RNA–Protein interactions for RNA: ENST00000512687.5

CDK7-208, Transcript of cyclin dependent kinase 7, humanhuman

TSL 1 (best)

Gene CDK7, Length 905 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7-208ENST00000512687 RAP1GAPP47736 663 aa12.85□□□□□ -0.35
CDK7-208ENST00000512687 CACNA2D1P54289 1103 aa12.85□□□□□ -0.35
CDK7-208ENST00000512687 RPL10AP62906 217 aaKnown RBP12.85□□□□□ -0.35
CDK7-208ENST00000512687 CLDN10P78369 228 aa12.85□□□□□ -0.35
CDK7-208ENST00000512687 TNK2Q07912 1038 aa12.85□□□□□ -0.35
CDK7-208ENST00000512687 WDR72Q3MJ13 1102 aa12.85□□□□□ -0.35
CDK7-208ENST00000512687 MDH1BQ5I0G3 518 aa12.85□□□□□ -0.35
CDK7-208ENST00000512687 C1orf220Q5T0J3 134 aa12.85□□□□□ -0.35
CDK7-208ENST00000512687 TXNDC11Q6PKC3 985 aa12.85□□□□□ -0.35
CDK7-208ENST00000512687 SCN4BQ8IWT1 228 aa12.85□□□□□ -0.35
CDK7-208ENST00000512687 YAF2Q8IY57 180 aa12.85□□□□□ -0.35
CDK7-208ENST00000512687 CMTM8Q8IZV2 173 aa12.85□□□□□ -0.35
CDK7-208ENST00000512687 TTC8Q8TAM2 541 aa12.85□□□□□ -0.35
CDK7-208ENST00000512687 GOLGA5Q8TBA6 731 aa12.85□□□□□ -0.35
CDK7-208ENST00000512687 TMC2Q8TDI7 906 aa12.85□□□□□ -0.35
CDK7-208ENST00000512687 BPIFB1Q8TDL5 484 aa12.85□□□□□ -0.35
CDK7-208ENST00000512687 TMEM174Q8WUU8 243 aa12.85□□□□□ -0.35
CDK7-208ENST00000512687 USP13Q92995 863 aaPredicted RBP12.85□□□□□ -0.35
CDK7-208ENST00000512687 TRMT2BQ96GJ1 504 aaKnown RBP12.85□□□□□ -0.35
CDK7-208ENST00000512687 PCED1BQ96HM7 432 aa12.85□□□□□ -0.35
CDK7-208ENST00000512687 SDCBP2Q9H190 292 aa12.85□□□□□ -0.35
CDK7-208ENST00000512687 SMYD3Q9H7B4 428 aa12.85□□□□□ -0.35
CDK7-208ENST00000512687 SPATA6Q9NWH7 488 aaPredicted RBP12.85□□□□□ -0.35
CDK7-208ENST00000512687 GTSE1Q9NYZ3 720 aa12.85□□□□□ -0.35
CDK7-208ENST00000512687 METRNQ9UJH8 293 aa12.85□□□□□ -0.35
CDK7-208ENST00000512687 DPYSL4O14531 572 aa12.84□□□□□ -0.35
CDK7-208ENST00000512687 ZNF202O95125 648 aa12.84□□□□□ -0.35
CDK7-208ENST00000512687 CCNE1P24864 410 aa12.84□□□□□ -0.35
CDK7-208ENST00000512687 MAGEA9P43362 315 aa12.84□□□□□ -0.35
CDK7-208ENST00000512687 RPS9P46781 194 aaKnown RBP12.84□□□□□ -0.35
CDK7-208ENST00000512687 USP46P62068 366 aa12.84□□□□□ -0.35
CDK7-208ENST00000512687 TNNC1P63316 161 aa12.84□□□□□ -0.35
CDK7-208ENST00000512687 CYP27A1Q02318 531 aa12.84□□□□□ -0.35
CDK7-208ENST00000512687 ARHGAP29Q52LW3 1261 aa12.84□□□□□ -0.35
CDK7-208ENST00000512687 SCARA5Q6ZMJ2 495 aa12.84□□□□□ -0.35
CDK7-208ENST00000512687 C4orf50Q6ZRC1 276 aa12.84□□□□□ -0.35
CDK7-208ENST00000512687 FAM3CQ92520 227 aa12.84□□□□□ -0.35
CDK7-208ENST00000512687 NKD2Q969F2 451 aaPredicted RBP12.84□□□□□ -0.35
CDK7-208ENST00000512687 MYRFLQ96LU7 910 aa12.84□□□□□ -0.35
CDK7-208ENST00000512687 SLC22A12Q96S37 553 aa12.84□□□□□ -0.35
CDK7-208ENST00000512687 SNX25Q9H3E2 840 aa12.84□□□□□ -0.35
CDK7-208ENST00000512687 VRTNQ9H8Y1 702 aa12.84□□□□□ -0.35
CDK7-208ENST00000512687 MAGEC2Q9UBF1 373 aaPredicted RBP12.84□□□□□ -0.35
CDK7-208ENST00000512687 NXF1Q9UBU9 619 aaKnown RBP12.84□□□□□ -0.35
CDK7-208ENST00000512687 MAPK8IP1Q9UQF2 711 aa12.84□□□□□ -0.35
CDK7-208ENST00000512687 TRAF3IP3Q9Y228 551 aa12.84□□□□□ -0.35
CDK7-208ENST00000512687 ATP6V1DQ9Y5K8 247 aa12.84□□□□□ -0.35
CDK7-208ENST00000512687 OTOGLQ3ZCN5 2332 aa12.84□□□□□ -0.35
CDK7-208ENST00000512687 SPAG17Q6Q759 2223 aa12.83□□□□□ -0.36
CDK7-208ENST00000512687 CLDN5O00501 218 aa12.83□□□□□ -0.36
CDK7-208ENST00000512687 MAN2B1O00754 1011 aa12.83□□□□□ -0.36
CDK7-208ENST00000512687 LAMTOR5O43504 91 aa12.83□□□□□ -0.36
CDK7-208ENST00000512687 PHACTR2O75167 634 aa12.83□□□□□ -0.36
CDK7-208ENST00000512687 CHRNB1P11230 501 aa12.83□□□□□ -0.36
CDK7-208ENST00000512687 DDX6P26196 483 aaKnown RBP eCLIP12.83□□□□□ -0.36
CDK7-208ENST00000512687 ATICP31939 592 aa12.83□□□□□ -0.36
CDK7-208ENST00000512687 CTHP32929 405 aa12.83□□□□□ -0.36
CDK7-208ENST00000512687 GNL1P36915 607 aaPredicted RBP12.83□□□□□ -0.36
CDK7-208ENST00000512687 CDH8P55286 799 aa12.83□□□□□ -0.36
CDK7-208ENST00000512687 MTAPQ13126 283 aa12.83□□□□□ -0.36
CDK7-208ENST00000512687 BIRC3Q13489 604 aa12.83□□□□□ -0.36
CDK7-208ENST00000512687 TRPC3Q13507 836 aa12.83□□□□□ -0.36
CDK7-208ENST00000512687 NCOA4Q13772 614 aa12.83□□□□□ -0.36
CDK7-208ENST00000512687 GAS6Q14393 721 aa12.83□□□□□ -0.36
CDK7-208ENST00000512687 ZNF699Q32M78 642 aa12.83□□□□□ -0.36
CDK7-208ENST00000512687 CEP135Q66GS9 1140 aa12.83□□□□□ -0.36
CDK7-208ENST00000512687 TRIM68Q6AZZ1 485 aa12.83□□□□□ -0.36
CDK7-208ENST00000512687 TSSK4Q6SA08 328 aa12.83□□□□□ -0.36
CDK7-208ENST00000512687 MON1AQ86VX9 555 aa12.83□□□□□ -0.36
CDK7-208ENST00000512687 CELF5Q8N6W0 485 aaKnown RBP12.83□□□□□ -0.36
CDK7-208ENST00000512687 OR6B3Q8NGW1 331 aa12.83□□□□□ -0.36
CDK7-208ENST00000512687 MYCBPAPQ8TBZ2 947 aa12.83□□□□□ -0.36
CDK7-208ENST00000512687 CSGALNACT1Q8TDX6 532 aa12.83□□□□□ -0.36
CDK7-208ENST00000512687 MRPS31Q92665 395 aaKnown RBP12.83□□□□□ -0.36
CDK7-208ENST00000512687 SYAP1Q96A49 352 aaPredicted RBP12.83□□□□□ -0.36
CDK7-208ENST00000512687 CHFRQ96EP1 664 aa12.83□□□□□ -0.36
CDK7-208ENST00000512687 SPATA17Q96L03 361 aa12.83□□□□□ -0.36
CDK7-208ENST00000512687 NELL2Q99435 816 aa12.83□□□□□ -0.36
CDK7-208ENST00000512687 CHRDQ9H2X0 955 aa12.83□□□□□ -0.36
CDK7-208ENST00000512687 HPS4Q9NQG7 708 aa12.83□□□□□ -0.36
CDK7-208ENST00000512687 PRMT8Q9NR22 394 aaPredicted RBP12.83□□□□□ -0.36
CDK7-208ENST00000512687 UXTQ9UBK9 157 aaPredicted RBP12.83□□□□□ -0.36
CDK7-208ENST00000512687 MRPS17Q9Y2R5 130 aaKnown RBP12.83□□□□□ -0.36
CDK7-208ENST00000512687 C2orf78A6NCI8 922 aa12.82□□□□□ -0.36
CDK7-208ENST00000512687 OTOL1A6NHN0 477 aaPredicted RBP12.82□□□□□ -0.36
CDK7-208ENST00000512687 A8MXQ7 604 aa12.82□□□□□ -0.36
CDK7-208ENST00000512687 SPECC1L-ADORA2AF8WAN1 911 aa12.82□□□□□ -0.36
CDK7-208ENST00000512687 TRIM49P0CI25 452 aa12.82□□□□□ -0.36
CDK7-208ENST00000512687 TRIM49CP0CI26 452 aa12.82□□□□□ -0.36
CDK7-208ENST00000512687 PTPN1P18031 435 aaKnown RBP12.82□□□□□ -0.36
CDK7-208ENST00000512687 AVPR1AP37288 418 aa12.82□□□□□ -0.36
CDK7-208ENST00000512687 KPNA1P52294 538 aaPredicted RBP12.82□□□□□ -0.36
CDK7-208ENST00000512687 CSTF1Q05048 431 aaKnown RBP12.82□□□□□ -0.36
CDK7-208ENST00000512687 USP4Q13107 963 aa12.82□□□□□ -0.36
CDK7-208ENST00000512687 PNOCQ13519 176 aa12.82□□□□□ -0.36
CDK7-208ENST00000512687 KCNB1Q14721 858 aa12.82□□□□□ -0.36
CDK7-208ENST00000512687 NFIL3Q16649 462 aa12.82□□□□□ -0.36
CDK7-208ENST00000512687 ZACNQ401N2 412 aa12.82□□□□□ -0.36
CDK7-208ENST00000512687 ZCWPW2Q504Y3 356 aa12.82□□□□□ -0.36
CDK7-208ENST00000512687 SPOPLQ6IQ16 392 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms