RNA–Protein interactions for RNA: ENST00000517251.1

SCARNA20.6-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 106 nt, Biotype scaRNA, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.6-201ENST00000517251 EMC1Q8N766 993 aa3.42□□□□□ -1.86
SCARNA20.6-201ENST00000517251 PLD5Q8N7P1 536 aa3.42□□□□□ -1.86
SCARNA20.6-201ENST00000517251 ANKS4BQ8N8V4 417 aa3.42□□□□□ -1.86
SCARNA20.6-201ENST00000517251 CCDC89Q8N998 374 aa3.42□□□□□ -1.86
SCARNA20.6-201ENST00000517251 RNF149Q8NC42 400 aa3.42□□□□□ -1.86
SCARNA20.6-201ENST00000517251 CMASQ8NFW8 434 aaPredicted RBP3.42□□□□□ -1.86
SCARNA20.6-201ENST00000517251 GADD45GIP1Q8TAE8 222 aaPredicted RBP3.42□□□□□ -1.86
SCARNA20.6-201ENST00000517251 ACTL9Q8TC94 416 aa3.42□□□□□ -1.86
SCARNA20.6-201ENST00000517251 MAIP1Q8WWC4 291 aa3.42□□□□□ -1.86
SCARNA20.6-201ENST00000517251 SEPT1Q8WYJ6 367 aa3.42□□□□□ -1.86
SCARNA20.6-201ENST00000517251 PTPRN2Q92932 1015 aa3.42□□□□□ -1.86
SCARNA20.6-201ENST00000517251 ARHGEF2Q92974 986 aaKnown RBP3.42□□□□□ -1.86
SCARNA20.6-201ENST00000517251 HAUS1Q96CS2 278 aa3.42□□□□□ -1.86
SCARNA20.6-201ENST00000517251 CDCA5Q96FF9 252 aa3.42□□□□□ -1.86
SCARNA20.6-201ENST00000517251 OTUD5Q96G74 571 aa3.42□□□□□ -1.86
SCARNA20.6-201ENST00000517251 CABS1Q96KC9 395 aa3.42□□□□□ -1.86
SCARNA20.6-201ENST00000517251 SNX27Q96L92 541 aa3.42□□□□□ -1.86
SCARNA20.6-201ENST00000517251 C9orf72Q96LT7 481 aa3.42□□□□□ -1.86
SCARNA20.6-201ENST00000517251 CCDC114Q96M63 670 aa3.42□□□□□ -1.86
SCARNA20.6-201ENST00000517251 FNBP1Q96RU3 617 aa3.42□□□□□ -1.86
SCARNA20.6-201ENST00000517251 PRMT1Q99873 361 aaKnown RBP3.42□□□□□ -1.86
SCARNA20.6-201ENST00000517251 GORASP1Q9BQQ3 440 aa3.42□□□□□ -1.86
SCARNA20.6-201ENST00000517251 C16orf70Q9BSU1 422 aa3.42□□□□□ -1.86
SCARNA20.6-201ENST00000517251 HEMGNQ9BXL5 484 aa3.42□□□□□ -1.86
SCARNA20.6-201ENST00000517251 ZNF518BQ9C0D4 1074 aa3.42□□□□□ -1.86
SCARNA20.6-201ENST00000517251 C2orf40Q9H1Z8 148 aa3.42□□□□□ -1.86
SCARNA20.6-201ENST00000517251 KDM4CQ9H3R0 1056 aa3.42□□□□□ -1.86
SCARNA20.6-201ENST00000517251 CENPHQ9H3R5 247 aa3.42□□□□□ -1.86
SCARNA20.6-201ENST00000517251 MRPL47Q9HD33 250 aaKnown RBP3.42□□□□□ -1.86
SCARNA20.6-201ENST00000517251 PDGFCQ9NRA1 345 aa3.42□□□□□ -1.86
SCARNA20.6-201ENST00000517251 ADARB2Q9NS39 739 aaKnown RBP3.42□□□□□ -1.86
SCARNA20.6-201ENST00000517251 INTS9Q9NV88 658 aaKnown RBP3.42□□□□□ -1.86
SCARNA20.6-201ENST00000517251 PARVAQ9NVD7 372 aa3.42□□□□□ -1.86
SCARNA20.6-201ENST00000517251 MKS1Q9NXB0 559 aa3.42□□□□□ -1.86
SCARNA20.6-201ENST00000517251 CNTN3Q9P232 1028 aa3.42□□□□□ -1.86
SCARNA20.6-201ENST00000517251 MORF4L1Q9UBU8 362 aa3.42□□□□□ -1.86
SCARNA20.6-201ENST00000517251 IP6K2Q9UHH9 426 aa3.42□□□□□ -1.86
SCARNA20.6-201ENST00000517251 PNMA3Q9UL41 463 aa3.42□□□□□ -1.86
SCARNA20.6-201ENST00000517251 NEU3Q9UQ49 428 aa3.42□□□□□ -1.86
SCARNA20.6-201ENST00000517251 CAPN7Q9Y6W3 813 aa3.42□□□□□ -1.86
SCARNA20.6-201ENST00000517251 PCM1Q15154 2024 aa3.42□□□□□ -1.86
SCARNA20.6-201ENST00000517251 A0A087WZ62 844 aa3.41□□□□□ -1.86
SCARNA20.6-201ENST00000517251 C11orf97A0A1B0GVM6 126 aaPredicted RBP3.41□□□□□ -1.86
SCARNA20.6-201ENST00000517251 HMX2A2RU54 273 aa3.41□□□□□ -1.86
SCARNA20.6-201ENST00000517251 LRRD1A4D1F6 860 aa3.41□□□□□ -1.86
SCARNA20.6-201ENST00000517251 SIGLEC16A6NMB1 481 aa3.41□□□□□ -1.86
SCARNA20.6-201ENST00000517251 A8MUI8 341 aa3.41□□□□□ -1.86
SCARNA20.6-201ENST00000517251 LACTBL1A8MY62 500 aa3.41□□□□□ -1.86
SCARNA20.6-201ENST00000517251 APOC4-APOC2K7ER74 178 aa3.41□□□□□ -1.86
SCARNA20.6-201ENST00000517251 M0QYV0 167 aa3.41□□□□□ -1.86
SCARNA20.6-201ENST00000517251 CXCL11O14625 94 aa3.41□□□□□ -1.86
SCARNA20.6-201ENST00000517251 ALOX15BO15296 676 aa3.41□□□□□ -1.86
SCARNA20.6-201ENST00000517251 HCRTO43612 131 aa3.41□□□□□ -1.86
SCARNA20.6-201ENST00000517251 HBP1O60381 514 aa3.41□□□□□ -1.86
SCARNA20.6-201ENST00000517251 EDF1O60869 148 aaKnown RBP3.41□□□□□ -1.86
SCARNA20.6-201ENST00000517251 DDNO94850 711 aaPredicted RBP3.41□□□□□ -1.86
SCARNA20.6-201ENST00000517251 KIAA0754O94854 1291 aa3.41□□□□□ -1.86
SCARNA20.6-201ENST00000517251 SLC25A27O95847 323 aa3.41□□□□□ -1.86
SCARNA20.6-201ENST00000517251 F2P00734 622 aa3.41□□□□□ -1.86
SCARNA20.6-201ENST00000517251 IL1BP01584 269 aa3.41□□□□□ -1.86
SCARNA20.6-201ENST00000517251 APOC2P02655 101 aa3.41□□□□□ -1.86
SCARNA20.6-201ENST00000517251 AMHP03971 560 aa3.41□□□□□ -1.86
SCARNA20.6-201ENST00000517251 ITGB3P05106 788 aa3.41□□□□□ -1.86
SCARNA20.6-201ENST00000517251 MMP3P08254 477 aa3.41□□□□□ -1.86
SCARNA20.6-201ENST00000517251 KRT16P08779 473 aa3.41□□□□□ -1.86
SCARNA20.6-201ENST00000517251 POTEJP0CG39 1038 aa3.41□□□□□ -1.86
SCARNA20.6-201ENST00000517251 VAV1P15498 845 aa3.41□□□□□ -1.86
SCARNA20.6-201ENST00000517251 YBX3P16989 372 aaKnown RBP eCLIP3.41□□□□□ -1.86
SCARNA20.6-201ENST00000517251 ATF7P17544 494 aaPredicted RBP3.41□□□□□ -1.86
SCARNA20.6-201ENST00000517251 TFE3P19532 575 aaPredicted RBP3.41□□□□□ -1.86
SCARNA20.6-201ENST00000517251 IL4RP24394 825 aa3.41□□□□□ -1.86
SCARNA20.6-201ENST00000517251 MIPP30301 263 aa3.41□□□□□ -1.86
SCARNA20.6-201ENST00000517251 POLR2BP30876 1174 aaKnown RBP3.41□□□□□ -1.86
SCARNA20.6-201ENST00000517251 RPL22P35268 128 aaKnown RBP3.41□□□□□ -1.86
SCARNA20.6-201ENST00000517251 PCK1P35558 622 aa3.41□□□□□ -1.86
SCARNA20.6-201ENST00000517251 SCNN1AP37088 669 aa3.41□□□□□ -1.86
SCARNA20.6-201ENST00000517251 GRM5P41594 1212 aa3.41□□□□□ -1.86
SCARNA20.6-201ENST00000517251 SKIV2L2P42285 1042 aaKnown RBP3.41□□□□□ -1.86
SCARNA20.6-201ENST00000517251 MAGEA4P43358 317 aa3.41□□□□□ -1.86
SCARNA20.6-201ENST00000517251 CTCFP49711 727 aaPredicted RBP3.41□□□□□ -1.86
SCARNA20.6-201ENST00000517251 SLC26A2P50443 739 aa3.41□□□□□ -1.86
SCARNA20.6-201ENST00000517251 ZNF143P52747 638 aaPredicted RBP3.41□□□□□ -1.86
SCARNA20.6-201ENST00000517251 YARSP54577 528 aaKnown RBP3.41□□□□□ -1.86
SCARNA20.6-201ENST00000517251 CDH8P55286 799 aa3.41□□□□□ -1.86
SCARNA20.6-201ENST00000517251 HDAC4P56524 1084 aa3.41□□□□□ -1.86
SCARNA20.6-201ENST00000517251 KCNJ2P63252 427 aa3.41□□□□□ -1.86
SCARNA20.6-201ENST00000517251 IFFO1Q0D2I5 559 aa3.41□□□□□ -1.86
SCARNA20.6-201ENST00000517251 CCDC15Q0P6D6 951 aa3.41□□□□□ -1.86
SCARNA20.6-201ENST00000517251 BNIP1Q12981 228 aa3.41□□□□□ -1.86
SCARNA20.6-201ENST00000517251 MMRN1Q13201 1228 aa3.41□□□□□ -1.86
SCARNA20.6-201ENST00000517251 GRB14Q14449 540 aa3.41□□□□□ -1.86
SCARNA20.6-201ENST00000517251 STAT4Q14765 748 aa3.41□□□□□ -1.86
SCARNA20.6-201ENST00000517251 R3HDM1Q15032 1099 aaKnown RBP3.41□□□□□ -1.86
SCARNA20.6-201ENST00000517251 SURF1Q15526 300 aa3.41□□□□□ -1.86
SCARNA20.6-201ENST00000517251 ZBTB6Q15916 424 aa3.41□□□□□ -1.86
SCARNA20.6-201ENST00000517251 PKN2Q16513 984 aaKnown RBP3.41□□□□□ -1.86
SCARNA20.6-201ENST00000517251 PDK4Q16654 411 aa3.41□□□□□ -1.86
SCARNA20.6-201ENST00000517251 MAPK6Q16659 721 aa3.41□□□□□ -1.86
SCARNA20.6-201ENST00000517251 HIF1AQ16665 826 aa3.41□□□□□ -1.86
SCARNA20.6-201ENST00000517251 CA9Q16790 459 aa3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms