RNA–Protein interactions for RNA: ENST00000511409.1

TRAPPC11-207, Transcript of trafficking protein particle complex 11, humanhuman

TSL 4

Gene TRAPPC11, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-207ENST00000511409 TUBA3CQ13748 450 aa4.08□□□□□ -1.76
TRAPPC11-207ENST00000511409 TRIM14Q14142 442 aa4.08□□□□□ -1.76
TRAPPC11-207ENST00000511409 SLC35G1Q2M3R5 365 aa4.08□□□□□ -1.76
TRAPPC11-207ENST00000511409 LSM12Q3MHD2 195 aaKnown RBP4.08□□□□□ -1.76
TRAPPC11-207ENST00000511409 MIIPQ5JXC2 388 aa4.08□□□□□ -1.76
TRAPPC11-207ENST00000511409 DGKKQ5KSL6 1271 aa4.08□□□□□ -1.76
TRAPPC11-207ENST00000511409 VPS53Q5VIR6 699 aa4.08□□□□□ -1.76
TRAPPC11-207ENST00000511409 SPATA31A3Q5VYP0 1347 aa4.08□□□□□ -1.76
TRAPPC11-207ENST00000511409 SP5Q6BEB4 398 aaPredicted RBP4.08□□□□□ -1.76
TRAPPC11-207ENST00000511409 SFRP4Q6FHJ7 346 aaPredicted RBP4.08□□□□□ -1.76
TRAPPC11-207ENST00000511409 GGT6Q6P531 493 aa4.08□□□□□ -1.76
TRAPPC11-207ENST00000511409 TUBA3EQ6PEY2 450 aa4.08□□□□□ -1.76
TRAPPC11-207ENST00000511409 KCTD20Q7Z5Y7 419 aa4.08□□□□□ -1.76
TRAPPC11-207ENST00000511409 SLC15A3Q8IY34 581 aa4.08□□□□□ -1.76
TRAPPC11-207ENST00000511409 SPARTQ8N0X7 666 aa4.08□□□□□ -1.76
TRAPPC11-207ENST00000511409 FANCBQ8NB91 859 aa4.08□□□□□ -1.76
TRAPPC11-207ENST00000511409 B3GALNT2Q8NCR0 500 aa4.08□□□□□ -1.76
TRAPPC11-207ENST00000511409 SLC30A5Q8TAD4 765 aa4.08□□□□□ -1.76
TRAPPC11-207ENST00000511409 PROKR1Q8TCW9 393 aa4.08□□□□□ -1.76
TRAPPC11-207ENST00000511409 CACTINQ8WUQ7 758 aaKnown RBP4.08□□□□□ -1.76
TRAPPC11-207ENST00000511409 ADAM2Q99965 735 aa4.08□□□□□ -1.76
TRAPPC11-207ENST00000511409 ACTRT3Q9BYD9 372 aa4.08□□□□□ -1.76
TRAPPC11-207ENST00000511409 ZNF341Q9BYN7 854 aa4.08□□□□□ -1.76
TRAPPC11-207ENST00000511409 MYH16Q9H6N6 1097 aa4.08□□□□□ -1.76
TRAPPC11-207ENST00000511409 CXorf36Q9H7Y0 433 aa4.08□□□□□ -1.76
TRAPPC11-207ENST00000511409 CASS4Q9NQ75 786 aa4.08□□□□□ -1.76
TRAPPC11-207ENST00000511409 HEYLQ9NQ87 328 aaPredicted RBP4.08□□□□□ -1.76
TRAPPC11-207ENST00000511409 XPNPEP3Q9NQH7 507 aa4.08□□□□□ -1.76
TRAPPC11-207ENST00000511409 TRMT13Q9NUP7 481 aaKnown RBP4.08□□□□□ -1.76
TRAPPC11-207ENST00000511409 TMEM74BQ9NUR3 256 aa4.08□□□□□ -1.76
TRAPPC11-207ENST00000511409 NDRG4Q9ULP0 352 aaKnown RBP4.08□□□□□ -1.76
TRAPPC11-207ENST00000511409 FZD1Q9UP38 647 aa4.08□□□□□ -1.76
TRAPPC11-207ENST00000511409 UTP18Q9Y5J1 556 aaKnown RBP eCLIP4.08□□□□□ -1.76
TRAPPC11-207ENST00000511409 CENPVL1A0A0U1RR11 272 aa4.07□□□□□ -1.76
TRAPPC11-207ENST00000511409 PODXLO00592 558 aa4.07□□□□□ -1.76
TRAPPC11-207ENST00000511409 CCP110O43303 1012 aa4.07□□□□□ -1.76
TRAPPC11-207ENST00000511409 SRGAP2O75044 1071 aa4.07□□□□□ -1.76
TRAPPC11-207ENST00000511409 PIAS2O75928 621 aa4.07□□□□□ -1.76
TRAPPC11-207ENST00000511409 NDST3O95803 873 aa4.07□□□□□ -1.76
TRAPPC11-207ENST00000511409 IDEP14735 1019 aa4.07□□□□□ -1.76
TRAPPC11-207ENST00000511409 PPP3CBP16298 524 aa4.07□□□□□ -1.76
TRAPPC11-207ENST00000511409 TACR2P21452 398 aa4.07□□□□□ -1.76
TRAPPC11-207ENST00000511409 ZFP36P26651 326 aaKnown RBP4.07□□□□□ -1.76
TRAPPC11-207ENST00000511409 TRAPPC10P48553 1259 aa4.07□□□□□ -1.76
TRAPPC11-207ENST00000511409 DGKEP52429 567 aa4.07□□□□□ -1.76
TRAPPC11-207ENST00000511409 EIF2B5Q13144 721 aaKnown RBP4.07□□□□□ -1.76
TRAPPC11-207ENST00000511409 FOXE3Q13461 319 aa4.07□□□□□ -1.76
TRAPPC11-207ENST00000511409 KCNAB1Q14722 419 aa4.07□□□□□ -1.76
TRAPPC11-207ENST00000511409 SF3B3Q15393 1217 aaKnown RBP4.07□□□□□ -1.76
TRAPPC11-207ENST00000511409 ELF2Q15723 593 aa4.07□□□□□ -1.76
TRAPPC11-207ENST00000511409 MPEG1Q2M385 716 aa4.07□□□□□ -1.76
TRAPPC11-207ENST00000511409 GRAMD1BQ3KR37 738 aa4.07□□□□□ -1.76
TRAPPC11-207ENST00000511409 ZIK1Q3SY52 487 aaPredicted RBP4.07□□□□□ -1.76
TRAPPC11-207ENST00000511409 DEPDC1Q5TB30 811 aa4.07□□□□□ -1.76
TRAPPC11-207ENST00000511409 ICE2Q659A1 982 aa4.07□□□□□ -1.76
TRAPPC11-207ENST00000511409 PLAG1Q6DJT9 500 aa4.07□□□□□ -1.76
TRAPPC11-207ENST00000511409 CATSPERGQ6ZRH7 1159 aa4.07□□□□□ -1.76
TRAPPC11-207ENST00000511409 TMPRSS9Q7Z410 1059 aa4.07□□□□□ -1.76
TRAPPC11-207ENST00000511409 EXOC8Q8IYI6 725 aa4.07□□□□□ -1.76
TRAPPC11-207ENST00000511409 TOR1AIP2Q8NFQ8 470 aa4.07□□□□□ -1.76
TRAPPC11-207ENST00000511409 DNAJB14Q8TBM8 379 aa4.07□□□□□ -1.76
TRAPPC11-207ENST00000511409 TMEM171Q8WVE6 324 aa4.07□□□□□ -1.76
TRAPPC11-207ENST00000511409 MUL1Q969V5 352 aa4.07□□□□□ -1.76
TRAPPC11-207ENST00000511409 FAM136AQ96C01 138 aa4.07□□□□□ -1.76
TRAPPC11-207ENST00000511409 ZNF503Q96F45 646 aa4.07□□□□□ -1.76
TRAPPC11-207ENST00000511409 OSBPL9Q96SU4 736 aa4.07□□□□□ -1.76
TRAPPC11-207ENST00000511409 NELL2Q99435 816 aa4.07□□□□□ -1.76
TRAPPC11-207ENST00000511409 ZNF747Q9BV97 191 aa4.07□□□□□ -1.76
TRAPPC11-207ENST00000511409 WDR12Q9GZL7 423 aaKnown RBP4.07□□□□□ -1.76
TRAPPC11-207ENST00000511409 GBA2Q9HCG7 927 aaPredicted RBP4.07□□□□□ -1.76
TRAPPC11-207ENST00000511409 PTPRHQ9HD43 1115 aa4.07□□□□□ -1.76
TRAPPC11-207ENST00000511409 CDY1Q9Y6F8 540 aa4.07□□□□□ -1.76
TRAPPC11-207ENST00000511409 TMEM200CA6NKL6 621 aa4.06□□□□□ -1.76
TRAPPC11-207ENST00000511409 AQP7P3A6NL99 342 aa4.06□□□□□ -1.76
TRAPPC11-207ENST00000511409 HNRNPDLO14979 420 aaKnown RBP4.06□□□□□ -1.76
TRAPPC11-207ENST00000511409 AREL1O15033 823 aa4.06□□□□□ -1.76
TRAPPC11-207ENST00000511409 ADAMTS3O15072 1205 aa4.06□□□□□ -1.76
TRAPPC11-207ENST00000511409 PPM1DO15297 605 aa4.06□□□□□ -1.76
TRAPPC11-207ENST00000511409 RRP9O43818 475 aaKnown RBP4.06□□□□□ -1.76
TRAPPC11-207ENST00000511409 PEX11BO96011 259 aa4.06□□□□□ -1.76
TRAPPC11-207ENST00000511409 A1BGP04217 495 aa4.06□□□□□ -1.76
TRAPPC11-207ENST00000511409 KCNA3P22001 575 aa4.06□□□□□ -1.76
TRAPPC11-207ENST00000511409 YY1P25490 414 aa4.06□□□□□ -1.76
TRAPPC11-207ENST00000511409 ADORA2AP29274 412 aa4.06□□□□□ -1.76
TRAPPC11-207ENST00000511409 PPIFP30405 207 aaKnown RBP4.06□□□□□ -1.76
TRAPPC11-207ENST00000511409 PRKAR1BP31321 381 aa4.06□□□□□ -1.76
TRAPPC11-207ENST00000511409 ACVRL1P37023 503 aa4.06□□□□□ -1.76
TRAPPC11-207ENST00000511409 IL6STP40189 918 aaPredicted RBP4.06□□□□□ -1.76
TRAPPC11-207ENST00000511409 PTPAQ15257 358 aa4.06□□□□□ -1.76
TRAPPC11-207ENST00000511409 NPY5RQ15761 445 aa4.06□□□□□ -1.76
TRAPPC11-207ENST00000511409 PTCHD3Q3KNS1 767 aa4.06□□□□□ -1.76
TRAPPC11-207ENST00000511409 LY6G5CQ5SRR4 150 aa4.06□□□□□ -1.76
TRAPPC11-207ENST00000511409 FAM83BQ5T0W9 1011 aa4.06□□□□□ -1.76
TRAPPC11-207ENST00000511409 PGBD2Q6P3X8 592 aa4.06□□□□□ -1.76
TRAPPC11-207ENST00000511409 CRTC1Q6UUV9 634 aa4.06□□□□□ -1.76
TRAPPC11-207ENST00000511409 TSHZ1Q6ZSZ6 1077 aa4.06□□□□□ -1.76
TRAPPC11-207ENST00000511409 GPR149Q86SP6 731 aa4.06□□□□□ -1.76
TRAPPC11-207ENST00000511409 ARHGEF19Q8IW93 802 aa4.06□□□□□ -1.76
TRAPPC11-207ENST00000511409 Q8N1X5 172 aa4.06□□□□□ -1.76
TRAPPC11-207ENST00000511409 LCORLQ8N3X6 602 aa4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms