aaKnown RBP22.31■■□□□ 1.16
PABPC1-218ENST00000521865 TCHHQ07283 1943 aa22.31■■□□□ 1.16
PABPC1-218ENST00000521865 SPTLC2O15270 562 aa22.3■■□□□ 1.16
PABPC1-218ENST00000521865 KCNA4P22459 653 aa22.3■■□□□ 1.16
PABPC1-218ENST00000521865 BDNFP23560 247 aa22.3■■□□□ 1.16
PABPC1-218ENST00000521865 LMO2P25791 158 aa22.3■■□□□ 1.16
PABPC1-218ENST00000521865 ANXA13P27216 316 aa22.3■■□□□ 1.16
PABPC1-218ENST00000521865 MAGEA11P43364 429 aa22.3■■□□□ 1.16
PABPC1-218ENST00000521865 ZNF77Q15935 545 aa22.3■■□□□ 1.16
PABPC1-218ENST00000521865 AASDHQ4L235 1098 aaPredicted RBP22.3■■□□□ 1.16
PABPC1-218ENST00000521865 FAM171BQ6P995 826 aa22.3■■□□□ 1.16
PABPC1-218ENST00000521865 CACNA2D4Q7Z3S7 1137 aa22.3■■□□□ 1.16
PABPC1-218ENST00000521865 WDR49Q8IV35 697 aa22.3■■□□□ 1.16
PABPC1-218ENST00000521865 LINC00301Q8NCQ3 95 aa22.3■■□□□ 1.16
PABPC1-218ENST00000521865 SH3RF2Q8TEC5 729 aa22.3■■□□□ 1.16
PABPC1-218ENST00000521865 KBTBD7Q8WVZ9 684 aa22.3■■□□□ 1.16
PABPC1-218ENST00000521865 TRIM9Q9C026 710 aa22.3■■□□□ 1.16
PABPC1-218ENST00000521865 ARRDC1-AS1Q9H2J1 176 aa22.3■■□□□ 1.16
PABPC1-218ENST00000521865 KIAA1586Q9HCI6 787 aa22.3■■□□□ 1.16
PABPC1-218ENST00000521865 CCDC163A0A0D9SF12 145 aa22.29■■□□□ 1.16
PABPC1-218ENST00000521865 C2orf78A6NCI8 922 aa22.29■■□□□ 1.16
PABPC1-218ENST00000521865 GDF9O60383 454 aa22.29■■□□□ 1.16
PABPC1-218ENST00000521865 DLATP10515 647 aaKnown RBP22.29■■□□□ 1.16
PABPC1-218ENST00000521865 HDCP19113 662 aa22.29■■□□□ 1.16
PABPC1-218ENST00000521865 TNNI1P19237 187 aa22.29■■□□□ 1.16
PABPC1-218ENST00000521865 NR1H3Q13133 447 aa22.29■■□□□ 1.16
PABPC1-218ENST00000521865 FBXO43Q4G163 708 aa22.29■■□□□ 1.16
PABPC1-218ENST00000521865 NAIF1Q69YI7 327 aaPredicted RBP22.29■■□□□ 1.16
PABPC1-218ENST00000521865 VSTM1Q6UX27 236 aa22.29■■□□□ 1.16
PABPC1-218ENST00000521865 C12orf50Q8NA57 414 aaPredicted RBP22.29■■□□□ 1.16
PABPC1-218ENST00000521865 CD101Q93033 1021 aa22.29■■□□□ 1.16
PABPC1-218ENST00000521865 ZNF396Q96N95 335 aaPredicted RBP22.29■■□□□ 1.16
PABPC1-218ENST00000521865 HHIPQ96QV1 700 aa22.29■■□□□ 1.16
PABPC1-218ENST00000521865 FNBP1Q96RU3 617 aa22.29■■□□□ 1.16
PABPC1-218ENST00000521865 SNX25Q9H3E2 840 aa22.29■■□□□ 1.16
PABPC1-218ENST00000521865 CUEDC2Q9H467 287 aa22.29■■□□□ 1.16
PABPC1-218ENST00000521865 POLR3BQ9NW08 1133 aaPredicted RBP22.29■■□□□ 1.16
PABPC1-218ENST00000521865 TFIP11Q9UBB9 837 aaKnown RBP22.29■■□□□ 1.16
PABPC1-218ENST00000521865 K7ELQ4 463 aaPredicted RBP22.28■■□□□ 1.16
PABPC1-218ENST00000521865 PDE6CP51160 858 aa22.28■■□□□ 1.16
PABPC1-218ENST00000521865 USP4Q13107 963 aa22.28■■□□□ 1.16
PABPC1-218ENST00000521865 CCDC6Q16204 474 aa22.28■■□□□ 1.16
PABPC1-218ENST00000521865 SNRNP35Q16560 246 aaKnown RBP22.28■■□□□ 1.16
PABPC1-218ENST00000521865 PPM1JQ5JR12 505 aa22.28■■□□□ 1.16
PABPC1-218ENST00000521865 DENND5BQ6ZUT9 1274 aa22.28■■□□□ 1.16
PABPC1-218ENST00000521865 HS2ST1Q7LGA3 356 aa22.28■■□□□ 1.16
PABPC1-218ENST00000521865 TRAPPC11Q7Z392 1133 aa22.28■■□□□ 1.16
PABPC1-218ENST00000521865 KBTBD6Q86V97 674 aa22.28■■□□□ 1.16
PABPC1-218ENST00000521865 CAMKK1Q8N5S9 505 aa22.28■■□□□ 1.16
PABPC1-218ENST00000521865 RPLP0P6Q8NHW5 317 aa22.28■■□□□ 1.16
PABPC1-218ENST00000521865 CNTNAP3BQ96NU0 1288 aa22.28■■□□□ 1.16
PABPC1-218ENST00000521865 CNTNAP3Q9BZ76 1288 aa22.28■■□□□ 1.16
PABPC1-218ENST00000521865 CRTAC1Q9NQ79 661 aa22.28■■□□□ 1.16
PABPC1-218ENST00000521865 KBTBD4Q9NVX7 518 aa22.28■■□□□ 1.16
PABPC1-218ENST00000521865 TRPM5Q9NZQ8 1165 aa22.28■■□□□ 1.16
PABPC1-218ENST00000521865 EIF3DO15371 548 aaKnown RBP eCLIP22.27■■□□□ 1.16
PABPC1-218ENST00000521865 PPP6R2O75170 966 aa22.27■■□□□ 1.16
PABPC1-218ENST00000521865 WARSP23381 471 aaKnown RBP22.27■■□□□ 1.16
PABPC1-218ENST00000521865 CYP2J2P51589 502 aa22.27■■□□□ 1.16
PABPC1-218ENST00000521865 E2F4Q16254 413 aa22.27■■□□□ 1.16
PABPC1-218ENST00000521865 EML3Q32P44 896 aa22.27■■□□□ 1.16
PABPC1-218ENST00000521865 MDH1BQ5I0G3 518 aa22.27■■□□□ 1.16
PABPC1-218ENST00000521865 FAM26FQ5R3K3 315 aa22.27■■□□□ 1.16
PABPC1-218ENST00000521865 IL31Q6EBC2 164 aa22.27■■□□□ 1.16
PABPC1-218ENST00000521865 NELFCDQ8IXH7 590 aa22.27■■□□□ 1.16
PABPC1-218ENST00000521865 IQUBQ8NA54 791 aa22.27■■□□□ 1.16
PABPC1-218ENST00000521865 OR6B3Q8NGW1 331 aa22.27■■□□□ 1.16
PABPC1-218ENST00000521865 CCDC127Q96BQ5 260 aa22.27■■□□□ 1.16
PABPC1-218ENST00000521865 LOXL4Q96JB6 756 aa22.27■■□□□ 1.16
PABPC1-218ENST00000521865 SPATA17Q96L03 361 aa22.27■■□□□ 1.16
PABPC1-218ENST00000521865 AGPAT3Q9NRZ7 376 aa22.27■■□□□ 1.16
PABPC1-218ENST00000521865 EHD2Q9NZN4 543 aa22.27■■□□□ 1.16
PABPC1-218ENST00000521865 GCNT4Q9P109 453 aa22.27■■□□□ 1.16
PABPC1-218ENST00000521865 TRIM66O15016 1216 aa22.26■■□□□ 1.15
PABPC1-218ENST00000521865 CLIC2O15247 247 aa22.26■■□□□ 1.15
PABPC1-218ENST00000521865 CLSTN1O94985 981 aa22.26■■□□□ 1.15
PABPC1-218ENST00000521865 NFATC1O95644 943 aa22.26■■□□□ 1.15
PABPC1-218ENST00000521865 ABL1P00519 1130 aa22.26■■□□□ 1.15
PABPC1-218ENST00000521865 HOXD13P35453 343 aa22.26■■□□□ 1.15
PABPC1-218ENST00000521865 GNL1P36915 607 aaPredicted RBP22.26■■□□□ 1.15
PABPC1-218ENST00000521865 TNNC1P63316 161 aa22.26■■□□□ 1.15
PABPC1-218ENST00000521865 SF3A2Q15428 464 aaKnown RBP22.26■■□□□ 1.15
PABPC1-218ENST00000521865 FOXD4L5Q5VV16 416 aaPredicted RBP22.26■■□□□ 1.15
PABPC1-218ENST00000521865 LIMS2Q7Z4I7 341 aa22.26■■□□□ 1.15
PABPC1-218ENST00000521865 MYCBPAPQ8TBZ2 947 aa22.26■■□□□ 1.15
PABPC1-218ENST00000521865 ZNF507Q8TCN5 953 aa22.26■■□□□ 1.15
PABPC1-218ENST00000521865 FOXD4L4Q8WXT5 416 aaPredicted RBP22.26■■□□□ 1.15
PABPC1-218ENST00000521865 ACDQ96AP0 544 aa22.26■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms