RNA–Protein interactions for RNA: ENST00000512151.5

NUP54-211, Transcript of nucleoporin 54, humanhuman

TSL 2

Gene NUP54, Length 1,385 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-211ENST00000512151 FNDC3AQ9Y2H6 1198 aaKnown RBP9.89□□□□□ -0.83
NUP54-211ENST00000512151 MYOFQ9NZM1 2061 aa9.89□□□□□ -0.83
NUP54-211ENST00000512151 ATMQ13315 3056 aa9.88□□□□□ -0.83
NUP54-211ENST00000512151 HAPLN1P10915 354 aaPredicted RBP9.88□□□□□ -0.83
NUP54-211ENST00000512151 HARSP12081 509 aaKnown RBP9.88□□□□□ -0.83
NUP54-211ENST00000512151 XRCC6P12956 609 aaKnown RBP eCLIP9.88□□□□□ -0.83
NUP54-211ENST00000512151 TYMPP19971 482 aa9.88□□□□□ -0.83
NUP54-211ENST00000512151 PROZP22891 400 aa9.88□□□□□ -0.83
NUP54-211ENST00000512151 LRPAP1P30533 357 aa9.88□□□□□ -0.83
NUP54-211ENST00000512151 TUFMP49411 452 aaKnown RBP9.88□□□□□ -0.83
NUP54-211ENST00000512151 ZXDBP98169 803 aa9.88□□□□□ -0.83
NUP54-211ENST00000512151 FAM160A1Q05DH4 1040 aa9.88□□□□□ -0.83
NUP54-211ENST00000512151 SLC36A4Q6YBV0 504 aa9.88□□□□□ -0.83
NUP54-211ENST00000512151 GALNT15Q8N3T1 639 aa9.88□□□□□ -0.83
NUP54-211ENST00000512151 SH3RF2Q8TEC5 729 aa9.88□□□□□ -0.83
NUP54-211ENST00000512151 ERLEC1Q96DZ1 483 aa9.88□□□□□ -0.83
NUP54-211ENST00000512151 ZBTB45Q96K62 511 aaPredicted RBP9.88□□□□□ -0.83
NUP54-211ENST00000512151 TARS2Q9BW92 718 aaKnown RBP9.88□□□□□ -0.83
NUP54-211ENST00000512151 ZCWPW1Q9H0M4 648 aa9.88□□□□□ -0.83
NUP54-211ENST00000512151 HCN2Q9UL51 889 aa9.88□□□□□ -0.83
NUP54-211ENST00000512151 B8ZZF3 427 aa9.88□□□□□ -0.83
NUP54-211ENST00000512151 WNT7AO00755 349 aa9.88□□□□□ -0.83
NUP54-211ENST00000512151 CILPO75339 1184 aa9.88□□□□□ -0.83
NUP54-211ENST00000512151 MED24O75448 989 aa9.88□□□□□ -0.83
NUP54-211ENST00000512151 CYP17A1P05093 508 aa9.88□□□□□ -0.83
NUP54-211ENST00000512151 MCF2P10911 925 aa9.88□□□□□ -0.83
NUP54-211ENST00000512151 HLA-EP13747 358 aa9.88□□□□□ -0.83
NUP54-211ENST00000512151 CYP11B2P19099 503 aa9.88□□□□□ -0.83
NUP54-211ENST00000512151 SEMG2Q02383 582 aa9.88□□□□□ -0.83
NUP54-211ENST00000512151 NR1H3Q13133 447 aa9.88□□□□□ -0.83
NUP54-211ENST00000512151 TAF12Q16514 161 aa9.88□□□□□ -0.83
NUP54-211ENST00000512151 CCDC157Q569K6 752 aa9.88□□□□□ -0.83
NUP54-211ENST00000512151 EOGTQ5NDL2 527 aa9.88□□□□□ -0.83
NUP54-211ENST00000512151 ARMCX5Q6P1M9 558 aa9.88□□□□□ -0.83
NUP54-211ENST00000512151 PADI6Q6TGC4 694 aa9.88□□□□□ -0.83
NUP54-211ENST00000512151 DHRS13Q6UX07 377 aa9.88□□□□□ -0.83
NUP54-211ENST00000512151 DSTYKQ6XUX3 929 aa9.88□□□□□ -0.83
NUP54-211ENST00000512151 DBX2Q6ZNG2 339 aa9.88□□□□□ -0.83
NUP54-211ENST00000512151 LRRC69Q6ZNQ3 347 aa9.88□□□□□ -0.83
NUP54-211ENST00000512151 PIK3AP1Q6ZUJ8 805 aa9.88□□□□□ -0.83
NUP54-211ENST00000512151 APBB1IPQ7Z5R6 666 aaPredicted RBP9.88□□□□□ -0.83
NUP54-211ENST00000512151 SLFN12Q8IYM2 578 aa9.88□□□□□ -0.83
NUP54-211ENST00000512151 RGL4Q8IZJ4 473 aa9.88□□□□□ -0.83
NUP54-211ENST00000512151 MRPS31Q92665 395 aaKnown RBP9.88□□□□□ -0.83
NUP54-211ENST00000512151 ZNF419Q96HQ0 510 aaPredicted RBP9.88□□□□□ -0.83
NUP54-211ENST00000512151 NACC1Q96RE7 527 aa9.88□□□□□ -0.83
NUP54-211ENST00000512151 TRPC7Q9HCX4 862 aa9.88□□□□□ -0.83
NUP54-211ENST00000512151 GCNT4Q9P109 453 aa9.88□□□□□ -0.83
NUP54-211ENST00000512151 MAGED2Q9UNF1 606 aaPredicted RBP9.88□□□□□ -0.83
NUP54-211ENST00000512151 CYP8B1Q9UNU6 501 aa9.88□□□□□ -0.83
NUP54-211ENST00000512151 ANAPC1Q9H1A4 1944 aa9.87□□□□□ -0.83
NUP54-211ENST00000512151 CAPN8A6NHC0 703 aa9.87□□□□□ -0.83
NUP54-211ENST00000512151 ERVH48-1M5A8F1 160 aa9.87□□□□□ -0.83
NUP54-211ENST00000512151 EIF5BO60841 1220 aaKnown RBP9.87□□□□□ -0.83
NUP54-211ENST00000512151 KAT7O95251 611 aa9.87□□□□□ -0.83
NUP54-211ENST00000512151 PDIA3P30101 505 aaKnown RBP9.87□□□□□ -0.83
NUP54-211ENST00000512151 EFNA5P52803 228 aa9.87□□□□□ -0.83
NUP54-211ENST00000512151 TLE3Q04726 772 aa9.87□□□□□ -0.83
NUP54-211ENST00000512151 KDSRQ06136 332 aa9.87□□□□□ -0.83
NUP54-211ENST00000512151 LY6DQ14210 128 aa9.87□□□□□ -0.83
NUP54-211ENST00000512151 ZBTB6Q15916 424 aa9.87□□□□□ -0.83
NUP54-211ENST00000512151 PTPRNQ16849 979 aa9.87□□□□□ -0.83
NUP54-211ENST00000512151 HSF5Q4G112 596 aaPredicted RBP9.87□□□□□ -0.83
NUP54-211ENST00000512151 TAF1BQ53T94 588 aaPredicted RBP9.87□□□□□ -0.83
NUP54-211ENST00000512151 COLEC12Q5KU26 742 aa9.87□□□□□ -0.83
NUP54-211ENST00000512151 RNF20Q5VTR2 975 aa9.87□□□□□ -0.83
NUP54-211ENST00000512151 CATSPER3Q86XQ3 398 aa9.87□□□□□ -0.83
NUP54-211ENST00000512151 PHTF2Q8N3S3 785 aa9.87□□□□□ -0.83
NUP54-211ENST00000512151 ARL14EPQ8N8R7 260 aaPredicted RBP9.87□□□□□ -0.83
NUP54-211ENST00000512151 RHBDD1Q8TEB9 315 aa9.87□□□□□ -0.83
NUP54-211ENST00000512151 SENP8Q96LD8 212 aa9.87□□□□□ -0.83
NUP54-211ENST00000512151 JAKMIP1Q96N16 626 aaKnown RBP9.87□□□□□ -0.83
NUP54-211ENST00000512151 SLC6A17Q9H1V8 727 aa9.87□□□□□ -0.83
NUP54-211ENST00000512151 GAREM1Q9H706 876 aa9.87□□□□□ -0.83
NUP54-211ENST00000512151 CD248Q9HCU0 757 aa9.87□□□□□ -0.83
NUP54-211ENST00000512151 TM7SF3Q9NS93 570 aa9.87□□□□□ -0.83
NUP54-211ENST00000512151 GJB4Q9NTQ9 266 aa9.87□□□□□ -0.83
NUP54-211ENST00000512151 TMLHEQ9NVH6 421 aa9.87□□□□□ -0.83
NUP54-211ENST00000512151 PCDHA12Q9UN75 941 aa9.87□□□□□ -0.83
NUP54-211ENST00000512151 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.87□□□□□ -0.83
NUP54-211ENST00000512151 MYO9AB2RTY4 2548 aa9.87□□□□□ -0.83
NUP54-211ENST00000512151 A0A0A0MRY4 1105 aa9.86□□□□□ -0.83
NUP54-211ENST00000512151 A0A1W2PQF6 199 aa9.86□□□□□ -0.83
NUP54-211ENST00000512151 C2orf78A6NCI8 922 aa9.86□□□□□ -0.83
NUP54-211ENST00000512151 E9PAM4 449 aa9.86□□□□□ -0.83
NUP54-211ENST00000512151 K7ERI5 159 aa9.86□□□□□ -0.83
NUP54-211ENST00000512151 SCAMP3O14828 347 aaKnown RBP9.86□□□□□ -0.83
NUP54-211ENST00000512151 DTNBO60941 627 aa9.86□□□□□ -0.83
NUP54-211ENST00000512151 BAG4O95429 457 aaKnown RBP9.86□□□□□ -0.83
NUP54-211ENST00000512151 NFATC1O95644 943 aa9.86□□□□□ -0.83
NUP54-211ENST00000512151 USP17L7P0C7H9 530 aa9.86□□□□□ -0.83
NUP54-211ENST00000512151 ZNF883P0CG24 379 aa9.86□□□□□ -0.83
NUP54-211ENST00000512151 CXCL8P10145 99 aa9.86□□□□□ -0.83
NUP54-211ENST00000512151 WASP42768 502 aa9.86□□□□□ -0.83
NUP54-211ENST00000512151 ANAPC15P60006 121 aa9.86□□□□□ -0.83
NUP54-211ENST00000512151 CXADRP78310 365 aa9.86□□□□□ -0.83
NUP54-211ENST00000512151 SSRP1Q08945 709 aaKnown RBP9.86□□□□□ -0.83
NUP54-211ENST00000512151 PPP2R5AQ15172 486 aa9.86□□□□□ -0.83
NUP54-211ENST00000512151 GALNT17Q6IS24 598 aa9.86□□□□□ -0.83
NUP54-211ENST00000512151 MIB1Q86YT6 1006 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms