RNA–Protein interactions for RNA: ENST00000510866.5

KDM3B-207, Transcript of lysine demethylase 3B, humanhuman

TSL 1 (best)

Gene KDM3B, Length 6,324 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-207ENST00000510866 FAM71DQ8N9W8 422 aa7.46□□□□□ -1.21
KDM3B-207ENST00000510866 CD99L2Q8TCZ2 262 aa7.46□□□□□ -1.21
KDM3B-207ENST00000510866 FAM172AQ8WUF8 416 aa7.46□□□□□ -1.21
KDM3B-207ENST00000510866 SNX12Q9UMY4 172 aa7.46□□□□□ -1.21
KDM3B-207ENST00000510866 TRIM33Q9UPN9 1127 aa7.46□□□□□ -1.21
KDM3B-207ENST00000510866 SALL3Q9BXA9 1300 aa7.46□□□□□ -1.21
KDM3B-207ENST00000510866 PARP4Q9UKK3 1724 aaKnown RBP7.46□□□□□ -1.21
KDM3B-207ENST00000510866 DIAPH2O60879 1101 aa7.46□□□□□ -1.21
KDM3B-207ENST00000510866 F9P00740 461 aa7.46□□□□□ -1.21
KDM3B-207ENST00000510866 CYP3A4P08684 503 aa7.46□□□□□ -1.21
KDM3B-207ENST00000510866 ELNP15502 786 aa7.46□□□□□ -1.21
KDM3B-207ENST00000510866 CYP11B1P15538 503 aa7.46□□□□□ -1.21
KDM3B-207ENST00000510866 HMOX2P30519 316 aa7.46□□□□□ -1.21
KDM3B-207ENST00000510866 FLT3LGP49771 235 aa7.46□□□□□ -1.21
KDM3B-207ENST00000510866 LIG3P49916 1009 aa7.46□□□□□ -1.21
KDM3B-207ENST00000510866 USP10Q14694 798 aaKnown RBP7.46□□□□□ -1.21
KDM3B-207ENST00000510866 SLC39A12Q504Y0 691 aa7.46□□□□□ -1.21
KDM3B-207ENST00000510866 BOLA3Q53S33 107 aa7.46□□□□□ -1.21
KDM3B-207ENST00000510866 RASIP1Q5U651 963 aa7.46□□□□□ -1.21
KDM3B-207ENST00000510866 FAM47EQ6ZV65 393 aa7.46□□□□□ -1.21
KDM3B-207ENST00000510866 CAPNS2Q96L46 248 aa7.46□□□□□ -1.21
KDM3B-207ENST00000510866 SENP1Q9P0U3 644 aa7.46□□□□□ -1.21
KDM3B-207ENST00000510866 SNCAIPQ9Y6H5 919 aa7.46□□□□□ -1.21
KDM3B-207ENST00000510866 MROH7Q68CQ1 1323 aa7.46□□□□□ -1.21
KDM3B-207ENST00000510866 EML1O00423 815 aa7.46□□□□□ -1.22
KDM3B-207ENST00000510866 GYPCP04921 128 aa7.46□□□□□ -1.22
KDM3B-207ENST00000510866 MAGOHP61326 146 aaKnown RBP7.46□□□□□ -1.22
KDM3B-207ENST00000510866 EARS2Q5JPH6 523 aaKnown RBP7.46□□□□□ -1.22
KDM3B-207ENST00000510866 CCDC60Q8IWA6 550 aaPredicted RBP7.46□□□□□ -1.22
KDM3B-207ENST00000510866 AGR3Q8TD06 166 aa7.46□□□□□ -1.22
KDM3B-207ENST00000510866 NFASCO94856 1347 aa7.46□□□□□ -1.22
KDM3B-207ENST00000510866 YDJCA8MPS7 323 aa7.46□□□□□ -1.22
KDM3B-207ENST00000510866 PMPCBO75439 489 aa7.46□□□□□ -1.22
KDM3B-207ENST00000510866 DNAJC8O75937 253 aaPredicted RBP7.46□□□□□ -1.22
KDM3B-207ENST00000510866 RPSAP08865 295 aaKnown RBP7.46□□□□□ -1.22
KDM3B-207ENST00000510866 CTNNB1P35222 781 aa7.46□□□□□ -1.22
KDM3B-207ENST00000510866 PPP3CCP48454 512 aa7.46□□□□□ -1.22
KDM3B-207ENST00000510866 PTPN11Q06124 597 aaPredicted RBP7.46□□□□□ -1.22
KDM3B-207ENST00000510866 COBLL1Q53SF7 1204 aa7.46□□□□□ -1.22
KDM3B-207ENST00000510866 REM2Q8IYK8 340 aaPredicted RBP7.46□□□□□ -1.22
KDM3B-207ENST00000510866 ERGIC2Q96RQ1 377 aa7.46□□□□□ -1.22
KDM3B-207ENST00000510866 FAM96AQ9H5X1 160 aa7.46□□□□□ -1.22
KDM3B-207ENST00000510866 GPATCH2LQ9NWQ4 482 aa7.46□□□□□ -1.22
KDM3B-207ENST00000510866 CD274Q9NZQ7 290 aa7.46□□□□□ -1.22
KDM3B-207ENST00000510866 BARX2Q9UMQ3 279 aaPredicted RBP7.46□□□□□ -1.22
KDM3B-207ENST00000510866 ALG6Q9Y672 507 aa7.46□□□□□ -1.22
KDM3B-207ENST00000510866 SUPT3HB4E1H0 165 aa7.46□□□□□ -1.22
KDM3B-207ENST00000510866 BTBD19C9JJ37 291 aa7.46□□□□□ -1.22
KDM3B-207ENST00000510866 ZBTB39O15060 712 aa7.46□□□□□ -1.22
KDM3B-207ENST00000510866 CYTH3O43739 400 aa7.46□□□□□ -1.22
KDM3B-207ENST00000510866 SUPT3HO75486 399 aa7.46□□□□□ -1.22
KDM3B-207ENST00000510866 DDHD2O94830 711 aa7.46□□□□□ -1.22
KDM3B-207ENST00000510866 LUC7L3O95232 432 aaKnown RBP7.46□□□□□ -1.22
KDM3B-207ENST00000510866 MLH1P40692 756 aa7.46□□□□□ -1.22
KDM3B-207ENST00000510866 NDST1P52848 882 aa7.46□□□□□ -1.22
KDM3B-207ENST00000510866 CCDC33Q8N5R6 958 aa7.46□□□□□ -1.22
KDM3B-207ENST00000510866 SPATA4Q8NEY3 305 aa7.46□□□□□ -1.22
KDM3B-207ENST00000510866 CSGALNACT1Q8TDX6 532 aa7.46□□□□□ -1.22
KDM3B-207ENST00000510866 SPIRE2Q8WWL2 714 aa7.46□□□□□ -1.22
KDM3B-207ENST00000510866 USP13Q92995 863 aaPredicted RBP7.46□□□□□ -1.22
KDM3B-207ENST00000510866 FBXL5Q9UKA1 691 aa7.46□□□□□ -1.22
KDM3B-207ENST00000510866 NEU2Q9Y3R4 380 aa7.46□□□□□ -1.22
KDM3B-207ENST00000510866 TSPAN3O60637 253 aa7.45□□□□□ -1.22
KDM3B-207ENST00000510866 USP2O75604 605 aaPredicted RBP7.45□□□□□ -1.22
KDM3B-207ENST00000510866 ANXA9O76027 345 aa7.45□□□□□ -1.22
KDM3B-207ENST00000510866 HMGCRP04035 888 aa7.45□□□□□ -1.22
KDM3B-207ENST00000510866 DDX5P17844 614 aaKnown RBP7.45□□□□□ -1.22
KDM3B-207ENST00000510866 CSE1LP55060 971 aaKnown RBP7.45□□□□□ -1.22
KDM3B-207ENST00000510866 TMEM119Q4V9L6 283 aa7.45□□□□□ -1.22
KDM3B-207ENST00000510866 NAPEPLDQ6IQ20 393 aa7.45□□□□□ -1.22
KDM3B-207ENST00000510866 CALML6Q8TD86 181 aa7.45□□□□□ -1.22
KDM3B-207ENST00000510866 SMARCD1Q96GM5 515 aa7.45□□□□□ -1.22
KDM3B-207ENST00000510866 ELAC2Q9BQ52 826 aaKnown RBP7.45□□□□□ -1.22
KDM3B-207ENST00000510866 APOL5Q9BWW9 433 aa7.45□□□□□ -1.22
KDM3B-207ENST00000510866 FBXO44Q9H4M3 255 aa7.45□□□□□ -1.22
KDM3B-207ENST00000510866 MRPL17Q9NRX2 175 aaKnown RBP7.45□□□□□ -1.22
KDM3B-207ENST00000510866 PLA2G4CQ9UP65 541 aa7.45□□□□□ -1.22
KDM3B-207ENST00000510866 ROBO1Q9Y6N7 1651 aa7.45□□□□□ -1.22
KDM3B-207ENST00000510866 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP7.45□□□□□ -1.22
KDM3B-207ENST00000510866 BRAFP15056 766 aa7.45□□□□□ -1.22
KDM3B-207ENST00000510866 GEMP55040 296 aa7.45□□□□□ -1.22
KDM3B-207ENST00000510866 UGP2Q16851 508 aa7.45□□□□□ -1.22
KDM3B-207ENST00000510866 TIGD7Q6NT04 549 aaPredicted RBP7.45□□□□□ -1.22
KDM3B-207ENST00000510866 SLC47A2Q86VL8 602 aa7.45□□□□□ -1.22
KDM3B-207ENST00000510866 VSIG10LQ86VR7 867 aa7.45□□□□□ -1.22
KDM3B-207ENST00000510866 PALB2Q86YC2 1186 aa7.45□□□□□ -1.22
KDM3B-207ENST00000510866 UNC45BQ8IWX7 931 aa7.45□□□□□ -1.22
KDM3B-207ENST00000510866 BLOC1S5Q8TDH9 187 aa7.45□□□□□ -1.22
KDM3B-207ENST00000510866 PIK3R5Q8WYR1 880 aa7.45□□□□□ -1.22
KDM3B-207ENST00000510866 ZNF558Q96NG5 402 aa7.45□□□□□ -1.22
KDM3B-207ENST00000510866 EIF2AQ9BY44 585 aaKnown RBP7.45□□□□□ -1.22
KDM3B-207ENST00000510866 OLFML3Q9NRN5 406 aa7.45□□□□□ -1.22
KDM3B-207ENST00000510866 SCHIP1Q9P0W5 487 aaPredicted RBP7.45□□□□□ -1.22
KDM3B-207ENST00000510866 CHMP2BQ9UQN3 213 aa7.45□□□□□ -1.22
KDM3B-207ENST00000510866 STX7O15400 261 aaKnown RBP7.45□□□□□ -1.22
KDM3B-207ENST00000510866 PSTPIP1O43586 416 aa7.45□□□□□ -1.22
KDM3B-207ENST00000510866 KDM1AO60341 852 aa7.45□□□□□ -1.22
KDM3B-207ENST00000510866 PTGER2P43116 358 aa7.45□□□□□ -1.22
KDM3B-207ENST00000510866 SNCBQ16143 134 aa7.45□□□□□ -1.22
KDM3B-207ENST00000510866 PPP4R4Q6NUP7 873 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms