RNA–Protein interactions for RNA: ENST00000509860.1

PRDM16-205, Transcript of PR/SET domain 16, humanhuman

TSL 5

Gene PRDM16, Length 3,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-205ENST00000509860 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.15□□□□□ -0.3
PRDM16-205ENST00000509860 LAMA3Q16787 3333 aa13.15□□□□□ -0.3
PRDM16-205ENST00000509860 H0YHG0 523 aa13.15□□□□□ -0.3
PRDM16-205ENST00000509860 B4GALT3O60512 393 aa13.15□□□□□ -0.3
PRDM16-205ENST00000509860 ATP2C2O75185 946 aa13.15□□□□□ -0.3
PRDM16-205ENST00000509860 COILP38432 576 aaPredicted RBP13.15□□□□□ -0.3
PRDM16-205ENST00000509860 ACLYP53396 1101 aa13.15□□□□□ -0.3
PRDM16-205ENST00000509860 SARNPP82979 210 aaKnown RBP13.15□□□□□ -0.3
PRDM16-205ENST00000509860 MYO1EQ12965 1108 aa13.15□□□□□ -0.3
PRDM16-205ENST00000509860 FAM47CQ5HY64 1035 aa13.15□□□□□ -0.3
PRDM16-205ENST00000509860 PAQR9Q6ZVX9 377 aa13.15□□□□□ -0.3
PRDM16-205ENST00000509860 MRPL10Q7Z7H8 261 aaKnown RBP13.15□□□□□ -0.3
PRDM16-205ENST00000509860 PACS2Q86VP3 889 aa13.15□□□□□ -0.3
PRDM16-205ENST00000509860 CLEC4CQ8WTT0 213 aa13.15□□□□□ -0.3
PRDM16-205ENST00000509860 PADI3Q9ULW8 664 aa13.15□□□□□ -0.3
PRDM16-205ENST00000509860 ARL5CA6NH57 179 aa13.15□□□□□ -0.3
PRDM16-205ENST00000509860 PI4K2BG5E9Z4 385 aa13.15□□□□□ -0.3
PRDM16-205ENST00000509860 RPS6KA5O75582 802 aa13.15□□□□□ -0.3
PRDM16-205ENST00000509860 THPOP40225 353 aa13.15□□□□□ -0.3
PRDM16-205ENST00000509860 PSMC1P62191 440 aaKnown RBP13.15□□□□□ -0.3
PRDM16-205ENST00000509860 SEL1L2Q5TEA6 688 aa13.15□□□□□ -0.3
PRDM16-205ENST00000509860 EMBQ6PCB8 327 aa13.15□□□□□ -0.3
PRDM16-205ENST00000509860 RHOT1Q8IXI2 618 aa13.15□□□□□ -0.3
PRDM16-205ENST00000509860 MREGQ8N565 214 aa13.15□□□□□ -0.3
PRDM16-205ENST00000509860 LINC01599Q8WXQ3 324 aa13.15□□□□□ -0.3
PRDM16-205ENST00000509860 SLC4A5Q9BY07 1137 aa13.15□□□□□ -0.3
PRDM16-205ENST00000509860 TFE3P19532 575 aaPredicted RBP13.14□□□□□ -0.31
PRDM16-205ENST00000509860 GGCXP38435 758 aa13.14□□□□□ -0.31
PRDM16-205ENST00000509860 RPL21P46778 160 aaKnown RBP13.14□□□□□ -0.31
PRDM16-205ENST00000509860 CDR1P51861 262 aa13.14□□□□□ -0.31
PRDM16-205ENST00000509860 ITGA7Q13683 1181 aa13.14□□□□□ -0.31
PRDM16-205ENST00000509860 PPP1R2P3Q6NXS1 205 aa13.14□□□□□ -0.31
PRDM16-205ENST00000509860 CCDC137Q6PK04 289 aaKnown RBP13.14□□□□□ -0.31
PRDM16-205ENST00000509860 DPH6Q7L8W6 267 aa13.14□□□□□ -0.31
PRDM16-205ENST00000509860 SLC43A3Q8NBI5 491 aa13.14□□□□□ -0.31
PRDM16-205ENST00000509860 SH3GL2Q99962 352 aa13.14□□□□□ -0.31
PRDM16-205ENST00000509860 HEMGNQ9BXL5 484 aa13.14□□□□□ -0.31
PRDM16-205ENST00000509860 TMEM30AQ9NV96 361 aa13.14□□□□□ -0.31
PRDM16-205ENST00000509860 TANC1Q9C0D5 1861 aa13.14□□□□□ -0.31
PRDM16-205ENST00000509860 SCN5AQ14524 2016 aa13.14□□□□□ -0.31
PRDM16-205ENST00000509860 H0YGN5 161 aa13.14□□□□□ -0.31
PRDM16-205ENST00000509860 CD48P09326 243 aa13.14□□□□□ -0.31
PRDM16-205ENST00000509860 KRT10P13645 584 aa13.14□□□□□ -0.31
PRDM16-205ENST00000509860 P4HA1P13674 534 aa13.14□□□□□ -0.31
PRDM16-205ENST00000509860 IVDP26440 423 aa13.14□□□□□ -0.31
PRDM16-205ENST00000509860 NNTQ13423 1086 aa13.14□□□□□ -0.31
PRDM16-205ENST00000509860 TAZQ16635 292 aa13.14□□□□□ -0.31
PRDM16-205ENST00000509860 MFSD7Q6UXD7 560 aa13.14□□□□□ -0.31
PRDM16-205ENST00000509860 RTN4RL1Q86UN2 441 aaPredicted RBP13.14□□□□□ -0.31
PRDM16-205ENST00000509860 SLCO2A1Q92959 643 aa13.14□□□□□ -0.31
PRDM16-205ENST00000509860 GAD1Q99259 594 aa13.14□□□□□ -0.31
PRDM16-205ENST00000509860 B3GNT5Q9BYG0 378 aa13.14□□□□□ -0.31
PRDM16-205ENST00000509860 NFS1Q9Y697 457 aa13.14□□□□□ -0.31
PRDM16-205ENST00000509860 F8W810 466 aa13.14□□□□□ -0.31
PRDM16-205ENST00000509860 BEST1O76090 585 aa13.14□□□□□ -0.31
PRDM16-205ENST00000509860 GHRP10912 638 aa13.14□□□□□ -0.31
PRDM16-205ENST00000509860 RGS7P49802 495 aa13.14□□□□□ -0.31
PRDM16-205ENST00000509860 CLCNKBP51801 687 aa13.14□□□□□ -0.31
PRDM16-205ENST00000509860 GPNMBQ14956 572 aa13.14□□□□□ -0.31
PRDM16-205ENST00000509860 ARHGAP17Q68EM7 881 aa13.14□□□□□ -0.31
PRDM16-205ENST00000509860 PRUNE1Q86TP1 453 aa13.14□□□□□ -0.31
PRDM16-205ENST00000509860 CRYBG2Q8N1P7 616 aa13.14□□□□□ -0.31
PRDM16-205ENST00000509860 EIF1ADQ8N9N8 165 aaKnown RBP13.14□□□□□ -0.31
PRDM16-205ENST00000509860 EXD1Q8NHP7 514 aa13.14□□□□□ -0.31
PRDM16-205ENST00000509860 ERP44Q9BS26 406 aa13.14□□□□□ -0.31
PRDM16-205ENST00000509860 DCLK3Q9C098 648 aa13.14□□□□□ -0.31
PRDM16-205ENST00000509860 DPH5Q9H2P9 285 aa13.14□□□□□ -0.31
PRDM16-205ENST00000509860 CENPHQ9H3R5 247 aa13.14□□□□□ -0.31
PRDM16-205ENST00000509860 C2CD4BA6NLJ0 364 aa13.13□□□□□ -0.31
PRDM16-205ENST00000509860 GABRDO14764 452 aa13.13□□□□□ -0.31
PRDM16-205ENST00000509860 KIF1CO43896 1103 aaKnown RBP13.13□□□□□ -0.31
PRDM16-205ENST00000509860 PDGFRBP09619 1106 aa13.13□□□□□ -0.31
PRDM16-205ENST00000509860 KRT3P12035 628 aa13.13□□□□□ -0.31
PRDM16-205ENST00000509860 CHRNA3P32297 505 aa13.13□□□□□ -0.31
PRDM16-205ENST00000509860 HSPA9P38646 679 aaKnown RBP13.13□□□□□ -0.31
PRDM16-205ENST00000509860 APLP1P51693 650 aa13.13□□□□□ -0.31
PRDM16-205ENST00000509860 ZNF268Q14587 947 aaPredicted RBP13.13□□□□□ -0.31
PRDM16-205ENST00000509860 IQCKQ8N0W5 287 aa13.13□□□□□ -0.31
PRDM16-205ENST00000509860 FNIP1Q8TF40 1166 aa13.13□□□□□ -0.31
PRDM16-205ENST00000509860 C11orf84Q9BUA3 381 aaPredicted RBP13.13□□□□□ -0.31
PRDM16-205ENST00000509860 TRAIPQ9BWF2 469 aa13.13□□□□□ -0.31
PRDM16-205ENST00000509860 TRPV6Q9H1D0 765 aa13.13□□□□□ -0.31
PRDM16-205ENST00000509860 VWA8A3KMH1 1905 aa13.13□□□□□ -0.31
PRDM16-205ENST00000509860 PAPSS1O43252 624 aaPredicted RBP13.13□□□□□ -0.31
PRDM16-205ENST00000509860 CDKN2BP42772 138 aa13.13□□□□□ -0.31
PRDM16-205ENST00000509860 DHX34Q14147 1143 aaKnown RBP13.13□□□□□ -0.31
PRDM16-205ENST00000509860 TMEM110Q86TL2 294 aa13.13□□□□□ -0.31
PRDM16-205ENST00000509860 GLIS1Q8NBF1 620 aa13.13□□□□□ -0.31
PRDM16-205ENST00000509860 RNF25Q96BH1 459 aaPredicted RBP13.13□□□□□ -0.31
PRDM16-205ENST00000509860 RTP3Q9BQQ7 232 aa13.13□□□□□ -0.31
PRDM16-205ENST00000509860 MED4Q9NPJ6 270 aa13.13□□□□□ -0.31
PRDM16-205ENST00000509860 INHAP05111 366 aa13.13□□□□□ -0.31
PRDM16-205ENST00000509860 ARSEP51690 589 aa13.13□□□□□ -0.31
PRDM16-205ENST00000509860 NFX1Q12986 1120 aaKnown RBP13.13□□□□□ -0.31
PRDM16-205ENST00000509860 SMTNL2Q2TAL5 461 aa13.13□□□□□ -0.31
PRDM16-205ENST00000509860 MAP9Q49MG5 647 aa13.13□□□□□ -0.31
PRDM16-205ENST00000509860 KCNT1Q5JUK3 1230 aa13.13□□□□□ -0.31
PRDM16-205ENST00000509860 APBB1IPQ7Z5R6 666 aaPredicted RBP13.13□□□□□ -0.31
PRDM16-205ENST00000509860 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.13□□□□□ -0.31
PRDM16-205ENST00000509860 MAGOHBQ96A72 148 aaKnown RBP13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms