RNA–Protein interactions for RNA: ENST00000513318.1

HMGXB3-204, Transcript of HMG-box containing 3, humanhuman

TSL 3

Gene HMGXB3, Length 749 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-204ENST00000513318 RTL10Q7L3V2 364 aa8.06□□□□□ -1.12
HMGXB3-204ENST00000513318 ACOT1Q86TX2 421 aa8.06□□□□□ -1.12
HMGXB3-204ENST00000513318 RBM23Q86U06 439 aaKnown RBP8.06□□□□□ -1.12
HMGXB3-204ENST00000513318 PALB2Q86YC2 1186 aa8.06□□□□□ -1.12
HMGXB3-204ENST00000513318 SPATA2LQ8IUW3 424 aaPredicted RBP8.06□□□□□ -1.12
HMGXB3-204ENST00000513318 VSTM4Q8IW00 320 aa8.06□□□□□ -1.12
HMGXB3-204ENST00000513318 EFHBQ8N7U6 833 aa8.06□□□□□ -1.12
HMGXB3-204ENST00000513318 SLC4A11Q8NBS3 891 aa8.06□□□□□ -1.12
HMGXB3-204ENST00000513318 MYCBPAPQ8TBZ2 947 aa8.06□□□□□ -1.12
HMGXB3-204ENST00000513318 HDAC7Q8WUI4 952 aa8.06□□□□□ -1.12
HMGXB3-204ENST00000513318 MYLPFQ96A32 169 aa8.06□□□□□ -1.12
HMGXB3-204ENST00000513318 PCED1BQ96HM7 432 aa8.06□□□□□ -1.12
HMGXB3-204ENST00000513318 MRFAP1L1Q96HT8 127 aa8.06□□□□□ -1.12
HMGXB3-204ENST00000513318 EDEM3Q9BZQ6 932 aa8.06□□□□□ -1.12
HMGXB3-204ENST00000513318 TTYH3Q9C0H2 523 aa8.06□□□□□ -1.12
HMGXB3-204ENST00000513318 GPR88Q9GZN0 384 aa8.06□□□□□ -1.12
HMGXB3-204ENST00000513318 ELOVL4Q9GZR5 314 aa8.06□□□□□ -1.12
HMGXB3-204ENST00000513318 PLEKHA4Q9H4M7 779 aa8.06□□□□□ -1.12
HMGXB3-204ENST00000513318 ABCB6Q9NP58 842 aa8.06□□□□□ -1.12
HMGXB3-204ENST00000513318 ABI2Q9NYB9 513 aaPredicted RBP8.06□□□□□ -1.12
HMGXB3-204ENST00000513318 GTF3C4Q9UKN8 822 aa8.06□□□□□ -1.12
HMGXB3-204ENST00000513318 KIAA1257Q9ULG3 409 aa8.06□□□□□ -1.12
HMGXB3-204ENST00000513318 MYO6Q9UM54 1294 aa8.06□□□□□ -1.12
HMGXB3-204ENST00000513318 PCDHB5Q9Y5E4 795 aa8.06□□□□□ -1.12
HMGXB3-204ENST00000513318 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP8.06□□□□□ -1.12
HMGXB3-204ENST00000513318 TCF20Q9UGU0 1960 aaKnown RBP8.05□□□□□ -1.12
HMGXB3-204ENST00000513318 A0A1W2PQJ5 194 aa8.05□□□□□ -1.12
HMGXB3-204ENST00000513318 PER2O15055 1255 aa8.05□□□□□ -1.12
HMGXB3-204ENST00000513318 ATP2C2O75185 946 aa8.05□□□□□ -1.12
HMGXB3-204ENST00000513318 GLP2RO95838 553 aa8.05□□□□□ -1.12
HMGXB3-204ENST00000513318 GYPCP04921 128 aa8.05□□□□□ -1.12
HMGXB3-204ENST00000513318 C8AP07357 584 aa8.05□□□□□ -1.12
HMGXB3-204ENST00000513318 TPM1P09493 284 aa8.05□□□□□ -1.12
HMGXB3-204ENST00000513318 CCDC172P0C7W6 258 aa8.05□□□□□ -1.12
HMGXB3-204ENST00000513318 VDRP11473 427 aa8.05□□□□□ -1.12
HMGXB3-204ENST00000513318 CD19P15391 556 aa8.05□□□□□ -1.12
HMGXB3-204ENST00000513318 EPCAMP16422 314 aa8.05□□□□□ -1.12
HMGXB3-204ENST00000513318 GNA15P30679 374 aa8.05□□□□□ -1.12
HMGXB3-204ENST00000513318 HOXA9P31269 272 aa8.05□□□□□ -1.12
HMGXB3-204ENST00000513318 SOX5P35711 763 aa8.05□□□□□ -1.12
HMGXB3-204ENST00000513318 USP8P40818 1118 aa8.05□□□□□ -1.12
HMGXB3-204ENST00000513318 STAT1P42224 750 aa8.05□□□□□ -1.12
HMGXB3-204ENST00000513318 PDE6CP51160 858 aa8.05□□□□□ -1.12
HMGXB3-204ENST00000513318 ZNF75DP51815 510 aa8.05□□□□□ -1.12
HMGXB3-204ENST00000513318 BPIFB4P59827 614 aa8.05□□□□□ -1.12
HMGXB3-204ENST00000513318 CYP27A1Q02318 531 aa8.05□□□□□ -1.12
HMGXB3-204ENST00000513318 ADCY1Q08828 1119 aa8.05□□□□□ -1.12
HMGXB3-204ENST00000513318 ORC1Q13415 861 aa8.05□□□□□ -1.12
HMGXB3-204ENST00000513318 KCNC3Q14003 757 aa8.05□□□□□ -1.12
HMGXB3-204ENST00000513318 PTPN21Q16825 1174 aa8.05□□□□□ -1.12
HMGXB3-204ENST00000513318 CCDC142Q17RM4 750 aa8.05□□□□□ -1.12
HMGXB3-204ENST00000513318 ARHGAP17Q68EM7 881 aa8.05□□□□□ -1.12
HMGXB3-204ENST00000513318 VSTM1Q6UX27 236 aa8.05□□□□□ -1.12
HMGXB3-204ENST00000513318 TMEM184AQ6ZMB5 413 aa8.05□□□□□ -1.12
HMGXB3-204ENST00000513318 CCDC149Q6ZUS6 474 aa8.05□□□□□ -1.12
HMGXB3-204ENST00000513318 FAM35AQ86V20 835 aa8.05□□□□□ -1.12
HMGXB3-204ENST00000513318 LRRTM3Q86VH5 581 aa8.05□□□□□ -1.12
HMGXB3-204ENST00000513318 TCEAL8Q8IYN2 117 aa8.05□□□□□ -1.12
HMGXB3-204ENST00000513318 FAM71AQ8IYT1 594 aa8.05□□□□□ -1.12
HMGXB3-204ENST00000513318 MICALL1Q8N3F8 863 aa8.05□□□□□ -1.12
HMGXB3-204ENST00000513318 KREMEN2Q8NCW0 462 aa8.05□□□□□ -1.12
HMGXB3-204ENST00000513318 ZNF397Q8NF99 534 aaPredicted RBP8.05□□□□□ -1.12
HMGXB3-204ENST00000513318 SLC22A17Q8WUG5 538 aa8.05□□□□□ -1.12
HMGXB3-204ENST00000513318 BAP1Q92560 729 aa8.05□□□□□ -1.12
HMGXB3-204ENST00000513318 CASP10Q92851 521 aa8.05□□□□□ -1.12
HMGXB3-204ENST00000513318 CYFIP2Q96F07 1278 aa8.05□□□□□ -1.12
HMGXB3-204ENST00000513318 SMARCD1Q96GM5 515 aa8.05□□□□□ -1.12
HMGXB3-204ENST00000513318 HEXIM2Q96MH2 286 aaKnown RBP8.05□□□□□ -1.12
HMGXB3-204ENST00000513318 PGLYRP2Q96PD5 576 aa8.05□□□□□ -1.12
HMGXB3-204ENST00000513318 MED10Q9BTT4 135 aa8.05□□□□□ -1.12
HMGXB3-204ENST00000513318 NUCKS1Q9H1E3 243 aaKnown RBP8.05□□□□□ -1.12
HMGXB3-204ENST00000513318 SFXN1Q9H9B4 322 aa8.05□□□□□ -1.12
HMGXB3-204ENST00000513318 GRPEL1Q9HAV7 217 aa8.05□□□□□ -1.12
HMGXB3-204ENST00000513318 CYP4F11Q9HBI6 524 aa8.05□□□□□ -1.12
HMGXB3-204ENST00000513318 MAN1C1Q9NR34 630 aa8.05□□□□□ -1.12
HMGXB3-204ENST00000513318 FAM49BQ9NUQ9 324 aa8.05□□□□□ -1.12
HMGXB3-204ENST00000513318 TMLHEQ9NVH6 421 aa8.05□□□□□ -1.12
HMGXB3-204ENST00000513318 DZANK1Q9NVP4 752 aa8.05□□□□□ -1.12
HMGXB3-204ENST00000513318 KIF26AQ9ULI4 1882 aaPredicted RBP8.04□□□□□ -1.12
HMGXB3-204ENST00000513318 LRRC53A6NM62 1247 aa8.04□□□□□ -1.12
HMGXB3-204ENST00000513318 RNF225M0QZC1 329 aaPredicted RBP8.04□□□□□ -1.12
HMGXB3-204ENST00000513318 O00370 1275 aa8.04□□□□□ -1.12
HMGXB3-204ENST00000513318 FOXN3O00409 490 aaPredicted RBP8.04□□□□□ -1.12
HMGXB3-204ENST00000513318 PRRG1O14668 218 aa8.04□□□□□ -1.12
HMGXB3-204ENST00000513318 CYP26A1O43174 497 aa8.04□□□□□ -1.12
HMGXB3-204ENST00000513318 MED7O43513 233 aa8.04□□□□□ -1.12
HMGXB3-204ENST00000513318 GFPT2O94808 682 aa8.04□□□□□ -1.12
HMGXB3-204ENST00000513318 VNN2O95498 520 aa8.04□□□□□ -1.12
HMGXB3-204ENST00000513318 FAM200BP0CF97 657 aa8.04□□□□□ -1.12
HMGXB3-204ENST00000513318 PNMA6AP0CW24 399 aaPredicted RBP8.04□□□□□ -1.12
HMGXB3-204ENST00000513318 CCDC130P13994 396 aa8.04□□□□□ -1.12
HMGXB3-204ENST00000513318 CD46P15529 392 aa8.04□□□□□ -1.12
HMGXB3-204ENST00000513318 FERP16591 822 aa8.04□□□□□ -1.12
HMGXB3-204ENST00000513318 BDNFP23560 247 aa8.04□□□□□ -1.12
HMGXB3-204ENST00000513318 CDC25BP30305 580 aa8.04□□□□□ -1.12
HMGXB3-204ENST00000513318 SSTR3P32745 418 aaPredicted RBP8.04□□□□□ -1.12
HMGXB3-204ENST00000513318 GTF2F1P35269 517 aaKnown RBP eCLIP8.04□□□□□ -1.12
HMGXB3-204ENST00000513318 MAGEA11P43364 429 aa8.04□□□□□ -1.12
HMGXB3-204ENST00000513318 TUFMP49411 452 aaKnown RBP8.04□□□□□ -1.12
HMGXB3-204ENST00000513318 BCAT1P54687 386 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms