RNA–Protein interactions for RNA: ENST00000514110.5

SNHG4-208, Transcript of small nucleolar RNA host gene 4, humanhuman

TSL 1 (best)

Gene SNHG4, Length 679 nt, Biotype retained intron, Subcellular localisation Nucleoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG4-208ENST00000514110 MRPL45Q9BRJ2 306 aaKnown RBP13.07□□□□□ -0.32
SNHG4-208ENST00000514110 LRRC27Q9C0I9 530 aa13.07□□□□□ -0.32
SNHG4-208ENST00000514110 CUEDC2Q9H467 287 aa13.07□□□□□ -0.32
SNHG4-208ENST00000514110 SEMA4GQ9NTN9 838 aa13.07□□□□□ -0.32
SNHG4-208ENST00000514110 POLR3BQ9NW08 1133 aaPredicted RBP13.07□□□□□ -0.32
SNHG4-208ENST00000514110 GCNT4Q9P109 453 aa13.07□□□□□ -0.32
SNHG4-208ENST00000514110 MAGEC2Q9UBF1 373 aaPredicted RBP13.07□□□□□ -0.32
SNHG4-208ENST00000514110 CDH9Q9ULB4 789 aa13.07□□□□□ -0.32
SNHG4-208ENST00000514110 R3HCC1Q9Y3T6 440 aaKnown RBP13.07□□□□□ -0.32
SNHG4-208ENST00000514110 NME7Q9Y5B8 376 aa13.07□□□□□ -0.32
SNHG4-208ENST00000514110 GREB1Q4ZG55 1949 aa13.06□□□□□ -0.32
SNHG4-208ENST00000514110 TRAV19A0A0A6YYK7 116 aa13.06□□□□□ -0.32
SNHG4-208ENST00000514110 CLIC2O15247 247 aa13.06□□□□□ -0.32
SNHG4-208ENST00000514110 CUTAO60888 179 aa13.06□□□□□ -0.32
SNHG4-208ENST00000514110 LRP3O75074 770 aa13.06□□□□□ -0.32
SNHG4-208ENST00000514110 YEATS4O95619 227 aa13.06□□□□□ -0.32
SNHG4-208ENST00000514110 CST3P01034 146 aaPredicted RBP13.06□□□□□ -0.32
SNHG4-208ENST00000514110 CKMP06732 381 aa13.06□□□□□ -0.32
SNHG4-208ENST00000514110 PDGFRBP09619 1106 aa13.06□□□□□ -0.32
SNHG4-208ENST00000514110 USP17L7P0C7H9 530 aa13.06□□□□□ -0.32
SNHG4-208ENST00000514110 DLATP10515 647 aaKnown RBP13.06□□□□□ -0.32
SNHG4-208ENST00000514110 WARSP23381 471 aaKnown RBP13.06□□□□□ -0.32
SNHG4-208ENST00000514110 CASP1P29466 404 aa13.06□□□□□ -0.32
SNHG4-208ENST00000514110 GJA4P35212 333 aa13.06□□□□□ -0.32
SNHG4-208ENST00000514110 GALK1P51570 392 aa13.06□□□□□ -0.32
SNHG4-208ENST00000514110 USP46P62068 366 aa13.06□□□□□ -0.32
SNHG4-208ENST00000514110 AMPD3Q01432 767 aa13.06□□□□□ -0.32
SNHG4-208ENST00000514110 USP4Q13107 963 aa13.06□□□□□ -0.32
SNHG4-208ENST00000514110 PDGFRLQ15198 375 aa13.06□□□□□ -0.32
SNHG4-208ENST00000514110 SNRNP35Q16560 246 aaKnown RBP13.06□□□□□ -0.32
SNHG4-208ENST00000514110 FAM26FQ5R3K3 315 aa13.06□□□□□ -0.32
SNHG4-208ENST00000514110 CNNM4Q6P4Q7 775 aa13.06□□□□□ -0.32
SNHG4-208ENST00000514110 C4orf50Q6ZRC1 276 aa13.06□□□□□ -0.32
SNHG4-208ENST00000514110 CEP68Q76N32 757 aa13.06□□□□□ -0.32
SNHG4-208ENST00000514110 NELFCDQ8IXH7 590 aa13.06□□□□□ -0.32
SNHG4-208ENST00000514110 ARL14EPQ8N8R7 260 aaPredicted RBP13.06□□□□□ -0.32
SNHG4-208ENST00000514110 IQUBQ8NA54 791 aa13.06□□□□□ -0.32
SNHG4-208ENST00000514110 OSCP1Q8WVF1 389 aa13.06□□□□□ -0.32
SNHG4-208ENST00000514110 SPATA17Q96L03 361 aa13.06□□□□□ -0.32
SNHG4-208ENST00000514110 MMS19Q96T76 1030 aa13.06□□□□□ -0.32
SNHG4-208ENST00000514110 C7orf25Q9BPX7 421 aa13.06□□□□□ -0.32
SNHG4-208ENST00000514110 ECT2Q9H8V3 914 aa13.06□□□□□ -0.32
SNHG4-208ENST00000514110 KIAA1586Q9HCI6 787 aa13.06□□□□□ -0.32
SNHG4-208ENST00000514110 AGPAT3Q9NRZ7 376 aa13.06□□□□□ -0.32
SNHG4-208ENST00000514110 DUS2Q9NX74 493 aaKnown RBP13.06□□□□□ -0.32
SNHG4-208ENST00000514110 WNT6Q9Y6F9 365 aa13.06□□□□□ -0.32
SNHG4-208ENST00000514110 ANAPC1Q9H1A4 1944 aa13.05□□□□□ -0.32
SNHG4-208ENST00000514110 RNF40O75150 1001 aa13.05□□□□□ -0.32
SNHG4-208ENST00000514110 PRKCSHP14314 528 aaPredicted RBP13.05□□□□□ -0.32
SNHG4-208ENST00000514110 TNNI1P19237 187 aa13.05□□□□□ -0.32
SNHG4-208ENST00000514110 GRIK1P39086 918 aa13.05□□□□□ -0.32
SNHG4-208ENST00000514110 CYP2J2P51589 502 aa13.05□□□□□ -0.32
SNHG4-208ENST00000514110 AMPD2Q01433 879 aa13.05□□□□□ -0.32
SNHG4-208ENST00000514110 CYP27A1Q02318 531 aa13.05□□□□□ -0.32
SNHG4-208ENST00000514110 CYP24A1Q07973 514 aa13.05□□□□□ -0.32
SNHG4-208ENST00000514110 EHHADHQ08426 723 aa13.05□□□□□ -0.32
SNHG4-208ENST00000514110 CSRP2Q16527 193 aa13.05□□□□□ -0.32
SNHG4-208ENST00000514110 EML3Q32P44 896 aa13.05□□□□□ -0.32
SNHG4-208ENST00000514110 FOXD4L6Q3SYB3 417 aaPredicted RBP13.05□□□□□ -0.32
SNHG4-208ENST00000514110 FOXD4L3Q6VB84 417 aaPredicted RBP13.05□□□□□ -0.32
SNHG4-208ENST00000514110 PRR23CQ6ZRP0 262 aa13.05□□□□□ -0.32
SNHG4-208ENST00000514110 UNC13DQ70J99 1090 aa13.05□□□□□ -0.32
SNHG4-208ENST00000514110 CPA6Q8N4T0 437 aa13.05□□□□□ -0.32
SNHG4-208ENST00000514110 FSIP1Q8NA03 581 aa13.05□□□□□ -0.32
SNHG4-208ENST00000514110 MYCBPAPQ8TBZ2 947 aa13.05□□□□□ -0.32
SNHG4-208ENST00000514110 SH3RF2Q8TEC5 729 aa13.05□□□□□ -0.32
SNHG4-208ENST00000514110 SCFD1Q8WVM8 642 aa13.05□□□□□ -0.32
SNHG4-208ENST00000514110 ZNF516Q92618 1163 aa13.05□□□□□ -0.32
SNHG4-208ENST00000514110 EZH1Q92800 747 aaPredicted RBP13.05□□□□□ -0.32
SNHG4-208ENST00000514110 CCDC127Q96BQ5 260 aa13.05□□□□□ -0.32
SNHG4-208ENST00000514110 PCED1BQ96HM7 432 aa13.05□□□□□ -0.32
SNHG4-208ENST00000514110 CGRRF1Q99675 332 aa13.05□□□□□ -0.32
SNHG4-208ENST00000514110 P2RY13Q9BPV8 354 aa13.05□□□□□ -0.32
SNHG4-208ENST00000514110 RTKNQ9BST9 563 aa13.05□□□□□ -0.32
SNHG4-208ENST00000514110 GZF1Q9H116 711 aaPredicted RBP13.05□□□□□ -0.32
SNHG4-208ENST00000514110 BLZF1Q9H2G9 400 aa13.05□□□□□ -0.32
SNHG4-208ENST00000514110 SLC8A2Q9UPR5 921 aa13.05□□□□□ -0.32
SNHG4-208ENST00000514110 PTPRDP23468 1912 aa13.05□□□□□ -0.32
SNHG4-208ENST00000514110 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.04□□□□□ -0.32
SNHG4-208ENST00000514110 POLR2DO15514 142 aaKnown RBP13.04□□□□□ -0.32
SNHG4-208ENST00000514110 ATG13O75143 517 aa13.04□□□□□ -0.32
SNHG4-208ENST00000514110 HDCP19113 662 aa13.04□□□□□ -0.32
SNHG4-208ENST00000514110 DRD1P21728 446 aa13.04□□□□□ -0.32
SNHG4-208ENST00000514110 GNL1P36915 607 aaPredicted RBP13.04□□□□□ -0.32
SNHG4-208ENST00000514110 IFNAR2P48551 515 aa13.04□□□□□ -0.32
SNHG4-208ENST00000514110 ZXDBP98169 803 aa13.04□□□□□ -0.32
SNHG4-208ENST00000514110 KCNB1Q14721 858 aa13.04□□□□□ -0.32
SNHG4-208ENST00000514110 PSMD6Q15008 389 aa13.04□□□□□ -0.32
SNHG4-208ENST00000514110 MDH1BQ5I0G3 518 aa13.04□□□□□ -0.32
SNHG4-208ENST00000514110 VSTM1Q6UX27 236 aa13.04□□□□□ -0.32
SNHG4-208ENST00000514110 DENND5BQ6ZUT9 1274 aa13.04□□□□□ -0.32
SNHG4-208ENST00000514110 KBTBD6Q86V97 674 aa13.04□□□□□ -0.32
SNHG4-208ENST00000514110 XXYLT1Q8NBI6 393 aa13.04□□□□□ -0.32
SNHG4-208ENST00000514110 NETO1Q8TDF5 533 aa13.04□□□□□ -0.32
SNHG4-208ENST00000514110 GAB3Q8WWW8 586 aa13.04□□□□□ -0.32
SNHG4-208ENST00000514110 ATP2A3Q93084 1043 aa13.04□□□□□ -0.32
SNHG4-208ENST00000514110 FNBP1Q96RU3 617 aa13.04□□□□□ -0.32
SNHG4-208ENST00000514110 LINC00597Q9H2U6 94 aa13.04□□□□□ -0.32
SNHG4-208ENST00000514110 DPEP3Q9H4B8 488 aa13.04□□□□□ -0.32
SNHG4-208ENST00000514110 SLC39A2Q9NP94 309 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms