RNA–Protein interactions for RNA: ENST00000516009.1

SCARNA20.1-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 138 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.1-201ENST00000516009 PCDHA3Q9Y5H8 950 aa8.06□□□□□ -1.12
SCARNA20.1-201ENST00000516009 NLRC5Q86WI3 1866 aa8.06□□□□□ -1.12
SCARNA20.1-201ENST00000516009 VWA8A3KMH1 1905 aa8.05□□□□□ -1.12
SCARNA20.1-201ENST00000516009 TBKBP1A7MCY6 615 aa8.05□□□□□ -1.12
SCARNA20.1-201ENST00000516009 E5RJQ4 531 aa8.05□□□□□ -1.12
SCARNA20.1-201ENST00000516009 PGRMC1O00264 195 aaKnown RBP8.05□□□□□ -1.12
SCARNA20.1-201ENST00000516009 TULP2O00295 520 aa8.05□□□□□ -1.12
SCARNA20.1-201ENST00000516009 PIK3R2O00459 728 aa8.05□□□□□ -1.12
SCARNA20.1-201ENST00000516009 XPO1O14980 1071 aaKnown RBP8.05□□□□□ -1.12
SCARNA20.1-201ENST00000516009 KIAA0355O15063 1070 aa8.05□□□□□ -1.12
SCARNA20.1-201ENST00000516009 TADA2AO75478 443 aa8.05□□□□□ -1.12
SCARNA20.1-201ENST00000516009 TIMP1P01033 207 aa8.05□□□□□ -1.12
SCARNA20.1-201ENST00000516009 ITGB1P05556 798 aa8.05□□□□□ -1.12
SCARNA20.1-201ENST00000516009 RAG1P15918 1043 aa8.05□□□□□ -1.12
SCARNA20.1-201ENST00000516009 ACADSBP45954 432 aa8.05□□□□□ -1.12
SCARNA20.1-201ENST00000516009 PLCB3Q01970 1234 aa8.05□□□□□ -1.12
SCARNA20.1-201ENST00000516009 YWHAHQ04917 246 aaPredicted RBP8.05□□□□□ -1.12
SCARNA20.1-201ENST00000516009 ITIH3Q06033 890 aa8.05□□□□□ -1.12
SCARNA20.1-201ENST00000516009 PIGHQ14442 188 aaPredicted RBP8.05□□□□□ -1.12
SCARNA20.1-201ENST00000516009 NAA30Q147X3 362 aaPredicted RBP8.05□□□□□ -1.12
SCARNA20.1-201ENST00000516009 ELF2Q15723 593 aa8.05□□□□□ -1.12
SCARNA20.1-201ENST00000516009 CLUL1Q15846 466 aa8.05□□□□□ -1.12
SCARNA20.1-201ENST00000516009 FAM102AQ5T9C2 384 aaPredicted RBP8.05□□□□□ -1.12
SCARNA20.1-201ENST00000516009 OVOS1Q6IE37 1185 aa8.05□□□□□ -1.12
SCARNA20.1-201ENST00000516009 CCDC70Q6NSX1 233 aa8.05□□□□□ -1.12
SCARNA20.1-201ENST00000516009 PMF1Q6P1K2 205 aa8.05□□□□□ -1.12
SCARNA20.1-201ENST00000516009 FAM183BPQ6ZVS7 135 aa8.05□□□□□ -1.12
SCARNA20.1-201ENST00000516009 RSRC2Q7L4I2 434 aaKnown RBP8.05□□□□□ -1.12
SCARNA20.1-201ENST00000516009 TMEM110Q86TL2 294 aa8.05□□□□□ -1.12
SCARNA20.1-201ENST00000516009 CPNE8Q86YQ8 564 aa8.05□□□□□ -1.12
SCARNA20.1-201ENST00000516009 ZDHHC17Q8IUH5 632 aa8.05□□□□□ -1.12
SCARNA20.1-201ENST00000516009 LRRC43Q8N309 656 aa8.05□□□□□ -1.12
SCARNA20.1-201ENST00000516009 SPATA4Q8NEY3 305 aa8.05□□□□□ -1.12
SCARNA20.1-201ENST00000516009 MYCBPAPQ8TBZ2 947 aa8.05□□□□□ -1.12
SCARNA20.1-201ENST00000516009 ACTRT1Q8TDG2 376 aa8.05□□□□□ -1.12
SCARNA20.1-201ENST00000516009 KRT35Q92764 455 aa8.05□□□□□ -1.12
SCARNA20.1-201ENST00000516009 CD101Q93033 1021 aa8.05□□□□□ -1.12
SCARNA20.1-201ENST00000516009 HSFY1Q96LI6 401 aa8.05□□□□□ -1.12
SCARNA20.1-201ENST00000516009 NAP1L3Q99457 506 aaPredicted RBP8.05□□□□□ -1.12
SCARNA20.1-201ENST00000516009 ACBD6Q9BR61 282 aa8.05□□□□□ -1.12
SCARNA20.1-201ENST00000516009 TMEM175Q9BSA9 504 aa8.05□□□□□ -1.12
SCARNA20.1-201ENST00000516009 DUSP16Q9BY84 665 aa8.05□□□□□ -1.12
SCARNA20.1-201ENST00000516009 B3GNT5Q9BYG0 378 aa8.05□□□□□ -1.12
SCARNA20.1-201ENST00000516009 NRDE2Q9H7Z3 1164 aa8.05□□□□□ -1.12
SCARNA20.1-201ENST00000516009 CRTAC1Q9NQ79 661 aa8.05□□□□□ -1.12
SCARNA20.1-201ENST00000516009 EHD2Q9NZN4 543 aa8.05□□□□□ -1.12
SCARNA20.1-201ENST00000516009 DNAJB4Q9UDY4 337 aa8.05□□□□□ -1.12
SCARNA20.1-201ENST00000516009 PATJQ8NI35 1801 aa8.05□□□□□ -1.12
SCARNA20.1-201ENST00000516009 ALPK3Q96L96 1907 aa8.04□□□□□ -1.12
SCARNA20.1-201ENST00000516009 ABHD14A-ACY1A0A1B0GW23 586 aa8.04□□□□□ -1.12
SCARNA20.1-201ENST00000516009 MYBPHLA2RUH7 354 aa8.04□□□□□ -1.12
SCARNA20.1-201ENST00000516009 F8W810 466 aa8.04□□□□□ -1.12
SCARNA20.1-201ENST00000516009 CLDN5O00501 218 aa8.04□□□□□ -1.12
SCARNA20.1-201ENST00000516009 NRP1O14786 923 aa8.04□□□□□ -1.12
SCARNA20.1-201ENST00000516009 SYN3O14994 580 aa8.04□□□□□ -1.12
SCARNA20.1-201ENST00000516009 PSTPIP1O43586 416 aa8.04□□□□□ -1.12
SCARNA20.1-201ENST00000516009 EFCAB14O75071 495 aa8.04□□□□□ -1.12
SCARNA20.1-201ENST00000516009 UPP2O95045 317 aa8.04□□□□□ -1.12
SCARNA20.1-201ENST00000516009 ALDH2P05091 517 aa8.04□□□□□ -1.12
SCARNA20.1-201ENST00000516009 FAM200BP0CF97 657 aa8.04□□□□□ -1.12
SCARNA20.1-201ENST00000516009 NPR3P17342 541 aa8.04□□□□□ -1.12
SCARNA20.1-201ENST00000516009 PSMA2P25787 234 aa8.04□□□□□ -1.12
SCARNA20.1-201ENST00000516009 TKTP29401 623 aaKnown RBP8.04□□□□□ -1.12
SCARNA20.1-201ENST00000516009 RFC1P35251 1148 aaPredicted RBP8.04□□□□□ -1.12
SCARNA20.1-201ENST00000516009 SSR1P43307 286 aaKnown RBP8.04□□□□□ -1.12
SCARNA20.1-201ENST00000516009 PLA2G4AP47712 749 aa8.04□□□□□ -1.12
SCARNA20.1-201ENST00000516009 MARCKSL1P49006 195 aa8.04□□□□□ -1.12
SCARNA20.1-201ENST00000516009 PEX5P50542 639 aa8.04□□□□□ -1.12
SCARNA20.1-201ENST00000516009 RWDD2BP57060 319 aa8.04□□□□□ -1.12
SCARNA20.1-201ENST00000516009 RNASE9P60153 205 aaKnown RBP8.04□□□□□ -1.12
SCARNA20.1-201ENST00000516009 TSPY1Q01534 308 aa8.04□□□□□ -1.12
SCARNA20.1-201ENST00000516009 SLC6A3Q01959 620 aa8.04□□□□□ -1.12
SCARNA20.1-201ENST00000516009 OGDHQ02218 1023 aa8.04□□□□□ -1.12
SCARNA20.1-201ENST00000516009 C2orf54Q08AI8 447 aa8.04□□□□□ -1.12
SCARNA20.1-201ENST00000516009 ZNF252P-AS1Q0IIN9 211 aa8.04□□□□□ -1.12
SCARNA20.1-201ENST00000516009 MAPRE1Q15691 268 aaKnown RBP8.04□□□□□ -1.12
SCARNA20.1-201ENST00000516009 CCDC142Q17RM4 750 aa8.04□□□□□ -1.12
SCARNA20.1-201ENST00000516009 INTS6LQ5JSJ4 861 aaKnown RBP8.04□□□□□ -1.12
SCARNA20.1-201ENST00000516009 SEL1L2Q5TEA6 688 aa8.04□□□□□ -1.12
SCARNA20.1-201ENST00000516009 DCAF12L1Q5VU92 463 aa8.04□□□□□ -1.12
SCARNA20.1-201ENST00000516009 KIAA0319Q5VV43 1072 aa8.04□□□□□ -1.12
SCARNA20.1-201ENST00000516009 MFSD5Q6N075 450 aa8.04□□□□□ -1.12
SCARNA20.1-201ENST00000516009 CC2D1AQ6P1N0 951 aaPredicted RBP8.04□□□□□ -1.12
SCARNA20.1-201ENST00000516009 LIN28BQ6ZN17 250 aaKnown RBP eCLIP8.04□□□□□ -1.12
SCARNA20.1-201ENST00000516009 FAM35AQ86V20 835 aa8.04□□□□□ -1.12
SCARNA20.1-201ENST00000516009 PIGZQ86VD9 579 aa8.04□□□□□ -1.12
SCARNA20.1-201ENST00000516009 RHOT1Q8IXI2 618 aa8.04□□□□□ -1.12
SCARNA20.1-201ENST00000516009 CRIPAKQ8N1N5 446 aa8.04□□□□□ -1.12
SCARNA20.1-201ENST00000516009 RASGEF1CQ8N431 466 aa8.04□□□□□ -1.12
SCARNA20.1-201ENST00000516009 TMEM199Q8N511 208 aa8.04□□□□□ -1.12
SCARNA20.1-201ENST00000516009 GPR161Q8N6U8 529 aaKnown RBP8.04□□□□□ -1.12
SCARNA20.1-201ENST00000516009 NIPA2Q8N8Q9 360 aa8.04□□□□□ -1.12
SCARNA20.1-201ENST00000516009 NOA1Q8NC60 698 aaKnown RBP8.04□□□□□ -1.12
SCARNA20.1-201ENST00000516009 JOSD2Q8TAC2 188 aa8.04□□□□□ -1.12
SCARNA20.1-201ENST00000516009 FNIP1Q8TF40 1166 aa8.04□□□□□ -1.12
SCARNA20.1-201ENST00000516009 TSC1Q92574 1164 aa8.04□□□□□ -1.12
SCARNA20.1-201ENST00000516009 ALG3Q92685 438 aa8.04□□□□□ -1.12
SCARNA20.1-201ENST00000516009 MYLPFQ96A32 169 aa8.04□□□□□ -1.12
SCARNA20.1-201ENST00000516009 SMARCD1Q96GM5 515 aa8.04□□□□□ -1.12
SCARNA20.1-201ENST00000516009 PCED1BQ96HM7 432 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms