RNA–Protein interactions for RNA: ENST00000513725.1

SFXN1-210, Transcript of sideroflexin 1, humanhuman

TSL 2

Gene SFXN1, Length 597 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-210ENST00000513725 GRIA2P42262 883 aa12.85□□□□□ -0.35
SFXN1-210ENST00000513725 PPP2R5CQ13362 524 aa12.85□□□□□ -0.35
SFXN1-210ENST00000513725 PFKFB3Q16875 520 aaPredicted RBP12.85□□□□□ -0.35
SFXN1-210ENST00000513725 XKR4Q5GH76 650 aa12.85□□□□□ -0.35
SFXN1-210ENST00000513725 FBXL19Q6PCT2 694 aa12.85□□□□□ -0.35
SFXN1-210ENST00000513725 ETNPPLQ8TBG4 499 aa12.85□□□□□ -0.35
SFXN1-210ENST00000513725 ZFRQ96KR1 1074 aaKnown RBP12.85□□□□□ -0.35
SFXN1-210ENST00000513725 POLR3FQ9H1D9 316 aaPredicted RBP12.85□□□□□ -0.35
SFXN1-210ENST00000513725 C2orf40Q9H1Z8 148 aa12.85□□□□□ -0.35
SFXN1-210ENST00000513725 ZSWIM4Q9H7M6 989 aa12.85□□□□□ -0.35
SFXN1-210ENST00000513725 ARHGEF4Q9NR80 690 aa12.85□□□□□ -0.35
SFXN1-210ENST00000513725 TIMM13Q9Y5L4 95 aaPredicted RBP12.85□□□□□ -0.35
SFXN1-210ENST00000513725 ANK1P16157 1881 aa12.85□□□□□ -0.35
SFXN1-210ENST00000513725 M0QZQ0 153 aa12.84□□□□□ -0.35
SFXN1-210ENST00000513725 ACKR2O00590 384 aa12.84□□□□□ -0.35
SFXN1-210ENST00000513725 ZBTB39O15060 712 aa12.84□□□□□ -0.35
SFXN1-210ENST00000513725 CKMP06732 381 aa12.84□□□□□ -0.35
SFXN1-210ENST00000513725 NCAM1P13591 858 aa12.84□□□□□ -0.35
SFXN1-210ENST00000513725 NDUFV2P19404 249 aa12.84□□□□□ -0.35
SFXN1-210ENST00000513725 GLDCP23378 1020 aa12.84□□□□□ -0.35
SFXN1-210ENST00000513725 CD6P30203 668 aa12.84□□□□□ -0.35
SFXN1-210ENST00000513725 SLC6A11P48066 632 aa12.84□□□□□ -0.35
SFXN1-210ENST00000513725 RTN1Q16799 776 aa12.84□□□□□ -0.35
SFXN1-210ENST00000513725 INF2Q27J81 1249 aa12.84□□□□□ -0.35
SFXN1-210ENST00000513725 GAB4Q2WGN9 574 aa12.84□□□□□ -0.35
SFXN1-210ENST00000513725 C20orf194Q5TEA3 1177 aa12.84□□□□□ -0.35
SFXN1-210ENST00000513725 EEF1DP3Q658K8 133 aa12.84□□□□□ -0.35
SFXN1-210ENST00000513725 CDCA2Q69YH5 1023 aaPredicted RBP12.84□□□□□ -0.35
SFXN1-210ENST00000513725 HIST2H2BCQ6DN03 193 aa12.84□□□□□ -0.35
SFXN1-210ENST00000513725 ALKAL1Q6UXT8 129 aa12.84□□□□□ -0.35
SFXN1-210ENST00000513725 LSMEM2Q8N112 164 aa12.84□□□□□ -0.35
SFXN1-210ENST00000513725 CACTIN-AS1Q8N1I8 211 aa12.84□□□□□ -0.35
SFXN1-210ENST00000513725 CADM4Q8NFZ8 388 aa12.84□□□□□ -0.35
SFXN1-210ENST00000513725 CCDC43Q96MW1 224 aaKnown RBP12.84□□□□□ -0.35
SFXN1-210ENST00000513725 CCDC94Q9BW85 323 aaPredicted RBP12.84□□□□□ -0.35
SFXN1-210ENST00000513725 IL25Q9H293 177 aa12.84□□□□□ -0.35
SFXN1-210ENST00000513725 TMEM206Q9H813 350 aa12.84□□□□□ -0.35
SFXN1-210ENST00000513725 BSNQ9UPA5 3926 aa12.83□□□□□ -0.35
SFXN1-210ENST00000513725 CYP3A7-CYP3A51PA0A087WV96 503 aa12.83□□□□□ -0.36
SFXN1-210ENST00000513725 TRAV19A0A0A6YYK7 116 aa12.83□□□□□ -0.36
SFXN1-210ENST00000513725 E2F8A0AVK6 867 aa12.83□□□□□ -0.36
SFXN1-210ENST00000513725 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.83□□□□□ -0.36
SFXN1-210ENST00000513725 TRIM66O15016 1216 aa12.83□□□□□ -0.36
SFXN1-210ENST00000513725 LDOC1O95751 146 aaPredicted RBP12.83□□□□□ -0.36
SFXN1-210ENST00000513725 CYP3A7P24462 503 aa12.83□□□□□ -0.36
SFXN1-210ENST00000513725 ELAVL4P26378 380 aaKnown RBP12.83□□□□□ -0.36
SFXN1-210ENST00000513725 HSPA4P34932 840 aa12.83□□□□□ -0.36
SFXN1-210ENST00000513725 RESTQ13127 1097 aa12.83□□□□□ -0.36
SFXN1-210ENST00000513725 KIF19Q2TAC6 998 aa12.83□□□□□ -0.36
SFXN1-210ENST00000513725 DCAF12L1Q5VU92 463 aa12.83□□□□□ -0.36
SFXN1-210ENST00000513725 POTEDQ86YR6 584 aa12.83□□□□□ -0.36
SFXN1-210ENST00000513725 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.83□□□□□ -0.36
SFXN1-210ENST00000513725 SH3RF2Q8TEC5 729 aa12.83□□□□□ -0.36
SFXN1-210ENST00000513725 CNDP2Q96KP4 475 aaKnown RBP12.83□□□□□ -0.36
SFXN1-210ENST00000513725 ZMAT2Q96NC0 199 aaKnown RBP12.83□□□□□ -0.36
SFXN1-210ENST00000513725 TRPC7Q9HCX4 862 aa12.83□□□□□ -0.36
SFXN1-210ENST00000513725 CLCA2Q9UQC9 943 aa12.83□□□□□ -0.36
SFXN1-210ENST00000513725 LRBAP50851 2863 aa12.82□□□□□ -0.36
SFXN1-210ENST00000513725 TDP2O95551 362 aa12.82□□□□□ -0.36
SFXN1-210ENST00000513725 SFTPCP11686 197 aa12.82□□□□□ -0.36
SFXN1-210ENST00000513725 KCNE1P15382 129 aa12.82□□□□□ -0.36
SFXN1-210ENST00000513725 LIG1P18858 919 aa12.82□□□□□ -0.36
SFXN1-210ENST00000513725 NTSR1P30989 418 aa12.82□□□□□ -0.36
SFXN1-210ENST00000513725 CSNK1EP49674 416 aaKnown RBP12.82□□□□□ -0.36
SFXN1-210ENST00000513725 AFF3P51826 1226 aaKnown RBP12.82□□□□□ -0.36
SFXN1-210ENST00000513725 ERVPABLB-1P60509 514 aa12.82□□□□□ -0.36
SFXN1-210ENST00000513725 MESP2Q0VG99 397 aa12.82□□□□□ -0.36
SFXN1-210ENST00000513725 DNAJC3Q13217 504 aa12.82□□□□□ -0.36
SFXN1-210ENST00000513725 DMP1Q13316 513 aaPredicted RBP12.82□□□□□ -0.36
SFXN1-210ENST00000513725 EPHA7Q15375 998 aa12.82□□□□□ -0.36
SFXN1-210ENST00000513725 TEAD4Q15561 434 aa12.82□□□□□ -0.36
SFXN1-210ENST00000513725 KRTAP21-3Q3LHN1 58 aa12.82□□□□□ -0.36
SFXN1-210ENST00000513725 OVOS1Q6IE37 1185 aa12.82□□□□□ -0.36
SFXN1-210ENST00000513725 SDE2Q6IQ49 451 aa12.82□□□□□ -0.36
SFXN1-210ENST00000513725 TBCKQ8TEA7 893 aa12.82□□□□□ -0.36
SFXN1-210ENST00000513725 IGSF8Q969P0 613 aa12.82□□□□□ -0.36
SFXN1-210ENST00000513725 C18orf25Q96B23 403 aaPredicted RBP12.82□□□□□ -0.36
SFXN1-210ENST00000513725 TOE1Q96GM8 510 aaKnown RBP12.82□□□□□ -0.36
SFXN1-210ENST00000513725 ARHGAP9Q9BRR9 750 aa12.82□□□□□ -0.36
SFXN1-210ENST00000513725 GPR174Q9BXC1 333 aa12.82□□□□□ -0.36
SFXN1-210ENST00000513725 RGL1Q9NZL6 768 aa12.82□□□□□ -0.36
SFXN1-210ENST00000513725 VAV3Q9UKW4 847 aa12.82□□□□□ -0.36
SFXN1-210ENST00000513725 USP20Q9Y2K6 914 aa12.82□□□□□ -0.36
SFXN1-210ENST00000513725 SNX11Q9Y5W9 270 aa12.82□□□□□ -0.36
SFXN1-210ENST00000513725 POLQO75417 2590 aa12.82□□□□□ -0.36
SFXN1-210ENST00000513725 MYO18AQ92614 2054 aaKnown RBP12.82□□□□□ -0.36
SFXN1-210ENST00000513725 KNL1Q8NG31 2342 aa12.82□□□□□ -0.36
SFXN1-210ENST00000513725 TLN1Q9Y490 2541 aaKnown RBP12.82□□□□□ -0.36
SFXN1-210ENST00000513725 A0A1W2PQF6 199 aa12.81□□□□□ -0.36
SFXN1-210ENST00000513725 TBC1D3BA6NDS4 549 aa12.81□□□□□ -0.36
SFXN1-210ENST00000513725 CYP17A1P05093 508 aa12.81□□□□□ -0.36
SFXN1-210ENST00000513725 TNFSF9P41273 254 aa12.81□□□□□ -0.36
SFXN1-210ENST00000513725 GRM5P41594 1212 aa12.81□□□□□ -0.36
SFXN1-210ENST00000513725 AFMP43652 599 aa12.81□□□□□ -0.36
SFXN1-210ENST00000513725 ACADVLP49748 655 aa12.81□□□□□ -0.36
SFXN1-210ENST00000513725 INHBCP55103 352 aa12.81□□□□□ -0.36
SFXN1-210ENST00000513725 KDSRQ06136 332 aa12.81□□□□□ -0.36
SFXN1-210ENST00000513725 CTTNQ14247 550 aaKnown RBP12.81□□□□□ -0.36
SFXN1-210ENST00000513725 PADI6Q6TGC4 694 aa12.81□□□□□ -0.36
SFXN1-210ENST00000513725 CCDC81Q6ZN84 652 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms