RNA–Protein interactions for RNA: ENST00000517494.1

CSGALNACT1-204, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

TSL 3

Gene CSGALNACT1, Length 766 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-204ENST00000517494 TRMT2BQ96GJ1 504 aaKnown RBP16.33■□□□□ 0.2
CSGALNACT1-204ENST00000517494 MTMR12Q9C0I1 747 aa16.33■□□□□ 0.2
CSGALNACT1-204ENST00000517494 PCIF1Q9H4Z3 704 aa16.33■□□□□ 0.2
CSGALNACT1-204ENST00000517494 CCDC39Q9UFE4 941 aa16.33■□□□□ 0.2
CSGALNACT1-204ENST00000517494 ITGA11Q9UKX5 1188 aa16.33■□□□□ 0.2
CSGALNACT1-204ENST00000517494 USP24Q9UPU5 2620 aa16.33■□□□□ 0.2
CSGALNACT1-204ENST00000517494 GREB1Q4ZG55 1949 aa16.33■□□□□ 0.2
CSGALNACT1-204ENST00000517494 VPS37CA5D8V6 355 aaPredicted RBP16.32■□□□□ 0.2
CSGALNACT1-204ENST00000517494 GIPC1O14908 333 aa16.32■□□□□ 0.2
CSGALNACT1-204ENST00000517494 PPP1R37O75864 691 aa16.32■□□□□ 0.2
CSGALNACT1-204ENST00000517494 HDCP19113 662 aa16.32■□□□□ 0.2
CSGALNACT1-204ENST00000517494 LHX1P48742 406 aa16.32■□□□□ 0.2
CSGALNACT1-204ENST00000517494 RBP5P82980 135 aa16.32■□□□□ 0.2
CSGALNACT1-204ENST00000517494 SHC2P98077 582 aa16.32■□□□□ 0.2
CSGALNACT1-204ENST00000517494 FOXC1Q12948 553 aa16.32■□□□□ 0.2
CSGALNACT1-204ENST00000517494 C8orf34Q49A92 452 aa16.32■□□□□ 0.2
CSGALNACT1-204ENST00000517494 USP39Q53GS9 565 aaKnown RBP16.32■□□□□ 0.2
CSGALNACT1-204ENST00000517494 BRAPQ7Z569 592 aa16.32■□□□□ 0.2
CSGALNACT1-204ENST00000517494 CCDC33Q8N5R6 958 aa16.32■□□□□ 0.2
CSGALNACT1-204ENST00000517494 LRRC52Q8N7C0 313 aa16.32■□□□□ 0.2
CSGALNACT1-204ENST00000517494 MYRFLQ96LU7 910 aa16.32■□□□□ 0.2
CSGALNACT1-204ENST00000517494 LINC00597Q9H2U6 94 aa16.32■□□□□ 0.2
CSGALNACT1-204ENST00000517494 PDE11AQ9HCR9 933 aa16.32■□□□□ 0.2
CSGALNACT1-204ENST00000517494 EBF1Q9UH73 591 aa16.32■□□□□ 0.2
CSGALNACT1-204ENST00000517494 TCHHQ07283 1943 aa16.31■□□□□ 0.2
CSGALNACT1-204ENST00000517494 LNP1A1A4G5 178 aa16.31■□□□□ 0.2
CSGALNACT1-204ENST00000517494 BCLAF3A2AJT9 711 aaKnown RBP16.31■□□□□ 0.2
CSGALNACT1-204ENST00000517494 MYMKA6NI61 221 aa16.31■□□□□ 0.2
CSGALNACT1-204ENST00000517494 SCAMP3O14828 347 aaKnown RBP16.31■□□□□ 0.2
CSGALNACT1-204ENST00000517494 ATP2C2O75185 946 aa16.31■□□□□ 0.2
CSGALNACT1-204ENST00000517494 NFATC1O95644 943 aa16.31■□□□□ 0.2
CSGALNACT1-204ENST00000517494 LDHAP00338 332 aaKnown RBP16.31■□□□□ 0.2
CSGALNACT1-204ENST00000517494 GAP43P17677 238 aa16.31■□□□□ 0.2
CSGALNACT1-204ENST00000517494 ANXA13P27216 316 aa16.31■□□□□ 0.2
CSGALNACT1-204ENST00000517494 GRIK1P39086 918 aa16.31■□□□□ 0.2
CSGALNACT1-204ENST00000517494 TXLNAP40222 546 aa16.31■□□□□ 0.2
CSGALNACT1-204ENST00000517494 DHPSP49366 369 aaPredicted RBP16.31■□□□□ 0.2
CSGALNACT1-204ENST00000517494 CASP5P51878 434 aa16.31■□□□□ 0.2
CSGALNACT1-204ENST00000517494 CYP27A1Q02318 531 aa16.31■□□□□ 0.2
CSGALNACT1-204ENST00000517494 ZNF252P-AS1Q0IIN9 211 aa16.31■□□□□ 0.2
CSGALNACT1-204ENST00000517494 CFAP221Q4G0U5 840 aa16.31■□□□□ 0.2
CSGALNACT1-204ENST00000517494 DAB2IPQ5VWQ8 1189 aa16.31■□□□□ 0.2
CSGALNACT1-204ENST00000517494 RRAGBQ5VZM2 374 aa16.31■□□□□ 0.2
CSGALNACT1-204ENST00000517494 C4orf50Q6ZRC1 276 aa16.31■□□□□ 0.2
CSGALNACT1-204ENST00000517494 SV2BQ7L1I2 683 aa16.31■□□□□ 0.2
CSGALNACT1-204ENST00000517494 CYP2U1Q7Z449 544 aa16.31■□□□□ 0.2
CSGALNACT1-204ENST00000517494 TOP6BLQ8N6T0 577 aa16.31■□□□□ 0.2
CSGALNACT1-204ENST00000517494 CCDC26Q8TAB7 109 aa16.31■□□□□ 0.2
CSGALNACT1-204ENST00000517494 MYLPFQ96A32 169 aa16.31■□□□□ 0.2
CSGALNACT1-204ENST00000517494 PKMYT1Q99640 499 aa16.31■□□□□ 0.2
CSGALNACT1-204ENST00000517494 SYT15Q9BQS2 421 aa16.31■□□□□ 0.2
CSGALNACT1-204ENST00000517494 CBWD1Q9BRT8 395 aa16.31■□□□□ 0.2
CSGALNACT1-204ENST00000517494 GCNT4Q9P109 453 aa16.31■□□□□ 0.2
CSGALNACT1-204ENST00000517494 SEL1LQ9UBV2 794 aa16.31■□□□□ 0.2
CSGALNACT1-204ENST00000517494 STK17AQ9UEE5 414 aa16.31■□□□□ 0.2
CSGALNACT1-204ENST00000517494 ATG2BQ96BY7 2078 aa16.31■□□□□ 0.2
CSGALNACT1-204ENST00000517494 KHNYNO15037 678 aaKnown RBP16.3■□□□□ 0.2
CSGALNACT1-204ENST00000517494 ABL1P00519 1130 aa16.3■□□□□ 0.2
CSGALNACT1-204ENST00000517494 BCKDHBP21953 392 aa16.3■□□□□ 0.2
CSGALNACT1-204ENST00000517494 BDNFP23560 247 aa16.3■□□□□ 0.2
CSGALNACT1-204ENST00000517494 PDE6CP51160 858 aa16.3■□□□□ 0.2
CSGALNACT1-204ENST00000517494 MYO1EQ12965 1108 aa16.3■□□□□ 0.2
CSGALNACT1-204ENST00000517494 SOWAHAQ2M3V2 549 aa16.3■□□□□ 0.2
CSGALNACT1-204ENST00000517494 UAP1L1Q3KQV9 507 aa16.3■□□□□ 0.2
CSGALNACT1-204ENST00000517494 SH3PXD2AQ5TCZ1 1133 aa16.3■□□□□ 0.2
CSGALNACT1-204ENST00000517494 ERICH6BQ5W0A0 696 aa16.3■□□□□ 0.2
CSGALNACT1-204ENST00000517494 PMS2CLQ68D20 193 aa16.3■□□□□ 0.2
CSGALNACT1-204ENST00000517494 USP33Q8TEY7 942 aa16.3■□□□□ 0.2
CSGALNACT1-204ENST00000517494 FUBP3Q96I24 572 aaKnown RBP eCLIP16.3■□□□□ 0.2
CSGALNACT1-204ENST00000517494 ANKRD36BP1Q96IX9 119 aa16.3■□□□□ 0.2
CSGALNACT1-204ENST00000517494 SMPD4Q9NXE4 827 aa16.3■□□□□ 0.2
CSGALNACT1-204ENST00000517494 GDAP2Q9NXN4 497 aa16.3■□□□□ 0.2
CSGALNACT1-204ENST00000517494 MAGEC2Q9UBF1 373 aaPredicted RBP16.3■□□□□ 0.2
CSGALNACT1-204ENST00000517494 SIX4Q9UIU6 781 aa16.3■□□□□ 0.2
CSGALNACT1-204ENST00000517494 ARHGAP26Q9UNA1 814 aa16.3■□□□□ 0.2
CSGALNACT1-204ENST00000517494 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.3■□□□□ 0.2
CSGALNACT1-204ENST00000517494 PCDHB13Q9Y5F0 798 aa16.3■□□□□ 0.2
CSGALNACT1-204ENST00000517494 CLIC4Q9Y696 253 aa16.3■□□□□ 0.2
CSGALNACT1-204ENST00000517494 SPAG17Q6Q759 2223 aa16.29■□□□□ 0.2
CSGALNACT1-204ENST00000517494 ANTXRLA6NF34 631 aa16.29■□□□□ 0.2
CSGALNACT1-204ENST00000517494 C1QTNF9BB2RNN3 333 aa16.29■□□□□ 0.2
CSGALNACT1-204ENST00000517494 PATE3B3GLJ2 98 aa16.29■□□□□ 0.2
CSGALNACT1-204ENST00000517494 LEFTY2O00292 366 aa16.29■□□□□ 0.2
CSGALNACT1-204ENST00000517494 TNNC2P02585 160 aa16.29■□□□□ 0.2
CSGALNACT1-204ENST00000517494 PDGFRBP09619 1106 aa16.29■□□□□ 0.2
CSGALNACT1-204ENST00000517494 C1QTNF9P0C862 333 aa16.29■□□□□ 0.2
CSGALNACT1-204ENST00000517494 SPINK2P20155 84 aa16.29■□□□□ 0.2
CSGALNACT1-204ENST00000517494 GARTP22102 1010 aa16.29■□□□□ 0.2
CSGALNACT1-204ENST00000517494 LMO2P25791 158 aa16.29■□□□□ 0.2
CSGALNACT1-204ENST00000517494 CEBPZQ03701 1054 aaKnown RBP16.29■□□□□ 0.2
CSGALNACT1-204ENST00000517494 C11orf74Q86VG3 221 aa16.29■□□□□ 0.2
CSGALNACT1-204ENST00000517494 PIGKQ92643 395 aa16.29■□□□□ 0.2
CSGALNACT1-204ENST00000517494 HPDLQ96IR7 371 aa16.29■□□□□ 0.2
CSGALNACT1-204ENST00000517494 CLIC6Q96NY7 704 aa16.29■□□□□ 0.2
CSGALNACT1-204ENST00000517494 MMS19Q96T76 1030 aa16.29■□□□□ 0.2
CSGALNACT1-204ENST00000517494 STRA6Q9BX79 667 aa16.29■□□□□ 0.2
CSGALNACT1-204ENST00000517494 FGFBP2Q9BYJ0 223 aa16.29■□□□□ 0.2
CSGALNACT1-204ENST00000517494 TMEM9BQ9NQ34 198 aa16.29■□□□□ 0.2
CSGALNACT1-204ENST00000517494 TRPM5Q9NZQ8 1165 aa16.29■□□□□ 0.2
CSGALNACT1-204ENST00000517494 LAMA1P25391 3075 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms