RNA–Protein interactions for RNA: ENST00000521605.1

MRPS28-208, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 2 BASIC

Gene MRPS28, Length 437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-208ENST00000521605 STPG1Q5TH74 334 aa11.62□□□□□ -0.55
MRPS28-208ENST00000521605 RRAGAQ7L523 313 aa11.62□□□□□ -0.55
MRPS28-208ENST00000521605 IFNLR1Q8IU57 520 aaPredicted RBP11.62□□□□□ -0.55
MRPS28-208ENST00000521605 BSNDQ8WZ55 320 aa11.62□□□□□ -0.55
MRPS28-208ENST00000521605 STK33Q9BYT3 514 aa11.62□□□□□ -0.55
MRPS28-208ENST00000521605 ARRDC1-AS1Q9H2J1 176 aa11.62□□□□□ -0.55
MRPS28-208ENST00000521605 SIX2Q9NPC8 291 aa11.62□□□□□ -0.55
MRPS28-208ENST00000521605 MIOSQ9NXC5 875 aa11.62□□□□□ -0.55
MRPS28-208ENST00000521605 FNIP2Q9P278 1114 aa11.62□□□□□ -0.55
MRPS28-208ENST00000521605 ARHGAP20Q9P2F6 1191 aa11.62□□□□□ -0.55
MRPS28-208ENST00000521605 CACNG4Q9UBN1 327 aa11.62□□□□□ -0.55
MRPS28-208ENST00000521605 HES2Q9Y543 173 aa11.62□□□□□ -0.55
MRPS28-208ENST00000521605 IGF2RP11717 2491 aa11.61□□□□□ -0.55
MRPS28-208ENST00000521605 SRRM3A6NNA2 597 aaPredicted RBP11.61□□□□□ -0.55
MRPS28-208ENST00000521605 BTNL10A8MVZ5 291 aa11.61□□□□□ -0.55
MRPS28-208ENST00000521605 MAN2B1O00754 1011 aa11.61□□□□□ -0.55
MRPS28-208ENST00000521605 EXTL3O43909 919 aa11.61□□□□□ -0.55
MRPS28-208ENST00000521605 ECI2O75521 394 aa11.61□□□□□ -0.55
MRPS28-208ENST00000521605 ZIC2O95409 532 aaPredicted RBP11.61□□□□□ -0.55
MRPS28-208ENST00000521605 C1RP00736 705 aa11.61□□□□□ -0.55
MRPS28-208ENST00000521605 HNRNPA1P09651 372 aaKnown RBP eCLIP11.61□□□□□ -0.55
MRPS28-208ENST00000521605 FERP16591 822 aa11.61□□□□□ -0.55
MRPS28-208ENST00000521605 POLR2FP61218 127 aaKnown RBP11.61□□□□□ -0.55
MRPS28-208ENST00000521605 CREMQ03060 361 aa11.61□□□□□ -0.55
MRPS28-208ENST00000521605 DSC1Q08554 894 aa11.61□□□□□ -0.55
MRPS28-208ENST00000521605 STRN3Q13033 797 aa11.61□□□□□ -0.55
MRPS28-208ENST00000521605 SNRNP35Q16560 246 aaKnown RBP11.61□□□□□ -0.55
MRPS28-208ENST00000521605 DCAF17Q5H9S7 520 aaPredicted RBP11.61□□□□□ -0.55
MRPS28-208ENST00000521605 RTP2Q5QGT7 225 aa11.61□□□□□ -0.55
MRPS28-208ENST00000521605 TCERG1LQ5VWI1 586 aa11.61□□□□□ -0.55
MRPS28-208ENST00000521605 TANGO2Q6ICL3 276 aa11.61□□□□□ -0.55
MRPS28-208ENST00000521605 CEP57Q86XR8 500 aa11.61□□□□□ -0.55
MRPS28-208ENST00000521605 ZNF687Q8N1G0 1237 aa11.61□□□□□ -0.55
MRPS28-208ENST00000521605 RNF10Q8N5U6 811 aaKnown RBP11.61□□□□□ -0.55
MRPS28-208ENST00000521605 KDF1Q8NAX2 398 aaPredicted RBP11.61□□□□□ -0.55
MRPS28-208ENST00000521605 SMG8Q8ND04 991 aaKnown RBP11.61□□□□□ -0.55
MRPS28-208ENST00000521605 SLC7A14Q8TBB6 771 aa11.61□□□□□ -0.55
MRPS28-208ENST00000521605 HASPINQ8TF76 798 aa11.61□□□□□ -0.55
MRPS28-208ENST00000521605 PSPC1Q8WXF1 523 aaKnown RBP11.61□□□□□ -0.55
MRPS28-208ENST00000521605 FAM3CQ92520 227 aa11.61□□□□□ -0.55
MRPS28-208ENST00000521605 CBWD1Q9BRT8 395 aa11.61□□□□□ -0.55
MRPS28-208ENST00000521605 SMOC1Q9H4F8 434 aa11.61□□□□□ -0.55
MRPS28-208ENST00000521605 BRD9Q9H8M2 597 aa11.61□□□□□ -0.55
MRPS28-208ENST00000521605 IFT122Q9HBG6 1241 aa11.61□□□□□ -0.55
MRPS28-208ENST00000521605 GCNT4Q9P109 453 aa11.61□□□□□ -0.55
MRPS28-208ENST00000521605 APEX2Q9UBZ4 518 aa11.61□□□□□ -0.55
MRPS28-208ENST00000521605 DNAI1Q9UI46 699 aa11.61□□□□□ -0.55
MRPS28-208ENST00000521605 REXO2Q9Y3B8 237 aaKnown RBP11.61□□□□□ -0.55
MRPS28-208ENST00000521605 MRPS23Q9Y3D9 190 aaKnown RBP11.61□□□□□ -0.55
MRPS28-208ENST00000521605 IPPQ9Y573 584 aa11.61□□□□□ -0.55
MRPS28-208ENST00000521605 K7ERI5 159 aa11.6□□□□□ -0.55
MRPS28-208ENST00000521605 HNRNPDLO14979 420 aaKnown RBP11.6□□□□□ -0.55
MRPS28-208ENST00000521605 SRGAP2CP0DJJ0 459 aa11.6□□□□□ -0.55
MRPS28-208ENST00000521605 HOXA11P31270 313 aaPredicted RBP11.6□□□□□ -0.55
MRPS28-208ENST00000521605 HOXC13P31276 330 aa11.6□□□□□ -0.55
MRPS28-208ENST00000521605 STAT1P42224 750 aa11.6□□□□□ -0.55
MRPS28-208ENST00000521605 KIF11P52732 1056 aa11.6□□□□□ -0.55
MRPS28-208ENST00000521605 AP3M2P53677 418 aa11.6□□□□□ -0.55
MRPS28-208ENST00000521605 MYL7Q01449 175 aa11.6□□□□□ -0.55
MRPS28-208ENST00000521605 TFDP1Q14186 410 aa11.6□□□□□ -0.55
MRPS28-208ENST00000521605 GAS6Q14393 721 aa11.6□□□□□ -0.55
MRPS28-208ENST00000521605 SLC18A3Q16572 532 aa11.6□□□□□ -0.55
MRPS28-208ENST00000521605 SLC39A4Q6P5W5 647 aa11.6□□□□□ -0.55
MRPS28-208ENST00000521605 ENOSF1Q7L5Y1 443 aa11.6□□□□□ -0.55
MRPS28-208ENST00000521605 MAEAQ7L5Y9 396 aa11.6□□□□□ -0.55
MRPS28-208ENST00000521605 TAS1R3Q7RTX0 852 aa11.6□□□□□ -0.55
MRPS28-208ENST00000521605 IRF2BP2Q7Z5L9 587 aa11.6□□□□□ -0.55
MRPS28-208ENST00000521605 LONP2Q86WA8 852 aa11.6□□□□□ -0.55
MRPS28-208ENST00000521605 GPD1LQ8N335 351 aa11.6□□□□□ -0.55
MRPS28-208ENST00000521605 LMO3Q8TAP4 145 aa11.6□□□□□ -0.55
MRPS28-208ENST00000521605 DEPTORQ8TB45 409 aa11.6□□□□□ -0.55
MRPS28-208ENST00000521605 ASAP3Q8TDY4 903 aa11.6□□□□□ -0.55
MRPS28-208ENST00000521605 PARD3BQ8TEW8 1205 aa11.6□□□□□ -0.55
MRPS28-208ENST00000521605 DNASE1L2Q92874 299 aa11.6□□□□□ -0.55
MRPS28-208ENST00000521605 JAKMIP2Q96AA8 810 aa11.6□□□□□ -0.55
MRPS28-208ENST00000521605 CALR3Q96L12 384 aaKnown RBP11.6□□□□□ -0.55
MRPS28-208ENST00000521605 DESI2Q9BSY9 194 aa11.6□□□□□ -0.55
MRPS28-208ENST00000521605 EIF2AQ9BY44 585 aaKnown RBP11.6□□□□□ -0.55
MRPS28-208ENST00000521605 CCDC113Q9H0I3 377 aa11.6□□□□□ -0.55
MRPS28-208ENST00000521605 MINDY3Q9H8M7 445 aa11.6□□□□□ -0.55
MRPS28-208ENST00000521605 TMEM8AQ9HCN3 771 aa11.6□□□□□ -0.55
MRPS28-208ENST00000521605 POLD4Q9HCU8 107 aa11.6□□□□□ -0.55
MRPS28-208ENST00000521605 UBN1Q9NPG3 1134 aa11.6□□□□□ -0.55
MRPS28-208ENST00000521605 DNMT3BQ9UBC3 853 aaKnown RBP11.6□□□□□ -0.55
MRPS28-208ENST00000521605 ADAM28Q9UKQ2 775 aa11.6□□□□□ -0.55
MRPS28-208ENST00000521605 INTUQ9ULD6 942 aa11.6□□□□□ -0.55
MRPS28-208ENST00000521605 PIAS3Q9Y6X2 628 aa11.6□□□□□ -0.55
MRPS28-208ENST00000521605 NBEAQ8NFP9 2946 aa11.6□□□□□ -0.55
MRPS28-208ENST00000521605 GCN1Q92616 2671 aaKnown RBP11.59□□□□□ -0.55
MRPS28-208ENST00000521605 TDRD15B5MCY1 1934 aaKnown RBP11.59□□□□□ -0.55
MRPS28-208ENST00000521605 A0A0B4J269 797 aa11.59□□□□□ -0.55
MRPS28-208ENST00000521605 ANO9A1A5B4 782 aa11.59□□□□□ -0.55
MRPS28-208ENST00000521605 ZNF233A6NK53 670 aa11.59□□□□□ -0.55
MRPS28-208ENST00000521605 RIOK3O14730 519 aaKnown RBP11.59□□□□□ -0.55
MRPS28-208ENST00000521605 GIPC1O14908 333 aa11.59□□□□□ -0.55
MRPS28-208ENST00000521605 ADAM12O43184 909 aa11.59□□□□□ -0.55
MRPS28-208ENST00000521605 TADA2AO75478 443 aa11.59□□□□□ -0.55
MRPS28-208ENST00000521605 TOP3BO95985 862 aaKnown RBP11.59□□□□□ -0.55
MRPS28-208ENST00000521605 SLC9A1P19634 815 aa11.59□□□□□ -0.55
MRPS28-208ENST00000521605 CASQ1P31415 396 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms