RNA–Protein interactions for RNA: ENST00000510626.5

HTT-208, Transcript of huntingtin, humanhuman

TSL 1 (best)

Gene HTT, Length 14,438 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-208ENST00000510626 NLRP4Q96MN2 994 aa8.68□□□□□ -1.02
HTT-208ENST00000510626 GREM2Q9H772 168 aa8.68□□□□□ -1.02
HTT-208ENST00000510626 TBCCD1Q9NVR7 557 aa8.68□□□□□ -1.02
HTT-208ENST00000510626 CYP2D7A0A087X1C5 515 aa8.68□□□□□ -1.02
HTT-208ENST00000510626 PLK4O00444 970 aa8.68□□□□□ -1.02
HTT-208ENST00000510626 GAS2O43903 313 aaKnown RBP8.68□□□□□ -1.02
HTT-208ENST00000510626 FKBP9O95302 570 aa8.68□□□□□ -1.02
HTT-208ENST00000510626 CD58P19256 250 aa8.68□□□□□ -1.02
HTT-208ENST00000510626 CCNA2P20248 432 aa8.68□□□□□ -1.02
HTT-208ENST00000510626 FXR2P51116 673 aaKnown RBP eCLIP8.68□□□□□ -1.022e-6■■■■□ 24.3
HTT-208ENST00000510626 DNAJC3Q13217 504 aa8.68□□□□□ -1.02
HTT-208ENST00000510626 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.68□□□□□ -1.02
HTT-208ENST00000510626 ZFAND2BQ8WV99 257 aa8.68□□□□□ -1.02
HTT-208ENST00000510626 SERHL2Q9H4I8 314 aa8.68□□□□□ -1.02
HTT-208ENST00000510626 SERHLQ9NQF3 203 aa8.68□□□□□ -1.02
HTT-208ENST00000510626 ZMYM2Q9UBW7 1377 aa8.68□□□□□ -1.02
HTT-208ENST00000510626 MAGEA10P43363 369 aaPredicted RBP8.68□□□□□ -1.02
HTT-208ENST00000510626 SUPT20HL1Q3ZLR7 823 aa8.68□□□□□ -1.02
HTT-208ENST00000510626 NET1Q7Z628 596 aaPredicted RBP8.68□□□□□ -1.02
HTT-208ENST00000510626 WDR36Q8NI36 951 aaKnown RBP8.68□□□□□ -1.02
HTT-208ENST00000510626 DCUN1D1Q96GG9 259 aa8.68□□□□□ -1.02
HTT-208ENST00000510626 CATSPERBQ9H7T0 1116 aa8.68□□□□□ -1.02
HTT-208ENST00000510626 ZSCAN9O15535 394 aaPredicted RBP8.68□□□□□ -1.02
HTT-208ENST00000510626 HIST1H2AGP0C0S8 130 aaPredicted RBP8.68□□□□□ -1.02
HTT-208ENST00000510626 TSHRP16473 764 aa8.68□□□□□ -1.02
HTT-208ENST00000510626 HIST1H2ADP20671 130 aa8.68□□□□□ -1.02
HTT-208ENST00000510626 TFDP3Q5H9I0 405 aa8.68□□□□□ -1.02
HTT-208ENST00000510626 HIST1H2AHQ96KK5 128 aa8.68□□□□□ -1.02
HTT-208ENST00000510626 HIST1H2AJQ99878 128 aa8.68□□□□□ -1.02
HTT-208ENST00000510626 H2AFJQ9BTM1 129 aa8.68□□□□□ -1.02
HTT-208ENST00000510626 NCK2O43639 380 aa8.67□□□□□ -1.02
HTT-208ENST00000510626 CAPN15O75808 1086 aa8.67□□□□□ -1.02
HTT-208ENST00000510626 ALADP13716 330 aa8.67□□□□□ -1.02
HTT-208ENST00000510626 AMER2Q8N7J2 671 aa8.67□□□□□ -1.02
HTT-208ENST00000510626 FAM45AQ8TCE6 357 aa8.67□□□□□ -1.02
HTT-208ENST00000510626 C11orf70Q9BRQ4 267 aa8.67□□□□□ -1.02
HTT-208ENST00000510626 SLC38A7Q9NVC3 462 aa8.67□□□□□ -1.02
HTT-208ENST00000510626 MYO1GB0I1T2 1018 aa8.67□□□□□ -1.02
HTT-208ENST00000510626 COG2Q14746 738 aa8.67□□□□□ -1.02
HTT-208ENST00000510626 FARP1Q9Y4F1 1045 aaPredicted RBP8.67□□□□□ -1.02
HTT-208ENST00000510626 UNC13BO14795 1591 aa8.67□□□□□ -1.02
HTT-208ENST00000510626 NEXMIFQ5QGS0 1516 aa8.67□□□□□ -1.02
HTT-208ENST00000510626 DGAT1O75907 488 aa8.67□□□□□ -1.02
HTT-208ENST00000510626 LARGE1O95461 756 aa8.67□□□□□ -1.02
HTT-208ENST00000510626 GARTP22102 1010 aa8.67□□□□□ -1.02
HTT-208ENST00000510626 ARHGAP17Q68EM7 881 aa8.67□□□□□ -1.02
HTT-208ENST00000510626 ZNF333Q96JL9 665 aa8.67□□□□□ -1.02
HTT-208ENST00000510626 DEPDC7Q96QD5 511 aa8.67□□□□□ -1.02
HTT-208ENST00000510626 METTL5Q9NRN9 209 aaKnown RBP8.67□□□□□ -1.02
HTT-208ENST00000510626 TMEM2Q9UHN6 1383 aa8.67□□□□□ -1.02
HTT-208ENST00000510626 MROH7-TTC4A0A0A0MT08 1334 aa8.67□□□□□ -1.02
HTT-208ENST00000510626 STX11O75558 287 aa8.67□□□□□ -1.02
HTT-208ENST00000510626 NT5DC1Q5TFE4 455 aa8.67□□□□□ -1.02
HTT-208ENST00000510626 PNPLA3Q9NST1 481 aa8.67□□□□□ -1.02
HTT-208ENST00000510626 LMCD1Q9NZU5 365 aa8.67□□□□□ -1.02
HTT-208ENST00000510626 CCDC59Q9P031 241 aaKnown RBP8.67□□□□□ -1.02
HTT-208ENST00000510626 TRIM49BA6NDI0 452 aa8.67□□□□□ -1.02
HTT-208ENST00000510626 RTN3O95197 1032 aaPredicted RBP8.67□□□□□ -1.02
HTT-208ENST00000510626 FASP25445 335 aa8.67□□□□□ -1.02
HTT-208ENST00000510626 NSUN2Q08J23 767 aaKnown RBP eCLIP8.67□□□□□ -1.02
HTT-208ENST00000510626 MAD2L1Q13257 205 aaPredicted RBP8.67□□□□□ -1.02
HTT-208ENST00000510626 MSLNQ13421 630 aaPredicted RBP8.67□□□□□ -1.02
HTT-208ENST00000510626 RASA2Q15283 850 aa8.67□□□□□ -1.02
HTT-208ENST00000510626 CCNG2Q16589 344 aa8.67□□□□□ -1.02
HTT-208ENST00000510626 MTDHQ86UE4 582 aaKnown RBP8.67□□□□□ -1.02
HTT-208ENST00000510626 RNF25Q96BH1 459 aaPredicted RBP8.67□□□□□ -1.02
HTT-208ENST00000510626 AP5M1Q9H0R1 490 aa8.67□□□□□ -1.02
HTT-208ENST00000510626 JAG2Q9Y219 1238 aa8.67□□□□□ -1.02
HTT-208ENST00000510626 HEATR9A2RTY3 570 aa8.67□□□□□ -1.02
HTT-208ENST00000510626 MAFGO15525 162 aa8.67□□□□□ -1.02
HTT-208ENST00000510626 RHOBTB1O94844 696 aa8.67□□□□□ -1.02
HTT-208ENST00000510626 NPTXRO95502 500 aa8.67□□□□□ -1.02
HTT-208ENST00000510626 SERPINE1P05121 402 aa8.67□□□□□ -1.02
HTT-208ENST00000510626 RAD51Q06609 339 aa8.67□□□□□ -1.02
HTT-208ENST00000510626 LRRC24Q50LG9 513 aa8.67□□□□□ -1.02
HTT-208ENST00000510626 KLHDC7AQ5VTJ3 777 aa8.67□□□□□ -1.02
HTT-208ENST00000510626 C1orf228Q6PIY5 440 aa8.67□□□□□ -1.02
HTT-208ENST00000510626 OR6P1Q8NGX9 317 aa8.67□□□□□ -1.02
HTT-208ENST00000510626 KCTD14Q9BQ13 255 aaPredicted RBP8.67□□□□□ -1.02
HTT-208ENST00000510626 PCMTD2Q9NV79 361 aa8.67□□□□□ -1.02
HTT-208ENST00000510626 DENND3A2RUS2 1198 aa8.67□□□□□ -1.02
HTT-208ENST00000510626 WEE2P0C1S8 567 aa8.67□□□□□ -1.02
HTT-208ENST00000510626 PDZK1Q5T2W1 519 aa8.67□□□□□ -1.02
HTT-208ENST00000510626 KCNB2Q92953 911 aa8.67□□□□□ -1.02
HTT-208ENST00000510626 COA1Q9GZY4 146 aa8.67□□□□□ -1.02
HTT-208ENST00000510626 CYP39A1Q9NYL5 469 aa8.67□□□□□ -1.02
HTT-208ENST00000510626 HEY2Q9UBP5 337 aa8.67□□□□□ -1.02
HTT-208ENST00000510626 SLC22A2O15244 555 aa8.67□□□□□ -1.02
HTT-208ENST00000510626 NDUFS3O75489 264 aa8.67□□□□□ -1.02
HTT-208ENST00000510626 RPLP2P05387 115 aaKnown RBP8.67□□□□□ -1.02
HTT-208ENST00000510626 CYP2C8P10632 490 aa8.67□□□□□ -1.02
HTT-208ENST00000510626 GCLMP48507 274 aa8.67□□□□□ -1.02
HTT-208ENST00000510626 PRKAA1Q13131 559 aa8.67□□□□□ -1.02
HTT-208ENST00000510626 PNMA3Q9UL41 463 aa8.67□□□□□ -1.02
HTT-208ENST00000510626 MZT2BQ6NZ67 158 aa8.67□□□□□ -1.02
HTT-208ENST00000510626 CDC73Q6P1J9 531 aa8.67□□□□□ -1.02
HTT-208ENST00000510626 APOL6Q9BWW8 343 aa8.67□□□□□ -1.02
HTT-208ENST00000510626 ANKZF1Q9H8Y5 726 aa8.67□□□□□ -1.02
HTT-208ENST00000510626 AGO2Q9UKV8 859 aaKnown RBP8.67□□□□□ -1.02
HTT-208ENST00000510626 ZNF135P52742 658 aaPredicted RBP8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms