RNA–Protein interactions for RNA: ENST00000515620.5

CLDND1-231, Transcript of claudin domain containing 1, human

TSL 3

Gene CLDND1, Length 663 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CLDND1-231	ENST00000515620	BYSL	Q13895	437 aa	Known RBP	11.32	□□□□□ -0.6
CLDND1-231	ENST00000515620	SPDYC	Q5MJ68	293 aa		11.32	□□□□□ -0.6
CLDND1-231	ENST00000515620	WSCD1	Q658N2	575 aa		11.32	□□□□□ -0.6
CLDND1-231	ENST00000515620	NAXD	Q8IW45	347 aa		11.32	□□□□□ -0.6
CLDND1-231	ENST00000515620	DCP1B	Q8IZD4	617 aa	Known RBP	11.32	□□□□□ -0.6
CLDND1-231	ENST00000515620	ARL14EP	Q8N8R7	260 aa	Predicted RBP	11.32	□□□□□ -0.6
CLDND1-231	ENST00000515620	SPRYD3	Q8NCJ5	442 aa		11.32	□□□□□ -0.6
CLDND1-231	ENST00000515620	TMEM161B	Q8NDZ6	487 aa		11.32	□□□□□ -0.6
CLDND1-231	ENST00000515620	CRELD1	Q96HD1	420 aa		11.32	□□□□□ -0.6
CLDND1-231	ENST00000515620	RPF1	Q9H9Y2	349 aa	Known RBP	11.32	□□□□□ -0.6
CLDND1-231	ENST00000515620	C17orf75	Q9HAS0	396 aa		11.32	□□□□□ -0.6
CLDND1-231	ENST00000515620	POLM	Q9NP87	494 aa	Predicted RBP	11.32	□□□□□ -0.6
CLDND1-231	ENST00000515620	ZDHHC4	Q9NPG8	344 aa		11.32	□□□□□ -0.6
CLDND1-231	ENST00000515620	CACNA2D2	Q9NY47	1150 aa		11.32	□□□□□ -0.6
CLDND1-231	ENST00000515620	LRWD1	Q9UFC0	647 aa		11.32	□□□□□ -0.6
CLDND1-231	ENST00000515620	ADAMTS9	Q9P2N4	1935 aa		11.32	□□□□□ -0.6
CLDND1-231	ENST00000515620	C2orf78	A6NCI8	922 aa		11.31	□□□□□ -0.6
CLDND1-231	ENST00000515620	PAX3	P23760	479 aa		11.31	□□□□□ -0.6
CLDND1-231	ENST00000515620	C19orf57	Q0VDD7	668 aa		11.31	□□□□□ -0.6
CLDND1-231	ENST00000515620	KCNB1	Q14721	858 aa		11.31	□□□□□ -0.6
CLDND1-231	ENST00000515620	TMEM132D	Q14C87	1099 aa		11.31	□□□□□ -0.6
CLDND1-231	ENST00000515620	SAFB	Q15424	915 aa	Known RBP eCLIP	11.31	□□□□□ -0.6
CLDND1-231	ENST00000515620	DDR2	Q16832	855 aa		11.31	□□□□□ -0.6
CLDND1-231	ENST00000515620	GAB4	Q2WGN9	574 aa		11.31	□□□□□ -0.6
CLDND1-231	ENST00000515620	EOGT	Q5NDL2	527 aa		11.31	□□□□□ -0.6
CLDND1-231	ENST00000515620	RINT1	Q6NUQ1	792 aa		11.31	□□□□□ -0.6
CLDND1-231	ENST00000515620	C1orf186	Q6ZWK4	172 aa		11.31	□□□□□ -0.6
CLDND1-231	ENST00000515620	RABEPK	Q7Z6M1	372 aa		11.31	□□□□□ -0.6
CLDND1-231	ENST00000515620	NECAB1	Q8N987	351 aa		11.31	□□□□□ -0.6
CLDND1-231	ENST00000515620	SPIRE2	Q8WWL2	714 aa		11.31	□□□□□ -0.6
CLDND1-231	ENST00000515620	TMLHE	Q9NVH6	421 aa		11.31	□□□□□ -0.6
CLDND1-231	ENST00000515620	DNAAF2	Q9NVR5	837 aa	Known RBP	11.31	□□□□□ -0.6
CLDND1-231	ENST00000515620	DNM3	Q9UQ16	869 aa		11.31	□□□□□ -0.6
CLDND1-231	ENST00000515620	APOBEC2	Q9Y235	224 aa	Known RBP	11.31	□□□□□ -0.6
CLDND1-231	ENST00000515620	ANK1	P16157	1881 aa		11.31	□□□□□ -0.6
CLDND1-231	ENST00000515620	GON4L	Q3T8J9	2241 aa		11.31	□□□□□ -0.6
CLDND1-231	ENST00000515620	PI4KA	P42356	2102 aa		11.3	□□□□□ -0.6
CLDND1-231	ENST00000515620	ANO9	A1A5B4	782 aa		11.3	□□□□□ -0.6
CLDND1-231	ENST00000515620	MYMK	A6NI61	221 aa		11.3	□□□□□ -0.6
CLDND1-231	ENST00000515620	PIR	O00625	290 aa		11.3	□□□□□ -0.6
CLDND1-231	ENST00000515620	HNRNPDL	O14979	420 aa	Known RBP	11.3	□□□□□ -0.6
CLDND1-231	ENST00000515620	OGT	O15294	1046 aa		11.3	□□□□□ -0.6
CLDND1-231	ENST00000515620	FAM189A1	O60320	539 aa		11.3	□□□□□ -0.6
CLDND1-231	ENST00000515620	ADAM23	O75077	832 aa		11.3	□□□□□ -0.6
CLDND1-231	ENST00000515620	NOL4	O94818	638 aa		11.3	□□□□□ -0.6
CLDND1-231	ENST00000515620	CYP17A1	P05093	508 aa		11.3	□□□□□ -0.6
CLDND1-231	ENST00000515620	SYP	P08247	313 aa		11.3	□□□□□ -0.6
CLDND1-231	ENST00000515620	CHRM1	P11229	460 aa	Predicted RBP	11.3	□□□□□ -0.6
CLDND1-231	ENST00000515620	PLS3	P13797	630 aa		11.3	□□□□□ -0.6
CLDND1-231	ENST00000515620	TAF6	P49848	677 aa		11.3	□□□□□ -0.6
CLDND1-231	ENST00000515620	LIG4	P49917	911 aa		11.3	□□□□□ -0.6
CLDND1-231	ENST00000515620	SMTN	P53814	917 aa		11.3	□□□□□ -0.6
CLDND1-231	ENST00000515620	TSPY1	Q01534	308 aa		11.3	□□□□□ -0.6
CLDND1-231	ENST00000515620	GUCY1B3	Q02153	619 aa		11.3	□□□□□ -0.6
CLDND1-231	ENST00000515620	KDSR	Q06136	332 aa		11.3	□□□□□ -0.6
CLDND1-231	ENST00000515620	ZNF33A	Q06730	810 aa		11.3	□□□□□ -0.6
CLDND1-231	ENST00000515620	ORC2	Q13416	577 aa	Predicted RBP	11.3	□□□□□ -0.6
CLDND1-231	ENST00000515620	NBR1	Q14596	966 aa		11.3	□□□□□ -0.6
CLDND1-231	ENST00000515620	KYAT1	Q16773	422 aa		11.3	□□□□□ -0.6
CLDND1-231	ENST00000515620	HSF5	Q4G112	596 aa	Predicted RBP	11.3	□□□□□ -0.6
CLDND1-231	ENST00000515620	EMC10	Q5UCC4	262 aa		11.3	□□□□□ -0.6
CLDND1-231	ENST00000515620	KCNK18	Q7Z418	384 aa		11.3	□□□□□ -0.6
CLDND1-231	ENST00000515620	NSUN7	Q8NE18	718 aa	Known RBP	11.3	□□□□□ -0.6
CLDND1-231	ENST00000515620	SPATA18	Q8TC71	538 aa		11.3	□□□□□ -0.6
CLDND1-231	ENST00000515620	TRMT2B	Q96GJ1	504 aa	Known RBP	11.3	□□□□□ -0.6
CLDND1-231	ENST00000515620	TSPAN18	Q96SJ8	248 aa		11.3	□□□□□ -0.6
CLDND1-231	ENST00000515620	NTPCR	Q9BSD7	190 aa	Known RBP	11.3	□□□□□ -0.6
CLDND1-231	ENST00000515620	GCNT4	Q9P109	453 aa		11.3	□□□□□ -0.6
CLDND1-231	ENST00000515620	PLXND1	Q9Y4D7	1925 aa		11.29	□□□□□ -0.6
CLDND1-231	ENST00000515620	PP2D1	A8MPX8	630 aa		11.29	□□□□□ -0.6
CLDND1-231	ENST00000515620	SCAMP3	O14828	347 aa	Known RBP	11.29	□□□□□ -0.6
CLDND1-231	ENST00000515620	JAK2	O60674	1132 aa		11.29	□□□□□ -0.6
CLDND1-231	ENST00000515620	GJB3	O75712	270 aa		11.29	□□□□□ -0.6
CLDND1-231	ENST00000515620	KAT7	O95251	611 aa		11.29	□□□□□ -0.6
CLDND1-231	ENST00000515620	APOD	P05090	189 aa		11.29	□□□□□ -0.6
CLDND1-231	ENST00000515620	ADRB2	P07550	413 aa		11.29	□□□□□ -0.6
CLDND1-231	ENST00000515620	CYP2F1	P24903	491 aa		11.29	□□□□□ -0.6
CLDND1-231	ENST00000515620	GUCY2C	P25092	1073 aa		11.29	□□□□□ -0.6
CLDND1-231	ENST00000515620	SLC6A11	P48066	632 aa		11.29	□□□□□ -0.6
CLDND1-231	ENST00000515620	RPL10A	P62906	217 aa	Known RBP	11.29	□□□□□ -0.6
CLDND1-231	ENST00000515620	REST	Q13127	1097 aa		11.29	□□□□□ -0.6
CLDND1-231	ENST00000515620	SLC14A1	Q13336	389 aa		11.29	□□□□□ -0.6
CLDND1-231	ENST00000515620	TTC38	Q5R3I4	469 aa		11.29	□□□□□ -0.6
CLDND1-231	ENST00000515620	SLC36A4	Q6YBV0	504 aa		11.29	□□□□□ -0.6
CLDND1-231	ENST00000515620	TOGARAM2	Q6ZUX3	1019 aa		11.29	□□□□□ -0.6
CLDND1-231	ENST00000515620	FILIP1	Q7Z7B0	1213 aa		11.29	□□□□□ -0.6
CLDND1-231	ENST00000515620	C12orf40	Q86WS4	652 aa		11.29	□□□□□ -0.6
CLDND1-231	ENST00000515620	SLC41A1	Q8IVJ1	513 aa		11.29	□□□□□ -0.6
CLDND1-231	ENST00000515620	FSIP1	Q8NA03	581 aa		11.29	□□□□□ -0.6
CLDND1-231	ENST00000515620	HSPA12B	Q96MM6	686 aa		11.29	□□□□□ -0.6
CLDND1-231	ENST00000515620	PNKP	Q96T60	521 aa		11.29	□□□□□ -0.6
CLDND1-231	ENST00000515620	MSTO1	Q9BUK6	570 aa		11.29	□□□□□ -0.6
CLDND1-231	ENST00000515620	TIPIN	Q9BVW5	301 aa		11.29	□□□□□ -0.6
CLDND1-231	ENST00000515620	CALCOCO1	Q9P1Z2	691 aa		11.29	□□□□□ -0.6
CLDND1-231	ENST00000515620	ARHGAP26	Q9UNA1	814 aa		11.29	□□□□□ -0.6
CLDND1-231	ENST00000515620		A0A1W2PQD8	194 aa		11.28	□□□□□ -0.6
CLDND1-231	ENST00000515620	LEFTY2	O00292	366 aa		11.28	□□□□□ -0.6
CLDND1-231	ENST00000515620	C1QL1	O75973	258 aa		11.28	□□□□□ -0.6
CLDND1-231	ENST00000515620	TCF3	P15923	654 aa		11.28	□□□□□ -0.6
CLDND1-231	ENST00000515620	GABRG2	P18507	467 aa		11.28	□□□□□ -0.6

Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms