RNA–Protein interactions for RNA: ENST00000516543.1

SNORA40.14-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 86 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.14-201ENST00000516543 SMAD5Q99717 465 aaKnown RBP3.01□□□□□ -1.93
SNORA40.14-201ENST00000516543 THAP7Q9BT49 309 aaPredicted RBP3.01□□□□□ -1.93
SNORA40.14-201ENST00000516543 PTDSS2Q9BVG9 487 aa3.01□□□□□ -1.93
SNORA40.14-201ENST00000516543 PNPOQ9NVS9 261 aa3.01□□□□□ -1.93
SNORA40.14-201ENST00000516543 CCNL1Q9UK58 526 aaPredicted RBP3.01□□□□□ -1.93
SNORA40.14-201ENST00000516543 PCDHA6Q9UN73 950 aa3.01□□□□□ -1.93
SNORA40.14-201ENST00000516543 SCAF8Q9UPN6 1271 aaKnown RBP3.01□□□□□ -1.93
SNORA40.14-201ENST00000516543 SH2B3Q9UQQ2 575 aa3.01□□□□□ -1.93
SNORA40.14-201ENST00000516543 LRP12Q9Y561 859 aa3.01□□□□□ -1.93
SNORA40.14-201ENST00000516543 FER1L4A9Z1Z3 1794 aa3.01□□□□□ -1.93
SNORA40.14-201ENST00000516543 TCRBV5S1A1TA0A578 114 aa3□□□□□ -1.93
SNORA40.14-201ENST00000516543 FCHO1O14526 889 aa3□□□□□ -1.93
SNORA40.14-201ENST00000516543 ARIH2O95376 493 aa3□□□□□ -1.93
SNORA40.14-201ENST00000516543 ATXN1LP0C7T5 689 aaKnown RBP3□□□□□ -1.93
SNORA40.14-201ENST00000516543 HOXD9P28356 352 aaPredicted RBP3□□□□□ -1.93
SNORA40.14-201ENST00000516543 PPIFP30405 207 aaKnown RBP3□□□□□ -1.93
SNORA40.14-201ENST00000516543 RENBPP51606 427 aa3□□□□□ -1.93
SNORA40.14-201ENST00000516543 POLGP54098 1239 aaPredicted RBP3□□□□□ -1.93
SNORA40.14-201ENST00000516543 NKX6-1P78426 367 aaPredicted RBP3□□□□□ -1.93
SNORA40.14-201ENST00000516543 GPSM2P81274 684 aa3□□□□□ -1.93
SNORA40.14-201ENST00000516543 IQCB1Q15051 598 aa3□□□□□ -1.93
SNORA40.14-201ENST00000516543 TRIP6Q15654 476 aaKnown RBP3□□□□□ -1.93
SNORA40.14-201ENST00000516543 CYP1B1Q16678 543 aa3□□□□□ -1.93
SNORA40.14-201ENST00000516543 RNASE12Q5GAN4 147 aaKnown RBP3□□□□□ -1.93
SNORA40.14-201ENST00000516543 L1TD1Q5T7N2 865 aaKnown RBP3□□□□□ -1.93
SNORA40.14-201ENST00000516543 USP45Q70EL2 814 aa3□□□□□ -1.93
SNORA40.14-201ENST00000516543 KRT73Q86Y46 540 aa3□□□□□ -1.93
SNORA40.14-201ENST00000516543 NANOGP1Q8N7R0 232 aa3□□□□□ -1.93
SNORA40.14-201ENST00000516543 TERB1Q8NA31 727 aa3□□□□□ -1.93
SNORA40.14-201ENST00000516543 PRPF38AQ8NAV1 312 aaKnown RBP3□□□□□ -1.93
SNORA40.14-201ENST00000516543 RP9Q8TA86 221 aaKnown RBP3□□□□□ -1.93
SNORA40.14-201ENST00000516543 DDX17Q92841 729 aaKnown RBP3□□□□□ -1.93
SNORA40.14-201ENST00000516543 DAZAP1Q96EP5 407 aaKnown RBP3□□□□□ -1.93
SNORA40.14-201ENST00000516543 HMCESQ96FZ2 354 aa3□□□□□ -1.93
SNORA40.14-201ENST00000516543 SLC13A1Q9BZW2 595 aa3□□□□□ -1.93
SNORA40.14-201ENST00000516543 CXorf36Q9H7Y0 433 aa3□□□□□ -1.93
SNORA40.14-201ENST00000516543 SPC25Q9HBM1 224 aa3□□□□□ -1.93
SNORA40.14-201ENST00000516543 WASHC2CQ9Y4E1 1318 aa2.99□□□□□ -1.93
SNORA40.14-201ENST00000516543 CCDC187A0A096LP49 1063 aa2.99□□□□□ -1.93
SNORA40.14-201ENST00000516543 H3BUI4 141 aa2.99□□□□□ -1.93
SNORA40.14-201ENST00000516543 H7C1Q1 480 aa2.99□□□□□ -1.93
SNORA40.14-201ENST00000516543 AP4M1O00189 453 aa2.99□□□□□ -1.93
SNORA40.14-201ENST00000516543 SLC16A6O15403 523 aa2.99□□□□□ -1.93
SNORA40.14-201ENST00000516543 GRPP07492 148 aa2.99□□□□□ -1.93
SNORA40.14-201ENST00000516543 POU2F2P09086 479 aa2.99□□□□□ -1.93
SNORA40.14-201ENST00000516543 CCND1P24385 295 aa2.99□□□□□ -1.93
SNORA40.14-201ENST00000516543 IL1R2P27930 398 aa2.99□□□□□ -1.93
SNORA40.14-201ENST00000516543 TKTP29401 623 aaKnown RBP2.99□□□□□ -1.93
SNORA40.14-201ENST00000516543 AMPD3Q01432 767 aa2.99□□□□□ -1.93
SNORA40.14-201ENST00000516543 LAMB3Q13751 1172 aa2.99□□□□□ -1.93
SNORA40.14-201ENST00000516543 E2F2Q14209 437 aa2.99□□□□□ -1.93
SNORA40.14-201ENST00000516543 TRIM71Q2Q1W2 868 aaKnown RBP2.99□□□□□ -1.93
SNORA40.14-201ENST00000516543 AWAT1Q58HT5 328 aa2.99□□□□□ -1.93
SNORA40.14-201ENST00000516543 PXDC1Q5TGL8 231 aa2.99□□□□□ -1.93
SNORA40.14-201ENST00000516543 SHC4Q6S5L8 630 aa2.99□□□□□ -1.93
SNORA40.14-201ENST00000516543 ABHD11Q8NFV4 315 aa2.99□□□□□ -1.93
SNORA40.14-201ENST00000516543 PRSS3P2Q8NHM4 247 aa2.99□□□□□ -1.93
SNORA40.14-201ENST00000516543 PLBD2Q8NHP8 589 aa2.99□□□□□ -1.93
SNORA40.14-201ENST00000516543 ADAMTS15Q8TE58 950 aa2.99□□□□□ -1.93
SNORA40.14-201ENST00000516543 SOCS4Q8WXH5 440 aa2.99□□□□□ -1.93
SNORA40.14-201ENST00000516543 SLC35A4Q96G79 324 aa2.99□□□□□ -1.93
SNORA40.14-201ENST00000516543 EFHD1Q9BUP0 239 aa2.99□□□□□ -1.93
SNORA40.14-201ENST00000516543 BRIP1Q9BX63 1249 aa2.99□□□□□ -1.93
SNORA40.14-201ENST00000516543 GTPBP4Q9BZE4 634 aaKnown RBP2.99□□□□□ -1.93
SNORA40.14-201ENST00000516543 CIPCQ9C0C6 399 aa2.99□□□□□ -1.93
SNORA40.14-201ENST00000516543 EBF3Q9H4W6 596 aa2.99□□□□□ -1.93
SNORA40.14-201ENST00000516543 ASIC5Q9NY37 505 aa2.99□□□□□ -1.93
SNORA40.14-201ENST00000516543 XPR1Q9UBH6 696 aa2.99□□□□□ -1.93
SNORA40.14-201ENST00000516543 GABRQQ9UN88 632 aa2.99□□□□□ -1.93
SNORA40.14-201ENST00000516543 TTC3P53804 2025 aa2.98□□□□□ -1.93
SNORA40.14-201ENST00000516543 POC1B-GALNT4F8VUJ3 575 aa2.98□□□□□ -1.93
SNORA40.14-201ENST00000516543 SOCS2O14508 198 aa2.98□□□□□ -1.93
SNORA40.14-201ENST00000516543 INSIG1O15503 277 aa2.98□□□□□ -1.93
SNORA40.14-201ENST00000516543 TJP3O95049 919 aa2.98□□□□□ -1.93
SNORA40.14-201ENST00000516543 SNHG28P0DPA3 235 aa2.98□□□□□ -1.93
SNORA40.14-201ENST00000516543 UCP3P55916 312 aa2.98□□□□□ -1.93
SNORA40.14-201ENST00000516543 TPTEP56180 551 aa2.98□□□□□ -1.93
SNORA40.14-201ENST00000516543 PSG6Q00889 435 aa2.98□□□□□ -1.93
SNORA40.14-201ENST00000516543 E2F1Q01094 437 aa2.98□□□□□ -1.93
SNORA40.14-201ENST00000516543 MYO1EQ12965 1108 aa2.98□□□□□ -1.93
SNORA40.14-201ENST00000516543 RAPGEF1Q13905 1077 aa2.98□□□□□ -1.93
SNORA40.14-201ENST00000516543 PGS1Q32NB8 556 aa2.98□□□□□ -1.93
SNORA40.14-201ENST00000516543 THEMIS2Q5TEJ8 643 aa2.98□□□□□ -1.93
SNORA40.14-201ENST00000516543 SERPINA13PQ6UXR4 307 aa2.98□□□□□ -1.93
SNORA40.14-201ENST00000516543 ZDHHC17Q8IUH5 632 aa2.98□□□□□ -1.93
SNORA40.14-201ENST00000516543 GALNT4Q8N4A0 578 aa2.98□□□□□ -1.93
SNORA40.14-201ENST00000516543 BRIX1Q8TDN6 353 aaKnown RBP2.98□□□□□ -1.93
SNORA40.14-201ENST00000516543 SNX18Q96RF0 628 aa2.98□□□□□ -1.93
SNORA40.14-201ENST00000516543 PRR25Q96S07 402 aa2.98□□□□□ -1.93
SNORA40.14-201ENST00000516543 TMEM79Q9BSE2 394 aa2.98□□□□□ -1.93
SNORA40.14-201ENST00000516543 ASPSCR1Q9BZE9 553 aa2.98□□□□□ -1.93
SNORA40.14-201ENST00000516543 ARMT1Q9H993 441 aa2.98□□□□□ -1.93
SNORA40.14-201ENST00000516543 LPAR3Q9UBY5 353 aa2.98□□□□□ -1.93
SNORA40.14-201ENST00000516543 PLEKHM1Q9Y4G2 1056 aa2.98□□□□□ -1.93
SNORA40.14-201ENST00000516543 SNX14Q9Y5W7 946 aa2.98□□□□□ -1.93
SNORA40.14-201ENST00000516543 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP2.98□□□□□ -1.93
SNORA40.14-201ENST00000516543 CNTNAP2Q9UHC6 1331 aa2.97□□□□□ -1.93
SNORA40.14-201ENST00000516543 H3BNC9 293 aa2.97□□□□□ -1.93
SNORA40.14-201ENST00000516543 FGBP02675 491 aa2.97□□□□□ -1.93
SNORA40.14-201ENST00000516543 ALDH2P05091 517 aa2.97□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms