RNA–Protein interactions for RNA: ENST00000512229.6

PCDHA4-202, Transcript of protocadherin alpha 4, humanhuman

TSL 1 (best) BASIC

Gene PCDHA4, Length 4,163 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4-202ENST00000512229 GOLGA8QA0A0J9YX86 632 aa13.68□□□□□ -0.22
PCDHA4-202ENST00000512229 GOLGA8OA6NCC3 632 aa13.68□□□□□ -0.22
PCDHA4-202ENST00000512229 GOLGA8NF8WBI6 632 aa13.68□□□□□ -0.22
PCDHA4-202ENST00000512229 MTSS1O43312 755 aa13.68□□□□□ -0.22
PCDHA4-202ENST00000512229 SPAG6O75602 509 aa13.68□□□□□ -0.22
PCDHA4-202ENST00000512229 HSPA4LO95757 839 aa13.68□□□□□ -0.22
PCDHA4-202ENST00000512229 HMGCRP04035 888 aa13.68□□□□□ -0.22
PCDHA4-202ENST00000512229 ICAM3P32942 547 aa13.68□□□□□ -0.22
PCDHA4-202ENST00000512229 RECQLP46063 649 aaPredicted RBP13.68□□□□□ -0.22
PCDHA4-202ENST00000512229 CTCFP49711 727 aaPredicted RBP13.68□□□□□ -0.22
PCDHA4-202ENST00000512229 CXCL17Q6UXB2 119 aa13.68□□□□□ -0.22
PCDHA4-202ENST00000512229 NUDCD3Q8IVD9 361 aa13.68□□□□□ -0.22
PCDHA4-202ENST00000512229 UBN1Q9NPG3 1134 aa13.68□□□□□ -0.22
PCDHA4-202ENST00000512229 ANGPTL3Q9Y5C1 460 aa13.68□□□□□ -0.22
PCDHA4-202ENST00000512229 FRMD3A2A2Y4 597 aa13.68□□□□□ -0.22
PCDHA4-202ENST00000512229 KPNA7A9QM74 516 aa13.68□□□□□ -0.22
PCDHA4-202ENST00000512229 AP3B1O00203 1094 aa13.68□□□□□ -0.22
PCDHA4-202ENST00000512229 S100BP04271 92 aaPredicted RBP13.68□□□□□ -0.22
PCDHA4-202ENST00000512229 TNFSF9P41273 254 aa13.68□□□□□ -0.22
PCDHA4-202ENST00000512229 LMNTD2Q8IXW0 634 aa13.68□□□□□ -0.22
PCDHA4-202ENST00000512229 NDUFAF2Q8N183 169 aa13.68□□□□□ -0.22
PCDHA4-202ENST00000512229 ATPAF2Q8N5M1 289 aa13.68□□□□□ -0.22
PCDHA4-202ENST00000512229 KRT35Q92764 455 aa13.68□□□□□ -0.22
PCDHA4-202ENST00000512229 WHRNQ9P202 907 aa13.68□□□□□ -0.22
PCDHA4-202ENST00000512229 PSMC3IPQ9P2W1 217 aaPredicted RBP13.68□□□□□ -0.22
PCDHA4-202ENST00000512229 FIS1Q9Y3D6 152 aa13.68□□□□□ -0.22
PCDHA4-202ENST00000512229 CASTOR2A6NHX0 329 aa13.67□□□□□ -0.22
PCDHA4-202ENST00000512229 BTBD19C9JJ37 291 aa13.67□□□□□ -0.22
PCDHA4-202ENST00000512229 ZNF200P98182 395 aaPredicted RBP13.67□□□□□ -0.22
PCDHA4-202ENST00000512229 USP33Q8TEY7 942 aa13.67□□□□□ -0.22
PCDHA4-202ENST00000512229 COLEC11Q9BWP8 271 aa13.67□□□□□ -0.22
PCDHA4-202ENST00000512229 DHX33Q9H6R0 707 aaKnown RBP13.67□□□□□ -0.22
PCDHA4-202ENST00000512229 GPATCH2LQ9NWQ4 482 aa13.67□□□□□ -0.22
PCDHA4-202ENST00000512229 ARHGAP28Q9P2N2 729 aa13.67□□□□□ -0.22
PCDHA4-202ENST00000512229 DCTN4Q9UJW0 460 aa13.67□□□□□ -0.22
PCDHA4-202ENST00000512229 BAZ2AQ9UIF9 1905 aaKnown RBP13.67□□□□□ -0.22
PCDHA4-202ENST00000512229 TLR2O60603 784 aa13.67□□□□□ -0.22
PCDHA4-202ENST00000512229 CHN1P15882 459 aa13.67□□□□□ -0.22
PCDHA4-202ENST00000512229 IRAK1P51617 712 aa13.67□□□□□ -0.22
PCDHA4-202ENST00000512229 FAM110CQ1W6H9 321 aa13.67□□□□□ -0.22
PCDHA4-202ENST00000512229 RGMBQ6NW40 437 aa13.67□□□□□ -0.22
PCDHA4-202ENST00000512229 CEP120Q8N960 986 aa13.67□□□□□ -0.22
PCDHA4-202ENST00000512229 C3orf20Q8ND61 904 aa13.67□□□□□ -0.22
PCDHA4-202ENST00000512229 ALKBH8Q96BT7 664 aaKnown RBP13.67□□□□□ -0.22
PCDHA4-202ENST00000512229 PABPC5Q96DU9 382 aaKnown RBP13.67□□□□□ -0.22
PCDHA4-202ENST00000512229 CCT8L2Q96SF2 557 aa13.67□□□□□ -0.22
PCDHA4-202ENST00000512229 TMEM121Q9BTD3 319 aa13.67□□□□□ -0.22
PCDHA4-202ENST00000512229 TIMM13Q9Y5L4 95 aaPredicted RBP13.67□□□□□ -0.22
PCDHA4-202ENST00000512229 RARAP10276 462 aa13.67□□□□□ -0.22
PCDHA4-202ENST00000512229 NAA25Q14CX7 972 aa13.67□□□□□ -0.22
PCDHA4-202ENST00000512229 DUSP28Q4G0W2 176 aa13.67□□□□□ -0.22
PCDHA4-202ENST00000512229 KDELC2Q7Z4H8 507 aa13.67□□□□□ -0.22
PCDHA4-202ENST00000512229 C4orf33Q8N1A6 199 aa13.67□□□□□ -0.22
PCDHA4-202ENST00000512229 BSNDQ8WZ55 320 aa13.67□□□□□ -0.22
PCDHA4-202ENST00000512229 SGSM3Q96HU1 749 aa13.67□□□□□ -0.22
PCDHA4-202ENST00000512229 PPP1R12CQ9BZL4 782 aa13.67□□□□□ -0.22
PCDHA4-202ENST00000512229 CATSPERBQ9H7T0 1116 aa13.67□□□□□ -0.22
PCDHA4-202ENST00000512229 DDX43Q9NXZ2 648 aaKnown RBP13.67□□□□□ -0.22
PCDHA4-202ENST00000512229 PPARGC1AQ9UBK2 798 aaKnown RBP13.67□□□□□ -0.22
PCDHA4-202ENST00000512229 PKD1L3Q7Z443 1732 aa13.67□□□□□ -0.22
PCDHA4-202ENST00000512229 EIF3HO15372 352 aaKnown RBP eCLIP13.66□□□□□ -0.22
PCDHA4-202ENST00000512229 B4GALT5O43286 388 aa13.66□□□□□ -0.22
PCDHA4-202ENST00000512229 POMCP01189 267 aa13.66□□□□□ -0.22
PCDHA4-202ENST00000512229 CALCAP01258 141 aa13.66□□□□□ -0.22
PCDHA4-202ENST00000512229 NFICP08651 508 aa13.66□□□□□ -0.22
PCDHA4-202ENST00000512229 NCF2P19878 526 aaPredicted RBP13.66□□□□□ -0.22
PCDHA4-202ENST00000512229 LSP1P33241 339 aa13.66□□□□□ -0.22
PCDHA4-202ENST00000512229 ALDH7A1P49419 539 aaKnown RBP13.66□□□□□ -0.22
PCDHA4-202ENST00000512229 STX1BP61266 288 aa13.66□□□□□ -0.22
PCDHA4-202ENST00000512229 FMO1Q01740 532 aa13.66□□□□□ -0.22
PCDHA4-202ENST00000512229 SPIRE1Q08AE8 756 aa13.66□□□□□ -0.22
PCDHA4-202ENST00000512229 BFSP2Q13515 415 aa13.66□□□□□ -0.22
PCDHA4-202ENST00000512229 ANO4Q32M45 955 aa13.66□□□□□ -0.22
PCDHA4-202ENST00000512229 NOL9Q5SY16 702 aaKnown RBP13.66□□□□□ -0.22
PCDHA4-202ENST00000512229 EPN3Q9H201 632 aa13.66□□□□□ -0.22
PCDHA4-202ENST00000512229 G3BP2Q9UN86 482 aaKnown RBP13.66□□□□□ -0.22
PCDHA4-202ENST00000512229 NUP98P52948 1817 aa13.66□□□□□ -0.22
PCDHA4-202ENST00000512229 NOL4O94818 638 aa13.66□□□□□ -0.22
PCDHA4-202ENST00000512229 MICAL2O94851 1124 aa13.66□□□□□ -0.22
PCDHA4-202ENST00000512229 BAG2O95816 211 aa13.66□□□□□ -0.22
PCDHA4-202ENST00000512229 TAC1P20366 129 aa13.66□□□□□ -0.22
PCDHA4-202ENST00000512229 SLC8A1P32418 973 aa13.66□□□□□ -0.22
PCDHA4-202ENST00000512229 FAXCQ5TGI0 409 aa13.66□□□□□ -0.22
PCDHA4-202ENST00000512229 SLFN11Q7Z7L1 901 aa13.66□□□□□ -0.22
PCDHA4-202ENST00000512229 HASPINQ8TF76 798 aa13.66□□□□□ -0.22
PCDHA4-202ENST00000512229 PPP1R13LQ8WUF5 828 aa13.66□□□□□ -0.22
PCDHA4-202ENST00000512229 GRAMD1AQ96CP6 724 aa13.66□□□□□ -0.22
PCDHA4-202ENST00000512229 L3MBTL3Q96JM7 780 aaPredicted RBP13.66□□□□□ -0.22
PCDHA4-202ENST00000512229 FAM84AQ96KN4 292 aa13.66□□□□□ -0.22
PCDHA4-202ENST00000512229 LRRC37BQ96QE4 947 aa13.66□□□□□ -0.22
PCDHA4-202ENST00000512229 SYT15Q9BQS2 421 aa13.66□□□□□ -0.22
PCDHA4-202ENST00000512229 NIFKQ9BYG3 293 aaKnown RBP13.66□□□□□ -0.22
PCDHA4-202ENST00000512229 DSEQ9UL01 958 aa13.66□□□□□ -0.22
PCDHA4-202ENST00000512229 HES2Q9Y543 173 aa13.66□□□□□ -0.22
PCDHA4-202ENST00000512229 A0A1B0GUA9 196 aa13.66□□□□□ -0.22
PCDHA4-202ENST00000512229 TCP11X1B4DZS4 312 aa13.66□□□□□ -0.22
PCDHA4-202ENST00000512229 ACAT1P24752 427 aaKnown RBP13.66□□□□□ -0.22
PCDHA4-202ENST00000512229 NFKBIAP25963 317 aa13.66□□□□□ -0.22
PCDHA4-202ENST00000512229 CALRP27797 417 aaKnown RBP13.66□□□□□ -0.22
PCDHA4-202ENST00000512229 MAP3K7CLP57077 242 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms