RNA–Protein interactions for RNA: ENST00000517921.1

PABPC1-203, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 885 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-203ENST00000517921 HESX1Q9UBX0 185 aa11.19□□□□□ -0.62
PABPC1-203ENST00000517921 TJP2Q9UDY2 1190 aa11.19□□□□□ -0.62
PABPC1-203ENST00000517921 CNOT8Q9UFF9 292 aaKnown RBP11.19□□□□□ -0.62
PABPC1-203ENST00000517921 COL4A4P53420 1690 aaPredicted RBP11.19□□□□□ -0.62
PABPC1-203ENST00000517921 TRANK1O15050 2925 aa11.19□□□□□ -0.62
PABPC1-203ENST00000517921 TCRBV5S1A1TA0A578 114 aa11.18□□□□□ -0.62
PABPC1-203ENST00000517921 GRID2IPA4D2P6 1211 aa11.18□□□□□ -0.62
PABPC1-203ENST00000517921 CLDN5O00501 218 aa11.18□□□□□ -0.62
PABPC1-203ENST00000517921 BUB1O43683 1085 aa11.18□□□□□ -0.62
PABPC1-203ENST00000517921 TBC1D4O60343 1298 aa11.18□□□□□ -0.62
PABPC1-203ENST00000517921 MTA2O94776 668 aa11.18□□□□□ -0.62
PABPC1-203ENST00000517921 CALB1P05937 261 aa11.18□□□□□ -0.62
PABPC1-203ENST00000517921 ATP2A2P16615 1042 aaKnown RBP11.18□□□□□ -0.62
PABPC1-203ENST00000517921 RRM1P23921 792 aa11.18□□□□□ -0.62
PABPC1-203ENST00000517921 GSCP56915 257 aaPredicted RBP11.18□□□□□ -0.62
PABPC1-203ENST00000517921 GNG11P61952 73 aa11.18□□□□□ -0.62
PABPC1-203ENST00000517921 PDE4CQ08493 712 aa11.18□□□□□ -0.62
PABPC1-203ENST00000517921 BST2Q10589 180 aaKnown RBP11.18□□□□□ -0.62
PABPC1-203ENST00000517921 ZNF569Q5MCW4 686 aa11.18□□□□□ -0.62
PABPC1-203ENST00000517921 CYP4A22Q5TCH4 519 aa11.18□□□□□ -0.62
PABPC1-203ENST00000517921 ZNF280DQ6N043 979 aa11.18□□□□□ -0.62
PABPC1-203ENST00000517921 LRRTM3Q86VH5 581 aa11.18□□□□□ -0.62
PABPC1-203ENST00000517921 ERICH1Q86X53 443 aa11.18□□□□□ -0.62
PABPC1-203ENST00000517921 CEP57Q86XR8 500 aa11.18□□□□□ -0.62
PABPC1-203ENST00000517921 SLC35F6Q8N357 371 aa11.18□□□□□ -0.62
PABPC1-203ENST00000517921 SLC35G2Q8TBE7 412 aa11.18□□□□□ -0.62
PABPC1-203ENST00000517921 SLC35F5Q8WV83 523 aa11.18□□□□□ -0.62
PABPC1-203ENST00000517921 CLP1Q92989 425 aaKnown RBP11.18□□□□□ -0.62
PABPC1-203ENST00000517921 FAM161BQ96MY7 647 aa11.18□□□□□ -0.62
PABPC1-203ENST00000517921 NOX5Q96PH1 765 aa11.18□□□□□ -0.62
PABPC1-203ENST00000517921 HERC2P3Q9BVR0 1158 aa11.18□□□□□ -0.62
PABPC1-203ENST00000517921 NUP85Q9BW27 656 aa11.18□□□□□ -0.62
PABPC1-203ENST00000517921 ZCWPW1Q9H0M4 648 aa11.18□□□□□ -0.62
PABPC1-203ENST00000517921 OSGEPQ9NPF4 335 aa11.18□□□□□ -0.62
PABPC1-203ENST00000517921 KRT82Q9NSB4 513 aa11.18□□□□□ -0.62
PABPC1-203ENST00000517921 TMLHEQ9NVH6 421 aa11.18□□□□□ -0.62
PABPC1-203ENST00000517921 MTMR10Q9NXD2 777 aa11.18□□□□□ -0.62
PABPC1-203ENST00000517921 COG5Q9UP83 839 aa11.18□□□□□ -0.62
PABPC1-203ENST00000517921 INSL6Q9Y581 213 aa11.18□□□□□ -0.62
PABPC1-203ENST00000517921 PCDHGC5Q9Y5F6 944 aa11.18□□□□□ -0.62
PABPC1-203ENST00000517921 DOCK6Q96HP0 2047 aa11.18□□□□□ -0.62
PABPC1-203ENST00000517921 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.17□□□□□ -0.62
PABPC1-203ENST00000517921 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.17□□□□□ -0.62
PABPC1-203ENST00000517921 LCHNA4D1U4 455 aa11.17□□□□□ -0.62
PABPC1-203ENST00000517921 OR6C75A6NL08 312 aa11.17□□□□□ -0.62
PABPC1-203ENST00000517921 XPO1O14980 1071 aaKnown RBP11.17□□□□□ -0.62
PABPC1-203ENST00000517921 TUBB4AP04350 444 aa11.17□□□□□ -0.62
PABPC1-203ENST00000517921 ERBB2P04626 1255 aa11.17□□□□□ -0.62
PABPC1-203ENST00000517921 OR4Q2P0C623 313 aa11.17□□□□□ -0.62
PABPC1-203ENST00000517921 FAM200BP0CF97 657 aa11.17□□□□□ -0.62
PABPC1-203ENST00000517921 NPR3P17342 541 aa11.17□□□□□ -0.62
PABPC1-203ENST00000517921 PPM1AP35813 382 aa11.17□□□□□ -0.62
PABPC1-203ENST00000517921 NOP2P46087 812 aaKnown RBP11.17□□□□□ -0.62
PABPC1-203ENST00000517921 PLA2G4AP47712 749 aa11.17□□□□□ -0.62
PABPC1-203ENST00000517921 GABRB2P47870 512 aa11.17□□□□□ -0.62
PABPC1-203ENST00000517921 RPL34P49207 117 aaKnown RBP11.17□□□□□ -0.62
PABPC1-203ENST00000517921 RGS7P49802 495 aa11.17□□□□□ -0.62
PABPC1-203ENST00000517921 HADHBP55084 474 aaKnown RBP11.17□□□□□ -0.62
PABPC1-203ENST00000517921 SMAD3P84022 425 aaKnown RBP11.17□□□□□ -0.62
PABPC1-203ENST00000517921 MAPRE1Q15691 268 aaKnown RBP11.17□□□□□ -0.62
PABPC1-203ENST00000517921 USP41Q3LFD5 358 aa11.17□□□□□ -0.62
PABPC1-203ENST00000517921 CTXN3Q4LDR2 81 aa11.17□□□□□ -0.62
PABPC1-203ENST00000517921 LIN9Q5TKA1 542 aa11.17□□□□□ -0.62
PABPC1-203ENST00000517921 FAM109BQ6ICB4 259 aaPredicted RBP11.17□□□□□ -0.62
PABPC1-203ENST00000517921 PLEKHA7Q6IQ23 1121 aa11.17□□□□□ -0.62
PABPC1-203ENST00000517921 PMF1Q6P1K2 205 aa11.17□□□□□ -0.62
PABPC1-203ENST00000517921 SYT10Q6XYQ8 523 aa11.17□□□□□ -0.62
PABPC1-203ENST00000517921 CLEC20AQ6ZU45 233 aa11.17□□□□□ -0.62
PABPC1-203ENST00000517921 PHLDB2Q86SQ0 1253 aa11.17□□□□□ -0.62
PABPC1-203ENST00000517921 XYLT1Q86Y38 959 aa11.17□□□□□ -0.62
PABPC1-203ENST00000517921 RHOT2Q8IXI1 618 aa11.17□□□□□ -0.62
PABPC1-203ENST00000517921 FIBCD1Q8N539 461 aa11.17□□□□□ -0.62
PABPC1-203ENST00000517921 LRRC57Q8N9N7 239 aa11.17□□□□□ -0.62
PABPC1-203ENST00000517921 MSANTD4Q8NCY6 345 aa11.17□□□□□ -0.62
PABPC1-203ENST00000517921 TPCN2Q8NHX9 752 aa11.17□□□□□ -0.62
PABPC1-203ENST00000517921 ZNF564Q8TBZ8 553 aaPredicted RBP11.17□□□□□ -0.62
PABPC1-203ENST00000517921 IPO4Q8TEX9 1081 aaKnown RBP11.17□□□□□ -0.62
PABPC1-203ENST00000517921 STK32AQ8WU08 396 aa11.17□□□□□ -0.62
PABPC1-203ENST00000517921 SMARCD1Q96GM5 515 aa11.17□□□□□ -0.62
PABPC1-203ENST00000517921 TMEM169Q96HH4 297 aa11.17□□□□□ -0.62
PABPC1-203ENST00000517921 ALS2CR12Q96Q35 445 aa11.17□□□□□ -0.62
PABPC1-203ENST00000517921 RAD9AQ99638 391 aa11.17□□□□□ -0.62
PABPC1-203ENST00000517921 ZBED2Q9BTP6 218 aa11.17□□□□□ -0.62
PABPC1-203ENST00000517921 MED10Q9BTT4 135 aa11.17□□□□□ -0.62
PABPC1-203ENST00000517921 TTPALQ9BTX7 342 aa11.17□□□□□ -0.62
PABPC1-203ENST00000517921 DUSP16Q9BY84 665 aa11.17□□□□□ -0.62
PABPC1-203ENST00000517921 CHST7Q9NS84 486 aa11.17□□□□□ -0.62
PABPC1-203ENST00000517921 TMEM30AQ9NV96 361 aa11.17□□□□□ -0.62
PABPC1-203ENST00000517921 SPG21Q9NZD8 308 aa11.17□□□□□ -0.62
PABPC1-203ENST00000517921 CTTNBP2NLQ9P2B4 639 aa11.17□□□□□ -0.62
PABPC1-203ENST00000517921 UVRAGQ9P2Y5 699 aa11.17□□□□□ -0.62
PABPC1-203ENST00000517921 CHORDC1Q9UHD1 332 aaPredicted RBP11.17□□□□□ -0.62
PABPC1-203ENST00000517921 STRIP2Q9ULQ0 834 aa11.17□□□□□ -0.62
PABPC1-203ENST00000517921 SZT2Q5T011 3432 aa11.16□□□□□ -0.62
PABPC1-203ENST00000517921 E5RJQ4 531 aa11.16□□□□□ -0.62
PABPC1-203ENST00000517921 H7C4K7 107 aa11.16□□□□□ -0.62
PABPC1-203ENST00000517921 TLL1O43897 1013 aa11.16□□□□□ -0.62
PABPC1-203ENST00000517921 PALMO75781 387 aa11.16□□□□□ -0.62
PABPC1-203ENST00000517921 AP1G2O75843 785 aa11.16□□□□□ -0.62
PABPC1-203ENST00000517921 GABBR2O75899 941 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms