RNA–Protein interactions for RNA: ENST00000519481.5

PVT1-208, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 542 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-208ENST00000519481 HPS3Q969F9 1004 aa11.63□□□□□ -0.55
PVT1-208ENST00000519481 FAM84AQ96KN4 292 aa11.63□□□□□ -0.55
PVT1-208ENST00000519481 SPATA17Q96L03 361 aa11.63□□□□□ -0.55
PVT1-208ENST00000519481 PKMYT1Q99640 499 aa11.63□□□□□ -0.55
PVT1-208ENST00000519481 BACH2Q9BYV9 841 aa11.63□□□□□ -0.55
PVT1-208ENST00000519481 HPS4Q9NQG7 708 aa11.63□□□□□ -0.55
PVT1-208ENST00000519481 DUS2Q9NX74 493 aaKnown RBP11.63□□□□□ -0.55
PVT1-208ENST00000519481 FAM13BQ9NYF5 915 aa11.63□□□□□ -0.55
PVT1-208ENST00000519481 TRPM5Q9NZQ8 1165 aa11.63□□□□□ -0.55
PVT1-208ENST00000519481 CCDC163A0A0D9SF12 145 aa11.62□□□□□ -0.55
PVT1-208ENST00000519481 MED19A0JLT2 244 aaPredicted RBP11.62□□□□□ -0.55
PVT1-208ENST00000519481 TRIM66O15016 1216 aa11.62□□□□□ -0.55
PVT1-208ENST00000519481 CLSTN1O94985 981 aa11.62□□□□□ -0.55
PVT1-208ENST00000519481 PDGFRBP09619 1106 aa11.62□□□□□ -0.55
PVT1-208ENST00000519481 FAM163BP0C2L3 166 aa11.62□□□□□ -0.55
PVT1-208ENST00000519481 ARSAP15289 507 aa11.62□□□□□ -0.55
PVT1-208ENST00000519481 PFKLP17858 780 aa11.62□□□□□ -0.55
PVT1-208ENST00000519481 HDCP19113 662 aa11.62□□□□□ -0.55
PVT1-208ENST00000519481 WARSP23381 471 aaKnown RBP11.62□□□□□ -0.55
PVT1-208ENST00000519481 BDNFP23560 247 aa11.62□□□□□ -0.55
PVT1-208ENST00000519481 GNL1P36915 607 aaPredicted RBP11.62□□□□□ -0.55
PVT1-208ENST00000519481 CYP2J2P51589 502 aa11.62□□□□□ -0.55
PVT1-208ENST00000519481 ATXN1P54253 815 aaKnown RBP11.62□□□□□ -0.55
PVT1-208ENST00000519481 PSMC1P62191 440 aaKnown RBP11.62□□□□□ -0.55
PVT1-208ENST00000519481 TNNC1P63316 161 aa11.62□□□□□ -0.55
PVT1-208ENST00000519481 TRPC3Q13507 836 aa11.62□□□□□ -0.55
PVT1-208ENST00000519481 E2F4Q16254 413 aa11.62□□□□□ -0.55
PVT1-208ENST00000519481 SNRNP35Q16560 246 aaKnown RBP11.62□□□□□ -0.55
PVT1-208ENST00000519481 WDR44Q5JSH3 913 aa11.62□□□□□ -0.55
PVT1-208ENST00000519481 FOXD4L5Q5VV16 416 aaPredicted RBP11.62□□□□□ -0.55
PVT1-208ENST00000519481 FSTL4Q6MZW2 842 aa11.62□□□□□ -0.55
PVT1-208ENST00000519481 CNNM4Q6P4Q7 775 aa11.62□□□□□ -0.55
PVT1-208ENST00000519481 UNC13DQ70J99 1090 aa11.62□□□□□ -0.55
PVT1-208ENST00000519481 TRAPPC11Q7Z392 1133 aa11.62□□□□□ -0.55
PVT1-208ENST00000519481 HSCBQ8IWL3 235 aa11.62□□□□□ -0.55
PVT1-208ENST00000519481 XXYLT1Q8NBI6 393 aa11.62□□□□□ -0.55
PVT1-208ENST00000519481 GLIS3Q8NEA6 775 aa11.62□□□□□ -0.55
PVT1-208ENST00000519481 NETO1Q8TDF5 533 aa11.62□□□□□ -0.55
PVT1-208ENST00000519481 OSCP1Q8WVF1 389 aa11.62□□□□□ -0.55
PVT1-208ENST00000519481 FOXD4L4Q8WXT5 416 aaPredicted RBP11.62□□□□□ -0.55
PVT1-208ENST00000519481 MYLPFQ96A32 169 aa11.62□□□□□ -0.55
PVT1-208ENST00000519481 P2RY13Q9BPV8 354 aa11.62□□□□□ -0.55
PVT1-208ENST00000519481 C7orf25Q9BPX7 421 aa11.62□□□□□ -0.55
PVT1-208ENST00000519481 PARD6AQ9NPB6 346 aa11.62□□□□□ -0.55
PVT1-208ENST00000519481 AGPAT3Q9NRZ7 376 aa11.62□□□□□ -0.55
PVT1-208ENST00000519481 CGNQ9P2M7 1197 aaKnown RBP11.62□□□□□ -0.55
PVT1-208ENST00000519481 CLIC2O15247 247 aa11.61□□□□□ -0.55
PVT1-208ENST00000519481 POLR2DO15514 142 aaKnown RBP11.61□□□□□ -0.55
PVT1-208ENST00000519481 HCRTO43612 131 aa11.61□□□□□ -0.55
PVT1-208ENST00000519481 PHACTR2O75167 634 aa11.61□□□□□ -0.55
PVT1-208ENST00000519481 ATP2C2O75185 946 aa11.61□□□□□ -0.55
PVT1-208ENST00000519481 TADA3O75528 432 aa11.61□□□□□ -0.55
PVT1-208ENST00000519481 NFATC1O95644 943 aa11.61□□□□□ -0.55
PVT1-208ENST00000519481 CCDC192P0DO97 292 aa11.61□□□□□ -0.55
PVT1-208ENST00000519481 TGM1P22735 817 aa11.61□□□□□ -0.55
PVT1-208ENST00000519481 LMO2P25791 158 aa11.61□□□□□ -0.55
PVT1-208ENST00000519481 GJA4P35212 333 aa11.61□□□□□ -0.55
PVT1-208ENST00000519481 ME1P48163 572 aa11.61□□□□□ -0.55
PVT1-208ENST00000519481 PPP3CCP48454 512 aa11.61□□□□□ -0.55
PVT1-208ENST00000519481 GALK1P51570 392 aa11.61□□□□□ -0.55
PVT1-208ENST00000519481 CYP24A1Q07973 514 aa11.61□□□□□ -0.55
PVT1-208ENST00000519481 USP4Q13107 963 aa11.61□□□□□ -0.55
PVT1-208ENST00000519481 SRSF5Q13243 272 aaKnown RBP11.61□□□□□ -0.55
PVT1-208ENST00000519481 PSMD6Q15008 389 aa11.61□□□□□ -0.55
PVT1-208ENST00000519481 ZNF77Q15935 545 aa11.61□□□□□ -0.55
PVT1-208ENST00000519481 CSRP2Q16527 193 aa11.61□□□□□ -0.55
PVT1-208ENST00000519481 DENND5BQ6ZUT9 1274 aa11.61□□□□□ -0.55
PVT1-208ENST00000519481 EPM2AIP1Q7L775 607 aaPredicted RBP11.61□□□□□ -0.55
PVT1-208ENST00000519481 CACNA2D4Q7Z3S7 1137 aa11.61□□□□□ -0.55
PVT1-208ENST00000519481 LIMS2Q7Z4I7 341 aa11.61□□□□□ -0.55
PVT1-208ENST00000519481 NELFCDQ8IXH7 590 aa11.61□□□□□ -0.55
PVT1-208ENST00000519481 CEP57L1Q8IYX8 460 aa11.61□□□□□ -0.55
PVT1-208ENST00000519481 CAMKK1Q8N5S9 505 aa11.61□□□□□ -0.55
PVT1-208ENST00000519481 ARL14EPQ8N8R7 260 aaPredicted RBP11.61□□□□□ -0.55
PVT1-208ENST00000519481 OR6B3Q8NGW1 331 aa11.61□□□□□ -0.55
PVT1-208ENST00000519481 GOLGA5Q8TBA6 731 aa11.61□□□□□ -0.55
PVT1-208ENST00000519481 MYCBPAPQ8TBZ2 947 aa11.61□□□□□ -0.55
PVT1-208ENST00000519481 SH3RF2Q8TEC5 729 aa11.61□□□□□ -0.55
PVT1-208ENST00000519481 KBTBD7Q8WVZ9 684 aa11.61□□□□□ -0.55
PVT1-208ENST00000519481 CD101Q93033 1021 aa11.61□□□□□ -0.55
PVT1-208ENST00000519481 ACDQ96AP0 544 aa11.61□□□□□ -0.55
PVT1-208ENST00000519481 CCDC127Q96BQ5 260 aa11.61□□□□□ -0.55
PVT1-208ENST00000519481 CYP2S1Q96SQ9 504 aa11.61□□□□□ -0.55
PVT1-208ENST00000519481 CGRRF1Q99675 332 aa11.61□□□□□ -0.55
PVT1-208ENST00000519481 ECT2Q9H8V3 914 aa11.61□□□□□ -0.55
PVT1-208ENST00000519481 SEMA4GQ9NTN9 838 aa11.61□□□□□ -0.55
PVT1-208ENST00000519481 ARHGAP26Q9UNA1 814 aa11.61□□□□□ -0.55
PVT1-208ENST00000519481 DCHS1Q96JQ0 3298 aa11.61□□□□□ -0.55
PVT1-208ENST00000519481 PTPRJQ12913 1337 aa11.6□□□□□ -0.55
PVT1-208ENST00000519481 PVALEFA0A1B0GWK0 134 aa11.6□□□□□ -0.55
PVT1-208ENST00000519481 TGFB1I1O43294 461 aa11.6□□□□□ -0.55
PVT1-208ENST00000519481 EXOC3O60645 756 aa11.6□□□□□ -0.55
PVT1-208ENST00000519481 RNF40O75150 1001 aa11.6□□□□□ -0.55
PVT1-208ENST00000519481 TACC1O75410 805 aa11.6□□□□□ -0.55
PVT1-208ENST00000519481 RPP40O75818 363 aaKnown RBP11.6□□□□□ -0.55
PVT1-208ENST00000519481 EGFP01133 1207 aa11.6□□□□□ -0.55
PVT1-208ENST00000519481 TCF3P15923 654 aa11.6□□□□□ -0.55
PVT1-208ENST00000519481 ATICP31939 592 aa11.6□□□□□ -0.55
PVT1-208ENST00000519481 HOXD13P35453 343 aa11.6□□□□□ -0.55
PVT1-208ENST00000519481 PSMD2Q13200 908 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms