RNA–Protein interactions for RNA: ENST00000520991.3

CLN8-205, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 5 BASIC

Gene CLN8, Length 1,305 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-205ENST00000520991 PSMD2Q13200 908 aa16.91■□□□□ 0.3
CLN8-205ENST00000520991 BIRC3Q13489 604 aa16.91■□□□□ 0.3
CLN8-205ENST00000520991 ZNF268Q14587 947 aaPredicted RBP16.91■□□□□ 0.3
CLN8-205ENST00000520991 MDH1BQ5I0G3 518 aa16.91■□□□□ 0.3
CLN8-205ENST00000520991 DGKKQ5KSL6 1271 aa16.91■□□□□ 0.3
CLN8-205ENST00000520991 KIAA2013Q8IYS2 634 aa16.91■□□□□ 0.3
CLN8-205ENST00000520991 SPEM1Q8N4L4 309 aa16.91■□□□□ 0.3
CLN8-205ENST00000520991 OR6B3Q8NGW1 331 aa16.91■□□□□ 0.3
CLN8-205ENST00000520991 MYCBPAPQ8TBZ2 947 aa16.91■□□□□ 0.3
CLN8-205ENST00000520991 NELL1Q92832 810 aa16.91■□□□□ 0.3
CLN8-205ENST00000520991 SYAP1Q96A49 352 aaPredicted RBP16.91■□□□□ 0.3
CLN8-205ENST00000520991 NXF1Q9UBU9 619 aaKnown RBP16.91■□□□□ 0.3
CLN8-205ENST00000520991 SMG5Q9UPR3 1016 aaKnown RBP16.91■□□□□ 0.3
CLN8-205ENST00000520991 ZNF292O60281 2723 aa16.91■□□□□ 0.3
CLN8-205ENST00000520991 OBSL1O75147 1896 aa16.9■□□□□ 0.3
CLN8-205ENST00000520991 KLRC4O43908 158 aa16.9■□□□□ 0.3
CLN8-205ENST00000520991 LILRB5O75023 590 aa16.9■□□□□ 0.3
CLN8-205ENST00000520991 USP17L7P0C7H9 530 aa16.9■□□□□ 0.3
CLN8-205ENST00000520991 ATICP31939 592 aa16.9■□□□□ 0.3
CLN8-205ENST00000520991 CASP4P49662 377 aa16.9■□□□□ 0.3
CLN8-205ENST00000520991 MYL6P60660 151 aa16.9■□□□□ 0.3
CLN8-205ENST00000520991 STK4Q13043 487 aa16.9■□□□□ 0.3
CLN8-205ENST00000520991 RUNX3Q13761 415 aa16.9■□□□□ 0.3
CLN8-205ENST00000520991 GAS6Q14393 721 aa16.9■□□□□ 0.3
CLN8-205ENST00000520991 KMT5BQ4FZB7 885 aa16.9■□□□□ 0.3
CLN8-205ENST00000520991 TRIM68Q6AZZ1 485 aa16.9■□□□□ 0.3
CLN8-205ENST00000520991 Q6ZS52 159 aa16.9■□□□□ 0.3
CLN8-205ENST00000520991 KIAA0895Q8NCT3 520 aa16.9■□□□□ 0.3
CLN8-205ENST00000520991 ZNF516Q92618 1163 aa16.9■□□□□ 0.3
CLN8-205ENST00000520991 SECISBP2LQ93073 1101 aaKnown RBP16.9■□□□□ 0.3
CLN8-205ENST00000520991 PCED1BQ96HM7 432 aa16.9■□□□□ 0.3
CLN8-205ENST00000520991 SPATA17Q96L03 361 aa16.9■□□□□ 0.3
CLN8-205ENST00000520991 FAM83CQ9BQN1 747 aa16.9■□□□□ 0.3
CLN8-205ENST00000520991 EPC1Q9H2F5 836 aa16.9■□□□□ 0.3
CLN8-205ENST00000520991 EBF3Q9H4W6 596 aa16.9■□□□□ 0.3
CLN8-205ENST00000520991 ZNF638Q14966 1978 aaKnown RBP16.9■□□□□ 0.3
CLN8-205ENST00000520991 EP300Q09472 2414 aaPredicted RBP16.89■□□□□ 0.29
CLN8-205ENST00000520991 KIF26AQ9ULI4 1882 aaPredicted RBP16.89■□□□□ 0.29
CLN8-205ENST00000520991 DMXL1Q9Y485 3027 aa16.89■□□□□ 0.29
CLN8-205ENST00000520991 TRIM66O15016 1216 aa16.89■□□□□ 0.29
CLN8-205ENST00000520991 MYL1P05976 194 aa16.89■□□□□ 0.29
CLN8-205ENST00000520991 TDGF1P13385 188 aa16.89■□□□□ 0.29
CLN8-205ENST00000520991 ID4P47928 161 aa16.89■□□□□ 0.29
CLN8-205ENST00000520991 AP3M2P53677 418 aa16.89■□□□□ 0.29
CLN8-205ENST00000520991 FAM160A1Q05DH4 1040 aa16.89■□□□□ 0.29
CLN8-205ENST00000520991 KCNB1Q14721 858 aa16.89■□□□□ 0.29
CLN8-205ENST00000520991 MTF1Q14872 753 aa16.89■□□□□ 0.29
CLN8-205ENST00000520991 PDGFRLQ15198 375 aa16.89■□□□□ 0.29
CLN8-205ENST00000520991 DENND5BQ6ZUT9 1274 aa16.89■□□□□ 0.29
CLN8-205ENST00000520991 DCLK2Q8N568 766 aa16.89■□□□□ 0.29
CLN8-205ENST00000520991 CEP295NLQ96MC4 621 aa16.89■□□□□ 0.29
CLN8-205ENST00000520991 GZF1Q9H116 711 aaPredicted RBP16.89■□□□□ 0.29
CLN8-205ENST00000520991 HPS4Q9NQG7 708 aa16.89■□□□□ 0.29
CLN8-205ENST00000520991 EHD2Q9NZN4 543 aa16.89■□□□□ 0.29
CLN8-205ENST00000520991 GTF3C3Q9Y5Q9 886 aa16.89■□□□□ 0.29
CLN8-205ENST00000520991 A8MXQ7 604 aa16.88■□□□□ 0.29
CLN8-205ENST00000520991 STAU1O95793 577 aaKnown RBP16.88■□□□□ 0.29
CLN8-205ENST00000520991 FAM163BP0C2L3 166 aa16.88■□□□□ 0.29
CLN8-205ENST00000520991 ARSAP15289 507 aa16.88■□□□□ 0.29
CLN8-205ENST00000520991 PTPN1P18031 435 aaKnown RBP16.88■□□□□ 0.29
CLN8-205ENST00000520991 SYKP43405 635 aa16.88■□□□□ 0.29
CLN8-205ENST00000520991 PDE6CP51160 858 aa16.88■□□□□ 0.29
CLN8-205ENST00000520991 AMPD2Q01433 879 aa16.88■□□□□ 0.29
CLN8-205ENST00000520991 GRSF1Q12849 480 aaKnown RBP eCLIP16.88■□□□□ 0.29
CLN8-205ENST00000520991 CCINQ13939 588 aa16.88■□□□□ 0.29
CLN8-205ENST00000520991 ZNF699Q32M78 642 aa16.88■□□□□ 0.29
CLN8-205ENST00000520991 WDR44Q5JSH3 913 aa16.88■□□□□ 0.29
CLN8-205ENST00000520991 TDRD10Q5VZ19 366 aaKnown RBP16.88■□□□□ 0.29
CLN8-205ENST00000520991 SYNPOQ8N3V7 929 aa16.88■□□□□ 0.29
CLN8-205ENST00000520991 ARL14EPQ8N8R7 260 aaPredicted RBP16.88■□□□□ 0.29
CLN8-205ENST00000520991 RIN3Q8TB24 985 aa16.88■□□□□ 0.29
CLN8-205ENST00000520991 PARD3BQ8TEW8 1205 aa16.88■□□□□ 0.29
CLN8-205ENST00000520991 CCDC47Q96A33 483 aaKnown RBP16.88■□□□□ 0.29
CLN8-205ENST00000520991 CHAMP1Q96JM3 812 aa16.88■□□□□ 0.29
CLN8-205ENST00000520991 SLC22A12Q96S37 553 aa16.88■□□□□ 0.29
CLN8-205ENST00000520991 CYP2S1Q96SQ9 504 aa16.88■□□□□ 0.29
CLN8-205ENST00000520991 ELOVL4Q9GZR5 314 aa16.88■□□□□ 0.29
CLN8-205ENST00000520991 XYLT2Q9H1B5 865 aa16.88■□□□□ 0.29
CLN8-205ENST00000520991 DPEP3Q9H4B8 488 aa16.88■□□□□ 0.29
CLN8-205ENST00000520991 RAB23Q9ULC3 237 aa16.88■□□□□ 0.29
CLN8-205ENST00000520991 HPSEQ9Y251 543 aa16.88■□□□□ 0.29
CLN8-205ENST00000520991 ATP6V1DQ9Y5K8 247 aa16.88■□□□□ 0.29
CLN8-205ENST00000520991 SPTBN4Q9H254 2564 aa16.88■□□□□ 0.29
CLN8-205ENST00000520991 C2orf78A6NCI8 922 aa16.87■□□□□ 0.29
CLN8-205ENST00000520991 LRRIQ3A6PVS8 624 aaPredicted RBP16.87■□□□□ 0.29
CLN8-205ENST00000520991 F8VP50 259 aa16.87■□□□□ 0.29
CLN8-205ENST00000520991 NR3C1P04150 777 aa16.87■□□□□ 0.29
CLN8-205ENST00000520991 RPN1P04843 607 aaKnown RBP16.87■□□□□ 0.29
CLN8-205ENST00000520991 IFNAR2P48551 515 aa16.87■□□□□ 0.29
CLN8-205ENST00000520991 NCOA4Q13772 614 aa16.87■□□□□ 0.29
CLN8-205ENST00000520991 ZNF77Q15935 545 aa16.87■□□□□ 0.29
CLN8-205ENST00000520991 ZNF667Q5HYK9 610 aa16.87■□□□□ 0.29
CLN8-205ENST00000520991 SLC9A9Q8IVB4 645 aa16.87■□□□□ 0.29
CLN8-205ENST00000520991 CPA6Q8N4T0 437 aa16.87■□□□□ 0.29
CLN8-205ENST00000520991 B3GALNT2Q8NCR0 500 aa16.87■□□□□ 0.29
CLN8-205ENST00000520991 PLEKHO2Q8TD55 490 aa16.87■□□□□ 0.29
CLN8-205ENST00000520991 KCTD10Q9H3F6 313 aa16.87■□□□□ 0.29
CLN8-205ENST00000520991 DUS2Q9NX74 493 aaKnown RBP16.87■□□□□ 0.29
CLN8-205ENST00000520991 TRPM5Q9NZQ8 1165 aa16.87■□□□□ 0.29
CLN8-205ENST00000520991 ZDHHC9Q9Y397 364 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms