RNA–Protein interactions for RNA: ENST00000518371.2

MRPS28-203, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 3

Gene MRPS28, Length 783 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-203ENST00000518371 DPP7Q9UHL4 492 aa6.59□□□□□ -1.35
MRPS28-203ENST00000518371 DERAQ9Y315 318 aa6.59□□□□□ -1.35
MRPS28-203ENST00000518371 HCFC2Q9Y5Z7 792 aa6.59□□□□□ -1.35
MRPS28-203ENST00000518371 RALGAPA2Q2PPJ7 1873 aa6.59□□□□□ -1.35
MRPS28-203ENST00000518371 H7C4K7 107 aa6.58□□□□□ -1.36
MRPS28-203ENST00000518371 PDXKO00764 312 aa6.58□□□□□ -1.36
MRPS28-203ENST00000518371 SYN3O14994 580 aa6.58□□□□□ -1.36
MRPS28-203ENST00000518371 TGFB1I1O43294 461 aa6.58□□□□□ -1.36
MRPS28-203ENST00000518371 MBTPS2O43462 519 aa6.58□□□□□ -1.36
MRPS28-203ENST00000518371 CALUO43852 315 aaPredicted RBP6.58□□□□□ -1.36
MRPS28-203ENST00000518371 RHOBTB3O94955 611 aa6.58□□□□□ -1.36
MRPS28-203ENST00000518371 GLP2RO95838 553 aa6.58□□□□□ -1.36
MRPS28-203ENST00000518371 GLUD1P00367 558 aa6.58□□□□□ -1.36
MRPS28-203ENST00000518371 TNNC2P02585 160 aa6.58□□□□□ -1.36
MRPS28-203ENST00000518371 KRT19P08727 400 aa6.58□□□□□ -1.36
MRPS28-203ENST00000518371 TMEM191BP0C7N4 346 aa6.58□□□□□ -1.36
MRPS28-203ENST00000518371 SPATA31D3P0C874 917 aa6.58□□□□□ -1.36
MRPS28-203ENST00000518371 IL9P15248 144 aa6.58□□□□□ -1.36
MRPS28-203ENST00000518371 TNNI1P19237 187 aa6.58□□□□□ -1.36
MRPS28-203ENST00000518371 PAX3P23760 479 aa6.58□□□□□ -1.36
MRPS28-203ENST00000518371 TKTP29401 623 aaKnown RBP6.58□□□□□ -1.36
MRPS28-203ENST00000518371 OR1D2P34982 312 aa6.58□□□□□ -1.36
MRPS28-203ENST00000518371 GP2P55259 537 aaKnown RBP6.58□□□□□ -1.36
MRPS28-203ENST00000518371 ARPP19P56211 112 aa6.58□□□□□ -1.36
MRPS28-203ENST00000518371 SMAD4Q13485 552 aaKnown RBP6.58□□□□□ -1.36
MRPS28-203ENST00000518371 SNW1Q13573 536 aaKnown RBP6.58□□□□□ -1.36
MRPS28-203ENST00000518371 KCNC3Q14003 757 aa6.58□□□□□ -1.36
MRPS28-203ENST00000518371 KCNB1Q14721 858 aa6.58□□□□□ -1.36
MRPS28-203ENST00000518371 SETDB1Q15047 1291 aa6.58□□□□□ -1.36
MRPS28-203ENST00000518371 BMT2Q1RMZ1 405 aa6.58□□□□□ -1.36
MRPS28-203ENST00000518371 ATAT1Q5SQI0 421 aa6.58□□□□□ -1.36
MRPS28-203ENST00000518371 RARS2Q5T160 578 aaKnown RBP6.58□□□□□ -1.36
MRPS28-203ENST00000518371 C9orf57Q5W0N0 161 aa6.58□□□□□ -1.36
MRPS28-203ENST00000518371 SYCE2Q6PIF2 218 aa6.58□□□□□ -1.36
MRPS28-203ENST00000518371 PRR23CQ6ZRP0 262 aa6.58□□□□□ -1.36
MRPS28-203ENST00000518371 SPATA31D4Q6ZUB0 917 aa6.58□□□□□ -1.36
MRPS28-203ENST00000518371 ANKS3Q6ZW76 656 aa6.58□□□□□ -1.36
MRPS28-203ENST00000518371 USP37Q86T82 979 aa6.58□□□□□ -1.36
MRPS28-203ENST00000518371 NT5DC4Q86YG4 428 aa6.58□□□□□ -1.36
MRPS28-203ENST00000518371 CBWD2Q8IUF1 395 aa6.58□□□□□ -1.36
MRPS28-203ENST00000518371 TMEM130Q8N3G9 435 aa6.58□□□□□ -1.36
MRPS28-203ENST00000518371 CSGALNACT2Q8N6G5 542 aa6.58□□□□□ -1.36
MRPS28-203ENST00000518371 C12orf76Q8N812 135 aaPredicted RBP6.58□□□□□ -1.36
MRPS28-203ENST00000518371 XXYLT1Q8NBI6 393 aa6.58□□□□□ -1.36
MRPS28-203ENST00000518371 KIAA0895Q8NCT3 520 aa6.58□□□□□ -1.36
MRPS28-203ENST00000518371 C3orf58Q8NDZ4 430 aa6.58□□□□□ -1.36
MRPS28-203ENST00000518371 APPL2Q8NEU8 664 aa6.58□□□□□ -1.36
MRPS28-203ENST00000518371 LNX1Q8TBB1 728 aaPredicted RBP6.58□□□□□ -1.36
MRPS28-203ENST00000518371 SMARCE1Q969G3 411 aa6.58□□□□□ -1.36
MRPS28-203ENST00000518371 CCDC127Q96BQ5 260 aa6.58□□□□□ -1.36
MRPS28-203ENST00000518371 ANKRD36BP1Q96IX9 119 aa6.58□□□□□ -1.36
MRPS28-203ENST00000518371 MSLNLQ96KJ4 702 aa6.58□□□□□ -1.36
MRPS28-203ENST00000518371 FBXL18Q96ME1 805 aa6.58□□□□□ -1.36
MRPS28-203ENST00000518371 GSDMAQ96QA5 445 aa6.58□□□□□ -1.36
MRPS28-203ENST00000518371 FNBP1Q96RU3 617 aa6.58□□□□□ -1.36
MRPS28-203ENST00000518371 UHRF1Q96T88 793 aaPredicted RBP6.58□□□□□ -1.36
MRPS28-203ENST00000518371 CLSTN3Q9BQT9 956 aa6.58□□□□□ -1.36
MRPS28-203ENST00000518371 GTPBP4Q9BZE4 634 aaKnown RBP6.58□□□□□ -1.36
MRPS28-203ENST00000518371 PDE11AQ9HCR9 933 aa6.58□□□□□ -1.36
MRPS28-203ENST00000518371 DZANK1Q9NVP4 752 aa6.58□□□□□ -1.36
MRPS28-203ENST00000518371 AGAP1Q9UPQ3 857 aa6.58□□□□□ -1.36
MRPS28-203ENST00000518371 MAPK8IP1Q9UQF2 711 aa6.58□□□□□ -1.36
MRPS28-203ENST00000518371 C2CD2Q9Y426 696 aa6.58□□□□□ -1.36
MRPS28-203ENST00000518371 PCDHA5Q9Y5H7 936 aa6.58□□□□□ -1.36
MRPS28-203ENST00000518371 NLRC5Q86WI3 1866 aa6.58□□□□□ -1.36
MRPS28-203ENST00000518371 MYH11P35749 1972 aa6.57□□□□□ -1.36
MRPS28-203ENST00000518371 ARHGEF37A1IGU5 675 aa6.57□□□□□ -1.36
MRPS28-203ENST00000518371 PIRO00625 290 aa6.57□□□□□ -1.36
MRPS28-203ENST00000518371 PPEF2O14830 753 aa6.57□□□□□ -1.36
MRPS28-203ENST00000518371 TGM5O43548 720 aa6.57□□□□□ -1.36
MRPS28-203ENST00000518371 ITGB3P05106 788 aa6.57□□□□□ -1.36
MRPS28-203ENST00000518371 DLATP10515 647 aaKnown RBP6.57□□□□□ -1.36
MRPS28-203ENST00000518371 RPL13P26373 211 aaKnown RBP6.57□□□□□ -1.36
MRPS28-203ENST00000518371 ELF1P32519 619 aa6.57□□□□□ -1.36
MRPS28-203ENST00000518371 MTHFRP42898 656 aa6.57□□□□□ -1.36
MRPS28-203ENST00000518371 TAF6P49848 677 aa6.57□□□□□ -1.36
MRPS28-203ENST00000518371 CLCN4P51793 760 aa6.57□□□□□ -1.36
MRPS28-203ENST00000518371 LILRA4P59901 499 aa6.57□□□□□ -1.36
MRPS28-203ENST00000518371 UBE2HP62256 183 aa6.57□□□□□ -1.36
MRPS28-203ENST00000518371 RBP5P82980 135 aa6.57□□□□□ -1.36
MRPS28-203ENST00000518371 ITIH3Q06033 890 aa6.57□□□□□ -1.36
MRPS28-203ENST00000518371 SMAD2Q15796 467 aaKnown RBP6.57□□□□□ -1.36
MRPS28-203ENST00000518371 SNRNP35Q16560 246 aaKnown RBP6.57□□□□□ -1.36
MRPS28-203ENST00000518371 DUOXA2Q1HG44 320 aa6.57□□□□□ -1.36
MRPS28-203ENST00000518371 CTXN3Q4LDR2 81 aa6.57□□□□□ -1.36
MRPS28-203ENST00000518371 CEP135Q66GS9 1140 aa6.57□□□□□ -1.36
MRPS28-203ENST00000518371 LMBRD2Q68DH5 695 aaPredicted RBP6.57□□□□□ -1.36
MRPS28-203ENST00000518371 TMC5Q6UXY8 1006 aa6.57□□□□□ -1.36
MRPS28-203ENST00000518371 ATCAYQ86WG3 371 aa6.57□□□□□ -1.36
MRPS28-203ENST00000518371 METTL23Q86XA0 190 aa6.57□□□□□ -1.36
MRPS28-203ENST00000518371 C12orf56Q8IXR9 622 aa6.57□□□□□ -1.36
MRPS28-203ENST00000518371 EFCAB13Q8IY85 973 aa6.57□□□□□ -1.36
MRPS28-203ENST00000518371 ELOA2Q8IYF1 753 aaPredicted RBP6.57□□□□□ -1.36
MRPS28-203ENST00000518371 GUF1Q8N442 669 aaKnown RBP6.57□□□□□ -1.36
MRPS28-203ENST00000518371 SMRP1Q8NCR6 262 aa6.57□□□□□ -1.36
MRPS28-203ENST00000518371 KREMEN2Q8NCW0 462 aa6.57□□□□□ -1.36
MRPS28-203ENST00000518371 HDAC7Q8WUI4 952 aa6.57□□□□□ -1.36
MRPS28-203ENST00000518371 ERCC4Q92889 916 aaPredicted RBP6.57□□□□□ -1.36
MRPS28-203ENST00000518371 SENP8Q96LD8 212 aa6.57□□□□□ -1.36
MRPS28-203ENST00000518371 RIPOR3Q96MK2 946 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms