RNA–Protein interactions for RNA: ENST00000517238.1

SNORA40.16-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 121 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.16-201ENST00000517238 ENGP17813 658 aa-0.65□□□□□ -2.51
SNORA40.16-201ENST00000517238 YY1P25490 414 aa-0.65□□□□□ -2.51
SNORA40.16-201ENST00000517238 KCNJ6P48051 423 aa-0.65□□□□□ -2.51
SNORA40.16-201ENST00000517238 ALDH9A1P49189 494 aa-0.65□□□□□ -2.51
SNORA40.16-201ENST00000517238 CLRN1P58418 232 aa-0.65□□□□□ -2.51
SNORA40.16-201ENST00000517238 LYZP61626 148 aa-0.65□□□□□ -2.51
SNORA40.16-201ENST00000517238 ALDH6A1Q02252 535 aaKnown RBP-0.65□□□□□ -2.51
SNORA40.16-201ENST00000517238 ENOX2Q16206 610 aaKnown RBP-0.65□□□□□ -2.51
SNORA40.16-201ENST00000517238 GNPTABQ3T906 1256 aa-0.65□□□□□ -2.51
SNORA40.16-201ENST00000517238 ZNF876PQ49A33 203 aa-0.65□□□□□ -2.51
SNORA40.16-201ENST00000517238 PLEKHO1Q53GL0 409 aaPredicted RBP-0.65□□□□□ -2.51
SNORA40.16-201ENST00000517238 FIGNQ5HY92 759 aa-0.65□□□□□ -2.51
SNORA40.16-201ENST00000517238 ZCCHC8Q6NZY4 707 aaKnown RBP-0.65□□□□□ -2.51
SNORA40.16-201ENST00000517238 CC2D1AQ6P1N0 951 aaPredicted RBP-0.65□□□□□ -2.51
SNORA40.16-201ENST00000517238 FAM196AQ6ZSG2 479 aa-0.65□□□□□ -2.51
SNORA40.16-201ENST00000517238 HPS6Q86YV9 775 aa-0.65□□□□□ -2.51
SNORA40.16-201ENST00000517238 BMPERQ8N8U9 685 aa-0.65□□□□□ -2.51
SNORA40.16-201ENST00000517238 BVESQ8NE79 360 aa-0.65□□□□□ -2.51
SNORA40.16-201ENST00000517238 SLC35B2Q8TB61 432 aa-0.65□□□□□ -2.51
SNORA40.16-201ENST00000517238 SH3TC2Q8TF17 1288 aa-0.65□□□□□ -2.51
SNORA40.16-201ENST00000517238 BTN2A2Q8WVV5 523 aa-0.65□□□□□ -2.51
SNORA40.16-201ENST00000517238 LPAR1Q92633 364 aa-0.65□□□□□ -2.51
SNORA40.16-201ENST00000517238 STAMQ92783 540 aa-0.65□□□□□ -2.51
SNORA40.16-201ENST00000517238 CD101Q93033 1021 aa-0.65□□□□□ -2.51
SNORA40.16-201ENST00000517238 SENP5Q96HI0 755 aaPredicted RBP-0.65□□□□□ -2.51
SNORA40.16-201ENST00000517238 F2RL3Q96RI0 385 aa-0.65□□□□□ -2.51
SNORA40.16-201ENST00000517238 PNKPQ96T60 521 aa-0.65□□□□□ -2.51
SNORA40.16-201ENST00000517238 OPRPNQ99935 248 aaPredicted RBP-0.65□□□□□ -2.51
SNORA40.16-201ENST00000517238 ZNF334Q9HCZ1 680 aaPredicted RBP-0.65□□□□□ -2.51
SNORA40.16-201ENST00000517238 PCDHA12Q9UN75 941 aa-0.65□□□□□ -2.51
SNORA40.16-201ENST00000517238 LIMCH1Q9UPQ0 1083 aa-0.65□□□□□ -2.51
SNORA40.16-201ENST00000517238 PCNX2A6NKB5 2137 aa-0.65□□□□□ -2.51
SNORA40.16-201ENST00000517238 PCNX3Q9H6A9 2034 aa-0.65□□□□□ -2.51
SNORA40.16-201ENST00000517238 FAM220BPB1ANY3 271 aa-0.66□□□□□ -2.52
SNORA40.16-201ENST00000517238 LRP3O75074 770 aa-0.66□□□□□ -2.52
SNORA40.16-201ENST00000517238 PRSS23O95084 383 aa-0.66□□□□□ -2.52
SNORA40.16-201ENST00000517238 TSHRP16473 764 aa-0.66□□□□□ -2.52
SNORA40.16-201ENST00000517238 CD40P25942 277 aa-0.66□□□□□ -2.52
SNORA40.16-201ENST00000517238 MCM4P33991 863 aa-0.66□□□□□ -2.52
SNORA40.16-201ENST00000517238 CARSP49589 748 aaKnown RBP-0.66□□□□□ -2.52
SNORA40.16-201ENST00000517238 ZNF84P51523 738 aa-0.66□□□□□ -2.52
SNORA40.16-201ENST00000517238 FMO1Q01740 532 aa-0.66□□□□□ -2.52
SNORA40.16-201ENST00000517238 ROR2Q01974 943 aaKnown RBP-0.66□□□□□ -2.52
SNORA40.16-201ENST00000517238 STIM1Q13586 685 aa-0.66□□□□□ -2.52
SNORA40.16-201ENST00000517238 TBCCQ15814 346 aa-0.66□□□□□ -2.52
SNORA40.16-201ENST00000517238 FAM187BQ17R55 369 aa-0.66□□□□□ -2.52
SNORA40.16-201ENST00000517238 HERC4Q5GLZ8 1057 aaPredicted RBP-0.66□□□□□ -2.52
SNORA40.16-201ENST00000517238 DCST1Q5T197 706 aa-0.66□□□□□ -2.52
SNORA40.16-201ENST00000517238 TMTC4Q5T4D3 741 aa-0.66□□□□□ -2.52
SNORA40.16-201ENST00000517238 UNC5AQ6ZN44 842 aa-0.66□□□□□ -2.52
SNORA40.16-201ENST00000517238 ARHGAP36Q6ZRI8 547 aa-0.66□□□□□ -2.52
SNORA40.16-201ENST00000517238 CLNKQ7Z7G1 428 aa-0.66□□□□□ -2.52
SNORA40.16-201ENST00000517238 TRIM59Q8IWR1 403 aa-0.66□□□□□ -2.52
SNORA40.16-201ENST00000517238 UNC5BQ8IZJ1 945 aa-0.66□□□□□ -2.52
SNORA40.16-201ENST00000517238 NAGSQ8N159 534 aa-0.66□□□□□ -2.52
SNORA40.16-201ENST00000517238 Q8NA96 180 aa-0.66□□□□□ -2.52
SNORA40.16-201ENST00000517238 PIK3C3Q8NEB9 887 aa-0.66□□□□□ -2.52
SNORA40.16-201ENST00000517238 OR2L2Q8NH16 312 aa-0.66□□□□□ -2.52
SNORA40.16-201ENST00000517238 SNX19Q92543 992 aa-0.66□□□□□ -2.52
SNORA40.16-201ENST00000517238 PPP1R14AQ96A00 147 aa-0.66□□□□□ -2.52
SNORA40.16-201ENST00000517238 LGALS12Q96DT0 336 aa-0.66□□□□□ -2.52
SNORA40.16-201ENST00000517238 CEP95Q96GE4 821 aa-0.66□□□□□ -2.52
SNORA40.16-201ENST00000517238 IL17FQ96PD4 163 aa-0.66□□□□□ -2.52
SNORA40.16-201ENST00000517238 IWS1Q96ST2 819 aa-0.66□□□□□ -2.52
SNORA40.16-201ENST00000517238 FZD3Q9NPG1 666 aa-0.66□□□□□ -2.52
SNORA40.16-201ENST00000517238 CYTL1Q9NRR1 136 aa-0.66□□□□□ -2.52
SNORA40.16-201ENST00000517238 APEX2Q9UBZ4 518 aa-0.66□□□□□ -2.52
SNORA40.16-201ENST00000517238 NAV2Q8IVL1 2488 aa-0.67□□□□□ -2.52
SNORA40.16-201ENST00000517238 A0A1W2PPC1 479 aa-0.67□□□□□ -2.52
SNORA40.16-201ENST00000517238 LRCOL1A6NCL2 159 aa-0.67□□□□□ -2.52
SNORA40.16-201ENST00000517238 OR6C75A6NL08 312 aa-0.67□□□□□ -2.52
SNORA40.16-201ENST00000517238 GOLGA6L22H0YM25 854 aa-0.67□□□□□ -2.52
SNORA40.16-201ENST00000517238 H3BRB1 525 aa-0.67□□□□□ -2.52
SNORA40.16-201ENST00000517238 FOXP2O15409 715 aa-0.67□□□□□ -2.52
SNORA40.16-201ENST00000517238 PJA2O43164 708 aa-0.67□□□□□ -2.52
SNORA40.16-201ENST00000517238 MSCO60682 206 aa-0.67□□□□□ -2.52
SNORA40.16-201ENST00000517238 ITGA10O75578 1167 aa-0.67□□□□□ -2.52
SNORA40.16-201ENST00000517238 GCATO75600 419 aa-0.67□□□□□ -2.52
SNORA40.16-201ENST00000517238 CPP00450 1065 aa-0.67□□□□□ -2.52
SNORA40.16-201ENST00000517238 CD5P06127 495 aa-0.67□□□□□ -2.52
SNORA40.16-201ENST00000517238 SNRPA1P09661 255 aaKnown RBP-0.67□□□□□ -2.52
SNORA40.16-201ENST00000517238 NPSP0C0P6 89 aa-0.67□□□□□ -2.52
SNORA40.16-201ENST00000517238 ZNF853P0CG23 659 aa-0.67□□□□□ -2.52
SNORA40.16-201ENST00000517238 DGKAP23743 735 aa-0.67□□□□□ -2.52
SNORA40.16-201ENST00000517238 TIMP3P35625 211 aa-0.67□□□□□ -2.52
SNORA40.16-201ENST00000517238 RENBPP51606 427 aa-0.67□□□□□ -2.52
SNORA40.16-201ENST00000517238 ALDH5A1P51649 535 aaPredicted RBP-0.67□□□□□ -2.52
SNORA40.16-201ENST00000517238 LIMK2P53671 638 aa-0.67□□□□□ -2.52
SNORA40.16-201ENST00000517238 HUNKP57058 714 aa-0.67□□□□□ -2.52
SNORA40.16-201ENST00000517238 SREBF2Q12772 1141 aa-0.67□□□□□ -2.52
SNORA40.16-201ENST00000517238 HDAC1Q13547 482 aaPredicted RBP-0.67□□□□□ -2.52
SNORA40.16-201ENST00000517238 C2orf83Q53S99 150 aa-0.67□□□□□ -2.52
SNORA40.16-201ENST00000517238 LDLRAD1Q5T700 205 aa-0.67□□□□□ -2.52
SNORA40.16-201ENST00000517238 TIFABQ6ZNK6 161 aa-0.67□□□□□ -2.52
SNORA40.16-201ENST00000517238 MON1BQ7L1V2 547 aa-0.67□□□□□ -2.52
SNORA40.16-201ENST00000517238 WDR53Q7Z5U6 358 aaPredicted RBP-0.67□□□□□ -2.52
SNORA40.16-201ENST00000517238 PNMA8AQ86V59 439 aaPredicted RBP-0.67□□□□□ -2.52
SNORA40.16-201ENST00000517238 PTRH1Q86Y79 214 aaKnown RBP-0.67□□□□□ -2.52
SNORA40.16-201ENST00000517238 GLYCTKQ8IVS8 523 aa-0.67□□□□□ -2.52
SNORA40.16-201ENST00000517238 DRC7Q8IY82 874 aa-0.67□□□□□ -2.52
Retrieved 100 of 20,778 RNA–protein pairs in 126.4 ms