RNA–Protein interactions for RNA: ENST00000512476.1

TRAPPC11-209, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC11, Length 2,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-209ENST00000512476 POLR2MP0CAP2 368 aa6.68□□□□□ -1.34
TRAPPC11-209ENST00000512476 TMIGD3P0DMS9 266 aaPredicted RBP6.68□□□□□ -1.34
TRAPPC11-209ENST00000512476 MYL4P12829 197 aa6.68□□□□□ -1.34
TRAPPC11-209ENST00000512476 LAMP2P13473 410 aa6.68□□□□□ -1.34
TRAPPC11-209ENST00000512476 PRKCIP41743 596 aa6.68□□□□□ -1.34
TRAPPC11-209ENST00000512476 HARS2P49590 506 aaKnown RBP6.68□□□□□ -1.34
TRAPPC11-209ENST00000512476 NFIAQ12857 509 aa6.68□□□□□ -1.34
TRAPPC11-209ENST00000512476 MAMLD1Q13495 774 aa6.68□□□□□ -1.34
TRAPPC11-209ENST00000512476 GLE1Q53GS7 698 aaKnown RBP6.68□□□□□ -1.34
TRAPPC11-209ENST00000512476 ATG16L1Q676U5 607 aa6.68□□□□□ -1.34
TRAPPC11-209ENST00000512476 MCTP2Q6DN12 878 aa6.68□□□□□ -1.34
TRAPPC11-209ENST00000512476 CRELD2Q6UXH1 353 aaPredicted RBP6.68□□□□□ -1.34
TRAPPC11-209ENST00000512476 C15orf52Q6ZUT6 534 aaKnown RBP6.68□□□□□ -1.34
TRAPPC11-209ENST00000512476 DIS3L2Q8IYB7 885 aaKnown RBP6.68□□□□□ -1.34
TRAPPC11-209ENST00000512476 ZNF687Q8N1G0 1237 aa6.68□□□□□ -1.34
TRAPPC11-209ENST00000512476 SH2D3CQ8N5H7 860 aa6.68□□□□□ -1.34
TRAPPC11-209ENST00000512476 TRIML2Q8N7C3 387 aa6.68□□□□□ -1.34
TRAPPC11-209ENST00000512476 PCSK9Q8NBP7 692 aaKnown RBP6.68□□□□□ -1.34
TRAPPC11-209ENST00000512476 OR13H1Q8NG92 308 aa6.68□□□□□ -1.34
TRAPPC11-209ENST00000512476 ZNF671Q8TAW3 534 aa6.68□□□□□ -1.34
TRAPPC11-209ENST00000512476 SLC5A11Q8WWX8 675 aa6.68□□□□□ -1.34
TRAPPC11-209ENST00000512476 TBC1D5Q92609 795 aa6.68□□□□□ -1.34
TRAPPC11-209ENST00000512476 KCNN1Q92952 543 aa6.68□□□□□ -1.34
TRAPPC11-209ENST00000512476 NXPE3Q969Y0 559 aa6.68□□□□□ -1.34
TRAPPC11-209ENST00000512476 FEM1CQ96JP0 617 aa6.68□□□□□ -1.34
TRAPPC11-209ENST00000512476 PNMA5Q96PV4 448 aa6.68□□□□□ -1.34
TRAPPC11-209ENST00000512476 CDK5RAP1Q96SZ6 601 aaKnown RBP6.68□□□□□ -1.34
TRAPPC11-209ENST00000512476 CITED2Q99967 270 aaPredicted RBP6.68□□□□□ -1.34
TRAPPC11-209ENST00000512476 SPXQ9BT56 116 aa6.68□□□□□ -1.34
TRAPPC11-209ENST00000512476 FOXP3Q9BZS1 431 aa6.68□□□□□ -1.34
TRAPPC11-209ENST00000512476 TMEM206Q9H813 350 aa6.68□□□□□ -1.34
TRAPPC11-209ENST00000512476 ERVMER34-1Q9H9K5 563 aa6.68□□□□□ -1.34
TRAPPC11-209ENST00000512476 USP36Q9P275 1121 aaKnown RBP6.68□□□□□ -1.34
TRAPPC11-209ENST00000512476 PCDHA4Q9UN74 947 aa6.68□□□□□ -1.34
TRAPPC11-209ENST00000512476 SMG5Q9UPR3 1016 aaKnown RBP6.68□□□□□ -1.34
TRAPPC11-209ENST00000512476 CAB39Q9Y376 341 aaPredicted RBP6.68□□□□□ -1.34
TRAPPC11-209ENST00000512476 SPO11Q9Y5K1 396 aa6.68□□□□□ -1.34
TRAPPC11-209ENST00000512476 E9PCH4 1651 aa6.68□□□□□ -1.34
TRAPPC11-209ENST00000512476 ATP10AO60312 1499 aa6.68□□□□□ -1.34
TRAPPC11-209ENST00000512476 YEATS2Q9ULM3 1422 aa6.68□□□□□ -1.34
TRAPPC11-209ENST00000512476 CTAGE15A4D2H0 777 aa6.68□□□□□ -1.34
TRAPPC11-209ENST00000512476 FTLP02792 175 aaPredicted RBP6.68□□□□□ -1.34
TRAPPC11-209ENST00000512476 CTAGE8P0CG41 777 aa6.68□□□□□ -1.34
TRAPPC11-209ENST00000512476 CST5P28325 142 aaPredicted RBP6.68□□□□□ -1.34
TRAPPC11-209ENST00000512476 SLC7A1P30825 629 aa6.68□□□□□ -1.34
TRAPPC11-209ENST00000512476 CCR1P32246 355 aa6.68□□□□□ -1.34
TRAPPC11-209ENST00000512476 ICAM3P32942 547 aa6.68□□□□□ -1.34
TRAPPC11-209ENST00000512476 PHKA2P46019 1235 aa6.68□□□□□ -1.34
TRAPPC11-209ENST00000512476 VPS41P49754 854 aa6.68□□□□□ -1.34
TRAPPC11-209ENST00000512476 CCNHP51946 323 aaPredicted RBP6.68□□□□□ -1.34
TRAPPC11-209ENST00000512476 IRF3Q14653 427 aa6.68□□□□□ -1.34
TRAPPC11-209ENST00000512476 MCMDC2Q4G0Z9 681 aa6.68□□□□□ -1.34
TRAPPC11-209ENST00000512476 CCDC157Q569K6 752 aa6.68□□□□□ -1.34
TRAPPC11-209ENST00000512476 CCDC178Q5BJE1 867 aa6.68□□□□□ -1.34
TRAPPC11-209ENST00000512476 PRAMEF14Q5SWL7 426 aa6.68□□□□□ -1.34
TRAPPC11-209ENST00000512476 CYP4F22Q6NT55 531 aa6.68□□□□□ -1.34
TRAPPC11-209ENST00000512476 CCDC62Q6P9F0 684 aa6.68□□□□□ -1.34
TRAPPC11-209ENST00000512476 USP49Q70CQ1 688 aa6.68□□□□□ -1.34
TRAPPC11-209ENST00000512476 CTAGE6Q86UF2 777 aa6.68□□□□□ -1.34
TRAPPC11-209ENST00000512476 CNTN4Q8IWV2 1026 aa6.68□□□□□ -1.34
TRAPPC11-209ENST00000512476 CTAGE4Q8IX94 777 aa6.68□□□□□ -1.34
TRAPPC11-209ENST00000512476 CCDC65Q8IXS2 484 aa6.68□□□□□ -1.34
TRAPPC11-209ENST00000512476 KREMEN2Q8NCW0 462 aa6.68□□□□□ -1.34
TRAPPC11-209ENST00000512476 RAB7BQ96AH8 199 aa6.68□□□□□ -1.34
TRAPPC11-209ENST00000512476 NEIL1Q96FI4 390 aaPredicted RBP6.68□□□□□ -1.34
TRAPPC11-209ENST00000512476 VCPIP1Q96JH7 1222 aa6.68□□□□□ -1.34
TRAPPC11-209ENST00000512476 NSUN5Q96P11 429 aaKnown RBP6.68□□□□□ -1.34
TRAPPC11-209ENST00000512476 METTL22Q9BUU2 404 aaPredicted RBP6.68□□□□□ -1.34
TRAPPC11-209ENST00000512476 ADAM7Q9H2U9 754 aa6.68□□□□□ -1.34
TRAPPC11-209ENST00000512476 KCNF1Q9H3M0 494 aa6.68□□□□□ -1.34
TRAPPC11-209ENST00000512476 ZNF395Q9H8N7 513 aaPredicted RBP6.68□□□□□ -1.34
TRAPPC11-209ENST00000512476 SAYSD1Q9NPB0 183 aa6.68□□□□□ -1.34
TRAPPC11-209ENST00000512476 MTUS1Q9ULD2 1270 aa6.68□□□□□ -1.34
TRAPPC11-209ENST00000512476 KLHL20Q9Y2M5 609 aa6.68□□□□□ -1.34
TRAPPC11-209ENST00000512476 HIF3AQ9Y2N7 669 aa6.68□□□□□ -1.34
TRAPPC11-209ENST00000512476 EME2A4GXA9 379 aaPredicted RBP6.67□□□□□ -1.34
TRAPPC11-209ENST00000512476 A8MXE2 369 aa6.67□□□□□ -1.34
TRAPPC11-209ENST00000512476 AQP7O14520 342 aa6.67□□□□□ -1.34
TRAPPC11-209ENST00000512476 IFIT3O14879 490 aaKnown RBP6.67□□□□□ -1.34
TRAPPC11-209ENST00000512476 TUBBP07437 444 aa6.67□□□□□ -1.34
TRAPPC11-209ENST00000512476 NR3C2P08235 984 aa6.67□□□□□ -1.34
TRAPPC11-209ENST00000512476 PDGFRAP16234 1089 aa6.67□□□□□ -1.34
TRAPPC11-209ENST00000512476 LUMP51884 338 aaPredicted RBP6.67□□□□□ -1.34
TRAPPC11-209ENST00000512476 RPS16P62249 146 aaKnown RBP6.67□□□□□ -1.34
TRAPPC11-209ENST00000512476 CCDC173Q0VFZ6 552 aa6.67□□□□□ -1.34
TRAPPC11-209ENST00000512476 PLD1Q13393 1074 aa6.67□□□□□ -1.34
TRAPPC11-209ENST00000512476 TRIM25Q14258 630 aaKnown RBP6.67□□□□□ -1.34
TRAPPC11-209ENST00000512476 PDK1Q15118 436 aa6.67□□□□□ -1.34
TRAPPC11-209ENST00000512476 BBS9Q3SYG4 887 aa6.67□□□□□ -1.34
TRAPPC11-209ENST00000512476 UTP14CQ5TAP6 766 aaKnown RBP6.67□□□□□ -1.34
TRAPPC11-209ENST00000512476 PSAPL1Q6NUJ1 521 aa6.67□□□□□ -1.34
TRAPPC11-209ENST00000512476 ARMC9Q7Z3E5 817 aa6.67□□□□□ -1.34
TRAPPC11-209ENST00000512476 SUPT20HQ8NEM7 779 aa6.67□□□□□ -1.34
TRAPPC11-209ENST00000512476 RASSF8Q8NHQ8 419 aa6.67□□□□□ -1.34
TRAPPC11-209ENST00000512476 MDM1Q8TC05 714 aa6.67□□□□□ -1.34
TRAPPC11-209ENST00000512476 MRPS27Q92552 414 aaKnown RBP6.67□□□□□ -1.34
TRAPPC11-209ENST00000512476 RAPGEF5Q92565 580 aa6.67□□□□□ -1.34
TRAPPC11-209ENST00000512476 TMIGD2Q96BF3 282 aa6.67□□□□□ -1.34
TRAPPC11-209ENST00000512476 SUCLG2Q96I99 432 aa6.67□□□□□ -1.34
TRAPPC11-209ENST00000512476 PRR14Q9BWN1 585 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms