RNA–Protein interactions for RNA: ENST00000517325.5

CHMP7-203, Transcript of charged multivesicular body protein 7, humanhuman

TSL 2

Gene CHMP7, Length 2,639 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP7-203ENST00000517325 TLDC1Q6P9B6 456 aa17.56■□□□□ 0.4
CHMP7-203ENST00000517325 CYP4X1Q8N118 509 aa17.56■□□□□ 0.4
CHMP7-203ENST00000517325 CCHCR1Q8TD31 782 aa17.56■□□□□ 0.4
CHMP7-203ENST00000517325 H3BRB1 525 aa17.56■□□□□ 0.4
CHMP7-203ENST00000517325 TCEA3O75764 348 aa17.56■□□□□ 0.4
CHMP7-203ENST00000517325 SNAI1O95863 264 aaPredicted RBP17.56■□□□□ 0.4
CHMP7-203ENST00000517325 CDC25CP30307 473 aa17.56■□□□□ 0.4
CHMP7-203ENST00000517325 MAGEA4P43358 317 aa17.56■□□□□ 0.4
CHMP7-203ENST00000517325 ELF3P78545 371 aaPredicted RBP17.56■□□□□ 0.4
CHMP7-203ENST00000517325 MKRN3Q13064 507 aaKnown RBP17.56■□□□□ 0.4
CHMP7-203ENST00000517325 XRCC4Q13426 336 aa17.56■□□□□ 0.4
CHMP7-203ENST00000517325 MAP1SQ66K74 1059 aaPredicted RBP17.56■□□□□ 0.4
CHMP7-203ENST00000517325 CYP4F22Q6NT55 531 aa17.56■□□□□ 0.4
CHMP7-203ENST00000517325 VSTM1Q6UX27 236 aa17.56■□□□□ 0.4
CHMP7-203ENST00000517325 SLC35B2Q8TB61 432 aa17.56■□□□□ 0.4
CHMP7-203ENST00000517325 EMID1Q96A84 441 aaPredicted RBP17.56■□□□□ 0.4
CHMP7-203ENST00000517325 TUT1Q9H6E5 874 aaKnown RBP17.56■□□□□ 0.4
CHMP7-203ENST00000517325 ITGAVP06756 1048 aa17.55■□□□□ 0.4
CHMP7-203ENST00000517325 CD48P09326 243 aa17.55■□□□□ 0.4
CHMP7-203ENST00000517325 PECAM1P16284 738 aaPredicted RBP17.55■□□□□ 0.4
CHMP7-203ENST00000517325 GPD2P43304 727 aa17.55■□□□□ 0.4
CHMP7-203ENST00000517325 MARCH8Q5T0T0 291 aa17.55■□□□□ 0.4
CHMP7-203ENST00000517325 DPH6Q7L8W6 267 aa17.55■□□□□ 0.4
CHMP7-203ENST00000517325 STAMBPL1Q96FJ0 436 aa17.55■□□□□ 0.4
CHMP7-203ENST00000517325 CCDC134Q9H6E4 229 aa17.55■□□□□ 0.4
CHMP7-203ENST00000517325 CYP3A43Q9HB55 503 aa17.55■□□□□ 0.4
CHMP7-203ENST00000517325 NOD2Q9HC29 1040 aa17.55■□□□□ 0.4
CHMP7-203ENST00000517325 WDR35Q9P2L0 1181 aa17.55■□□□□ 0.4
CHMP7-203ENST00000517325 L3MBTL1Q9Y468 752 aa17.55■□□□□ 0.4
CHMP7-203ENST00000517325 COL1A2P08123 1366 aa17.55■□□□□ 0.4
CHMP7-203ENST00000517325 MGRN1O60291 552 aa17.55■□□□□ 0.4
CHMP7-203ENST00000517325 ATP6V1G2O95670 118 aa17.55■□□□□ 0.4
CHMP7-203ENST00000517325 GBP2P32456 591 aaPredicted RBP17.55■□□□□ 0.4
CHMP7-203ENST00000517325 PLCB3Q01970 1234 aa17.55■□□□□ 0.4
CHMP7-203ENST00000517325 ZNF268Q14587 947 aaPredicted RBP17.55■□□□□ 0.4
CHMP7-203ENST00000517325 UBA3Q8TBC4 463 aa17.55■□□□□ 0.4
CHMP7-203ENST00000517325 GTF3C2Q8WUA4 911 aaPredicted RBP17.55■□□□□ 0.4
CHMP7-203ENST00000517325 THOC1Q96FV9 657 aaKnown RBP17.55■□□□□ 0.4
CHMP7-203ENST00000517325 HEXIM2Q96MH2 286 aaKnown RBP17.55■□□□□ 0.4
CHMP7-203ENST00000517325 C10orf88Q9H8K7 445 aa17.55■□□□□ 0.4
CHMP7-203ENST00000517325 SAYSD1Q9NPB0 183 aa17.55■□□□□ 0.4
CHMP7-203ENST00000517325 TBK1Q9UHD2 729 aa17.55■□□□□ 0.4
CHMP7-203ENST00000517325 PCSK1NQ9UHG2 260 aa17.55■□□□□ 0.4
CHMP7-203ENST00000517325 TMEM120BA0PK00 339 aa17.54■□□□□ 0.4
CHMP7-203ENST00000517325 BTBD19C9JJ37 291 aa17.54■□□□□ 0.4
CHMP7-203ENST00000517325 SGK1O00141 431 aa17.54■□□□□ 0.4
CHMP7-203ENST00000517325 IFNB1P01574 187 aa17.54■□□□□ 0.4
CHMP7-203ENST00000517325 KRT7P08729 469 aa17.54■□□□□ 0.4
CHMP7-203ENST00000517325 CYP3A5P20815 502 aa17.54■□□□□ 0.4
CHMP7-203ENST00000517325 GABRB2P47870 512 aa17.54■□□□□ 0.4
CHMP7-203ENST00000517325 FASTKD3Q14CZ7 662 aaKnown RBP17.54■□□□□ 0.4
CHMP7-203ENST00000517325 LRRC14Q15048 493 aa17.54■□□□□ 0.4
CHMP7-203ENST00000517325 TAF5Q15542 800 aa17.54■□□□□ 0.4
CHMP7-203ENST00000517325 LRRC34Q8IZ02 419 aa17.54■□□□□ 0.4
CHMP7-203ENST00000517325 ACTL9Q8TC94 416 aa17.54■□□□□ 0.4
CHMP7-203ENST00000517325 MCRS1Q96EZ8 462 aa17.54■□□□□ 0.4
CHMP7-203ENST00000517325 MS4A4AQ96JQ5 239 aa17.54■□□□□ 0.4
CHMP7-203ENST00000517325 SYT17Q9BSW7 474 aa17.54■□□□□ 0.4
CHMP7-203ENST00000517325 FOXP3Q9BZS1 431 aa17.54■□□□□ 0.4
CHMP7-203ENST00000517325 CXCL16Q9H2A7 254 aa17.54■□□□□ 0.4
CHMP7-203ENST00000517325 ZNF408Q9H9D4 720 aa17.54■□□□□ 0.4
CHMP7-203ENST00000517325 DPP3Q9NY33 737 aa17.54■□□□□ 0.4
CHMP7-203ENST00000517325 GGT7Q9UJ14 662 aa17.54■□□□□ 0.4
CHMP7-203ENST00000517325 CST8O60676 142 aa17.54■□□□□ 0.4
CHMP7-203ENST00000517325 KDELR1P24390 212 aa17.54■□□□□ 0.4
CHMP7-203ENST00000517325 NDST1P52848 882 aa17.54■□□□□ 0.4
CHMP7-203ENST00000517325 OTUD4Q01804 1114 aaKnown RBP17.54■□□□□ 0.4
CHMP7-203ENST00000517325 GRIK4Q16099 956 aa17.54■□□□□ 0.4
CHMP7-203ENST00000517325 HADHQ16836 314 aaKnown RBP17.54■□□□□ 0.4
CHMP7-203ENST00000517325 LACTB2Q53H82 288 aaPredicted RBP17.54■□□□□ 0.4
CHMP7-203ENST00000517325 RNASEH2BQ5TBB1 312 aaKnown RBP17.54■□□□□ 0.4
CHMP7-203ENST00000517325 NAIF1Q69YI7 327 aaPredicted RBP17.54■□□□□ 0.4
CHMP7-203ENST00000517325 MGARPQ8TDB4 240 aa17.54■□□□□ 0.4
CHMP7-203ENST00000517325 ACAP3Q96P50 834 aa17.54■□□□□ 0.4
CHMP7-203ENST00000517325 LGALS13Q9UHV8 139 aa17.54■□□□□ 0.4
CHMP7-203ENST00000517325 A0A1B0GUA9 196 aa17.53■□□□□ 0.4
CHMP7-203ENST00000517325 HMGCRP04035 888 aa17.53■□□□□ 0.4
CHMP7-203ENST00000517325 VDRP11473 427 aa17.53■□□□□ 0.4
CHMP7-203ENST00000517325 P4HA1P13674 534 aa17.53■□□□□ 0.4
CHMP7-203ENST00000517325 ATP5DP30049 168 aa17.53■□□□□ 0.4
CHMP7-203ENST00000517325 GDF10P55107 478 aa17.53■□□□□ 0.4
CHMP7-203ENST00000517325 INCA1Q0VD86 236 aa17.53■□□□□ 0.4
CHMP7-203ENST00000517325 TAZQ16635 292 aa17.53■□□□□ 0.4
CHMP7-203ENST00000517325 HP1BP3Q5SSJ5 553 aaPredicted RBP17.53■□□□□ 0.4
CHMP7-203ENST00000517325 PNMA8AQ86V59 439 aaPredicted RBP17.53■□□□□ 0.4
CHMP7-203ENST00000517325 UPF1Q92900 1129 aaKnown RBP eCLIP17.53■□□□□ 0.42e-10■■■■■ 29.6
CHMP7-203ENST00000517325 PCDH9Q9HC56 1237 aa17.53■□□□□ 0.4
CHMP7-203ENST00000517325 EURLQ9NYK6 297 aa17.53■□□□□ 0.4
CHMP7-203ENST00000517325 ITGA11Q9UKX5 1188 aa17.53■□□□□ 0.4
CHMP7-203ENST00000517325 BARX2Q9UMQ3 279 aaPredicted RBP17.53■□□□□ 0.4
CHMP7-203ENST00000517325 NAALADL1Q9UQQ1 740 aa17.53■□□□□ 0.4
CHMP7-203ENST00000517325 C2CD2Q9Y426 696 aa17.53■□□□□ 0.4
CHMP7-203ENST00000517325 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.53■□□□□ 0.4
CHMP7-203ENST00000517325 PIK3R2O00459 728 aa17.53■□□□□ 0.4
CHMP7-203ENST00000517325 SMPD1P17405 629 aa17.53■□□□□ 0.4
CHMP7-203ENST00000517325 MIPP30301 263 aa17.53■□□□□ 0.4
CHMP7-203ENST00000517325 MYO1EQ12965 1108 aa17.53■□□□□ 0.4
CHMP7-203ENST00000517325 MPP2Q14168 576 aa17.53■□□□□ 0.4
CHMP7-203ENST00000517325 FAM102AQ5T9C2 384 aaPredicted RBP17.53■□□□□ 0.4
CHMP7-203ENST00000517325 BBS12Q6ZW61 710 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms