RNA–Protein interactions for RNA: ENST00000514421.1

CCL28-204, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 3

Gene CCL28, Length 577 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-204ENST00000514421 EHBP1Q8NDI1 1231 aa8.86□□□□□ -0.99
CCL28-204ENST00000514421 MYCBPAPQ8TBZ2 947 aa8.86□□□□□ -0.99
CCL28-204ENST00000514421 SEMA4DQ92854 862 aa8.86□□□□□ -0.99
CCL28-204ENST00000514421 C16orf45Q96MC5 204 aaPredicted RBP8.86□□□□□ -0.99
CCL28-204ENST00000514421 PKMYT1Q99640 499 aa8.86□□□□□ -0.99
CCL28-204ENST00000514421 SYT15Q9BQS2 421 aa8.86□□□□□ -0.99
CCL28-204ENST00000514421 PI4K2AQ9BTU6 479 aa8.86□□□□□ -0.99
CCL28-204ENST00000514421 CRISPLD1Q9H336 500 aa8.86□□□□□ -0.99
CCL28-204ENST00000514421 APOBEC3GQ9HC16 384 aaKnown RBP8.86□□□□□ -0.99
CCL28-204ENST00000514421 ABCB6Q9NP58 842 aa8.86□□□□□ -0.99
CCL28-204ENST00000514421 CD320Q9NPF0 282 aa8.86□□□□□ -0.99
CCL28-204ENST00000514421 AVENQ9NQS1 362 aaPredicted RBP8.86□□□□□ -0.99
CCL28-204ENST00000514421 TMLHEQ9NVH6 421 aa8.86□□□□□ -0.99
CCL28-204ENST00000514421 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.86□□□□□ -0.99
CCL28-204ENST00000514421 CEP72Q9P209 647 aa8.86□□□□□ -0.99
CCL28-204ENST00000514421 DNMT3BQ9UBC3 853 aaKnown RBP8.86□□□□□ -0.99
CCL28-204ENST00000514421 LUC7L2Q9Y383 392 aaKnown RBP8.86□□□□□ -0.99
CCL28-204ENST00000514421 UTP18Q9Y5J1 556 aaKnown RBP eCLIP8.86□□□□□ -0.99
CCL28-204ENST00000514421 ADGRG1Q9Y653 693 aa8.86□□□□□ -0.99
CCL28-204ENST00000514421 VWA8A3KMH1 1905 aa8.86□□□□□ -0.99
CCL28-204ENST00000514421 TCF20Q9UGU0 1960 aaKnown RBP8.85□□□□□ -0.99
CCL28-204ENST00000514421 ZNF197O14709 1029 aa8.85□□□□□ -0.99
CCL28-204ENST00000514421 CTIFO43310 598 aaKnown RBP8.85□□□□□ -0.99
CCL28-204ENST00000514421 ATP2C2O75185 946 aa8.85□□□□□ -0.99
CCL28-204ENST00000514421 LRRN2O75325 713 aa8.85□□□□□ -0.99
CCL28-204ENST00000514421 MICAL2O94851 1124 aa8.85□□□□□ -0.99
CCL28-204ENST00000514421 AFPP02771 609 aaKnown RBP8.85□□□□□ -0.99
CCL28-204ENST00000514421 FSHRP23945 695 aa8.85□□□□□ -0.99
CCL28-204ENST00000514421 KRT9P35527 623 aa8.85□□□□□ -0.99
CCL28-204ENST00000514421 ETF1P62495 437 aaKnown RBP8.85□□□□□ -0.99
CCL28-204ENST00000514421 RPL10AP62906 217 aaKnown RBP8.85□□□□□ -0.99
CCL28-204ENST00000514421 NOP14P78316 857 aaKnown RBP8.85□□□□□ -0.99
CCL28-204ENST00000514421 GOLGA8FQ08AF8 430 aa8.85□□□□□ -0.99
CCL28-204ENST00000514421 GOLGA8DPQ0D2H9 430 aa8.85□□□□□ -0.99
CCL28-204ENST00000514421 KCNH2Q12809 1159 aa8.85□□□□□ -0.99
CCL28-204ENST00000514421 SYCP1Q15431 976 aa8.85□□□□□ -0.99
CCL28-204ENST00000514421 MGAT5BQ3V5L5 792 aa8.85□□□□□ -0.99
CCL28-204ENST00000514421 CFAP221Q4G0U5 840 aa8.85□□□□□ -0.99
CCL28-204ENST00000514421 CBWD6Q4V339 395 aa8.85□□□□□ -0.99
CCL28-204ENST00000514421 PABPC1LQ4VXU2 614 aaKnown RBP8.85□□□□□ -0.99
CCL28-204ENST00000514421 CBWD3Q5JTY5 395 aa8.85□□□□□ -0.99
CCL28-204ENST00000514421 CBWD5Q5RIA9 395 aa8.85□□□□□ -0.99
CCL28-204ENST00000514421 ASTLQ6HA08 431 aaPredicted RBP8.85□□□□□ -0.99
CCL28-204ENST00000514421 RAD9BQ6WBX8 426 aa8.85□□□□□ -0.99
CCL28-204ENST00000514421 DNAJB7Q7Z6W7 309 aaPredicted RBP8.85□□□□□ -0.99
CCL28-204ENST00000514421 ITIH5Q86UX2 942 aa8.85□□□□□ -0.99
CCL28-204ENST00000514421 ZDHHC14Q8IZN3 488 aa8.85□□□□□ -0.99
CCL28-204ENST00000514421 CRYBG2Q8N1P7 616 aa8.85□□□□□ -0.99
CCL28-204ENST00000514421 LEMD2Q8NC56 503 aa8.85□□□□□ -0.99
CCL28-204ENST00000514421 SYN2Q92777 582 aaPredicted RBP8.85□□□□□ -0.99
CCL28-204ENST00000514421 TATDN2Q93075 761 aa8.85□□□□□ -0.99
CCL28-204ENST00000514421 ELMO3Q96BJ8 720 aa8.85□□□□□ -0.99
CCL28-204ENST00000514421 FUBP3Q96I24 572 aaKnown RBP eCLIP8.85□□□□□ -0.99
CCL28-204ENST00000514421 TNIP3Q96KP6 325 aa8.85□□□□□ -0.99
CCL28-204ENST00000514421 SEPT5Q99719 369 aaPredicted RBP8.85□□□□□ -0.99
CCL28-204ENST00000514421 CORO1BQ9BR76 489 aa8.85□□□□□ -0.99
CCL28-204ENST00000514421 BCO2Q9BYV7 579 aa8.85□□□□□ -0.99
CCL28-204ENST00000514421 DNAI2Q9GZS0 605 aa8.85□□□□□ -0.99
CCL28-204ENST00000514421 SDCBP2Q9H190 292 aa8.85□□□□□ -0.99
CCL28-204ENST00000514421 FAM124BQ9H5Z6 455 aaPredicted RBP8.85□□□□□ -0.99
CCL28-204ENST00000514421 SMYD3Q9H7B4 428 aa8.85□□□□□ -0.99
CCL28-204ENST00000514421 L2HGDHQ9H9P8 463 aa8.85□□□□□ -0.99
CCL28-204ENST00000514421 CRTAC1Q9NQ79 661 aa8.85□□□□□ -0.99
CCL28-204ENST00000514421 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.85□□□□□ -0.99
CCL28-204ENST00000514421 ABI2Q9NYB9 513 aaPredicted RBP8.85□□□□□ -0.99
CCL28-204ENST00000514421 LIMD1Q9UGP4 676 aa8.85□□□□□ -0.99
CCL28-204ENST00000514421 MRPS23Q9Y3D9 190 aaKnown RBP8.85□□□□□ -0.99
CCL28-204ENST00000514421 YIPF1Q9Y548 306 aa8.85□□□□□ -0.99
CCL28-204ENST00000514421 ZFP37Q9Y6Q3 630 aaPredicted RBP8.85□□□□□ -0.99
CCL28-204ENST00000514421 ANK1P16157 1881 aa8.85□□□□□ -0.99
CCL28-204ENST00000514421 UNC80Q8N2C7 3258 aa8.85□□□□□ -0.99
CCL28-204ENST00000514421 XIRP2A4UGR9 3374 aa8.84□□□□□ -0.99
CCL28-204ENST00000514421 CLUHO75153 1309 aa8.84□□□□□ -0.99
CCL28-204ENST00000514421 GTPBP10A4D1E9 387 aaKnown RBP8.84□□□□□ -0.99
CCL28-204ENST00000514421 SOWAHDA6NJG2 315 aa8.84□□□□□ -0.99
CCL28-204ENST00000514421 C2CD4DB7Z1M9 353 aa8.84□□□□□ -0.99
CCL28-204ENST00000514421 TNFRSF10AO00220 468 aa8.84□□□□□ -0.99
CCL28-204ENST00000514421 DYNC1I1O14576 645 aa8.84□□□□□ -0.99
CCL28-204ENST00000514421 HCRTO43612 131 aa8.84□□□□□ -0.99
CCL28-204ENST00000514421 RHOP08100 348 aa8.84□□□□□ -0.99
CCL28-204ENST00000514421 CCDC175P0C221 793 aa8.84□□□□□ -0.99
CCL28-204ENST00000514421 TRIM21P19474 475 aaKnown RBP8.84□□□□□ -0.99
CCL28-204ENST00000514421 CYP2F1P24903 491 aa8.84□□□□□ -0.99
CCL28-204ENST00000514421 GBP2P32456 591 aaPredicted RBP8.84□□□□□ -0.99
CCL28-204ENST00000514421 MAGEA11P43364 429 aa8.84□□□□□ -0.99
CCL28-204ENST00000514421 ASPAP45381 313 aa8.84□□□□□ -0.99
CCL28-204ENST00000514421 RAP1GAPP47736 663 aa8.84□□□□□ -0.99
CCL28-204ENST00000514421 CDR1P51861 262 aa8.84□□□□□ -0.99
CCL28-204ENST00000514421 NDST1P52848 882 aa8.84□□□□□ -0.99
CCL28-204ENST00000514421 PSMC1P62191 440 aaKnown RBP8.84□□□□□ -0.99
CCL28-204ENST00000514421 NTHL1P78549 312 aa8.84□□□□□ -0.99
CCL28-204ENST00000514421 PDCD11Q14690 1871 aaKnown RBP8.84□□□□□ -0.99
CCL28-204ENST00000514421 VEPH1Q14D04 833 aa8.84□□□□□ -0.99
CCL28-204ENST00000514421 TAF12Q16514 161 aa8.84□□□□□ -0.99
CCL28-204ENST00000514421 MDH1BQ5I0G3 518 aa8.84□□□□□ -0.99
CCL28-204ENST00000514421 DNTTIP2Q5QJE6 756 aaKnown RBP8.84□□□□□ -0.99
CCL28-204ENST00000514421 DPY19L2P1Q6NXN4 242 aa8.84□□□□□ -0.99
CCL28-204ENST00000514421 VSTM1Q6UX27 236 aa8.84□□□□□ -0.99
CCL28-204ENST00000514421 SCARA5Q6ZMJ2 495 aa8.84□□□□□ -0.99
CCL28-204ENST00000514421 TOGARAM2Q6ZUX3 1019 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms