RNA–Protein interactions for RNA: ENST00000509774.5

PTPN20-222, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 788 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-222ENST00000509774 VAMP7P51809 220 aa11.03□□□□□ -0.64
PTPN20-222ENST00000509774 MARSP56192 900 aaKnown RBP11.03□□□□□ -0.64
PTPN20-222ENST00000509774 LILRA4P59901 499 aa11.03□□□□□ -0.64
PTPN20-222ENST00000509774 DSG1Q02413 1049 aa11.03□□□□□ -0.64
PTPN20-222ENST00000509774 BFSP1Q12934 665 aa11.03□□□□□ -0.64
PTPN20-222ENST00000509774 MYO1EQ12965 1108 aa11.03□□□□□ -0.64
PTPN20-222ENST00000509774 SIM2Q14190 667 aaPredicted RBP11.03□□□□□ -0.64
PTPN20-222ENST00000509774 SF3A2Q15428 464 aaKnown RBP11.03□□□□□ -0.64
PTPN20-222ENST00000509774 AASDHQ4L235 1098 aaPredicted RBP11.03□□□□□ -0.64
PTPN20-222ENST00000509774 STPG1Q5TH74 334 aa11.03□□□□□ -0.64
PTPN20-222ENST00000509774 KLHL10Q6JEL2 608 aa11.03□□□□□ -0.64
PTPN20-222ENST00000509774 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.03□□□□□ -0.64
PTPN20-222ENST00000509774 EFCAB13Q8IY85 973 aa11.03□□□□□ -0.64
PTPN20-222ENST00000509774 CSGALNACT2Q8N6G5 542 aa11.03□□□□□ -0.64
PTPN20-222ENST00000509774 APPL2Q8NEU8 664 aa11.03□□□□□ -0.64
PTPN20-222ENST00000509774 FGF14Q92915 247 aa11.03□□□□□ -0.64
PTPN20-222ENST00000509774 SUSD3Q96L08 255 aa11.03□□□□□ -0.64
PTPN20-222ENST00000509774 ZNF560Q96MR9 790 aa11.03□□□□□ -0.64
PTPN20-222ENST00000509774 KLHL5Q96PQ7 755 aa11.03□□□□□ -0.64
PTPN20-222ENST00000509774 DUSP9Q99956 384 aaKnown RBP11.03□□□□□ -0.64
PTPN20-222ENST00000509774 PAAF1Q9BRP4 392 aa11.03□□□□□ -0.64
PTPN20-222ENST00000509774 TTPALQ9BTX7 342 aa11.03□□□□□ -0.64
PTPN20-222ENST00000509774 HERC2P3Q9BVR0 1158 aa11.03□□□□□ -0.64
PTPN20-222ENST00000509774 MAN1C1Q9NR34 630 aa11.03□□□□□ -0.64
PTPN20-222ENST00000509774 MRPL17Q9NRX2 175 aaKnown RBP11.03□□□□□ -0.64
PTPN20-222ENST00000509774 TMEM63CQ9P1W3 806 aa11.03□□□□□ -0.64
PTPN20-222ENST00000509774 FNIP2Q9P278 1114 aa11.03□□□□□ -0.64
PTPN20-222ENST00000509774 ARMCX3Q9UH62 379 aaPredicted RBP11.03□□□□□ -0.64
PTPN20-222ENST00000509774 DSEQ9UL01 958 aa11.03□□□□□ -0.64
PTPN20-222ENST00000509774 FREM2Q5SZK8 3169 aa11.03□□□□□ -0.64
PTPN20-222ENST00000509774 ASXL3Q9C0F0 2248 aa11.03□□□□□ -0.64
PTPN20-222ENST00000509774 M0QZQ0 153 aa11.02□□□□□ -0.65
PTPN20-222ENST00000509774 GIPC1O14908 333 aa11.02□□□□□ -0.65
PTPN20-222ENST00000509774 PMM2O15305 246 aa11.02□□□□□ -0.65
PTPN20-222ENST00000509774 LILRB3O75022 631 aa11.02□□□□□ -0.65
PTPN20-222ENST00000509774 RFPL2O75678 378 aa11.02□□□□□ -0.65
PTPN20-222ENST00000509774 KIF4AO95239 1232 aa11.02□□□□□ -0.65
PTPN20-222ENST00000509774 STAU1O95793 577 aaKnown RBP11.02□□□□□ -0.65
PTPN20-222ENST00000509774 CAVIN2O95810 425 aa11.02□□□□□ -0.65
PTPN20-222ENST00000509774 FGFR3P22607 806 aa11.02□□□□□ -0.65
PTPN20-222ENST00000509774 KLRC2P26717 231 aa11.02□□□□□ -0.65
PTPN20-222ENST00000509774 TAF6P49848 677 aa11.02□□□□□ -0.65
PTPN20-222ENST00000509774 PMS1P54277 932 aaKnown RBP11.02□□□□□ -0.65
PTPN20-222ENST00000509774 NRLP54845 237 aa11.02□□□□□ -0.65
PTPN20-222ENST00000509774 SPAG1Q07617 926 aa11.02□□□□□ -0.65
PTPN20-222ENST00000509774 STX1AQ16623 288 aa11.02□□□□□ -0.65
PTPN20-222ENST00000509774 SV2CQ496J9 727 aa11.02□□□□□ -0.65
PTPN20-222ENST00000509774 CAVIN1Q6NZI2 390 aaKnown RBP11.02□□□□□ -0.65
PTPN20-222ENST00000509774 CD300LGQ6UXG3 332 aa11.02□□□□□ -0.65
PTPN20-222ENST00000509774 RSPO2Q6UXX9 243 aaPredicted RBP11.02□□□□□ -0.65
PTPN20-222ENST00000509774 ANKS3Q6ZW76 656 aa11.02□□□□□ -0.65
PTPN20-222ENST00000509774 DPH6Q7L8W6 267 aa11.02□□□□□ -0.65
PTPN20-222ENST00000509774 TRAPPC11Q7Z392 1133 aa11.02□□□□□ -0.65
PTPN20-222ENST00000509774 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.02□□□□□ -0.65
PTPN20-222ENST00000509774 C1orf127Q8N9H9 656 aa11.02□□□□□ -0.65
PTPN20-222ENST00000509774 CXorf38Q8TB03 319 aa11.02□□□□□ -0.65
PTPN20-222ENST00000509774 SPATA18Q8TC71 538 aa11.02□□□□□ -0.65
PTPN20-222ENST00000509774 ENOX1Q8TC92 643 aaKnown RBP11.02□□□□□ -0.65
PTPN20-222ENST00000509774 CCDC127Q96BQ5 260 aa11.02□□□□□ -0.65
PTPN20-222ENST00000509774 ZNF707Q96C28 371 aaPredicted RBP11.02□□□□□ -0.65
PTPN20-222ENST00000509774 FAXDC2Q96IV6 333 aa11.02□□□□□ -0.65
PTPN20-222ENST00000509774 BBC3Q96PG8 261 aaPredicted RBP11.02□□□□□ -0.65
PTPN20-222ENST00000509774 SRRTQ9BXP5 876 aaKnown RBP11.02□□□□□ -0.65
PTPN20-222ENST00000509774 EMILIN2Q9BXX0 1053 aa11.02□□□□□ -0.65
PTPN20-222ENST00000509774 GPR62Q9BZJ7 368 aa11.02□□□□□ -0.65
PTPN20-222ENST00000509774 NAT10Q9H0A0 1025 aaKnown RBP11.02□□□□□ -0.65
PTPN20-222ENST00000509774 VRTNQ9H8Y1 702 aa11.02□□□□□ -0.65
PTPN20-222ENST00000509774 GOLGA2P5Q9HBQ8 144 aa11.02□□□□□ -0.65
PTPN20-222ENST00000509774 RXFP1Q9HBX9 757 aa11.02□□□□□ -0.65
PTPN20-222ENST00000509774 GDAP2Q9NXN4 497 aa11.02□□□□□ -0.65
PTPN20-222ENST00000509774 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.02□□□□□ -0.65
PTPN20-222ENST00000509774 TUBGCP4Q9UGJ1 667 aa11.02□□□□□ -0.65
PTPN20-222ENST00000509774 CTNND2Q9UQB3 1225 aa11.02□□□□□ -0.65
PTPN20-222ENST00000509774 NOTCH4Q99466 2003 aa11.02□□□□□ -0.65
PTPN20-222ENST00000509774 TTC24A2A3L6 582 aaPredicted RBP11.01□□□□□ -0.65
PTPN20-222ENST00000509774 TRIM49BA6NDI0 452 aa11.01□□□□□ -0.65
PTPN20-222ENST00000509774 SHISA7A6NL88 538 aa11.01□□□□□ -0.65
PTPN20-222ENST00000509774 LRRIQ3A6PVS8 624 aaPredicted RBP11.01□□□□□ -0.65
PTPN20-222ENST00000509774 KPNA7A9QM74 516 aa11.01□□□□□ -0.65
PTPN20-222ENST00000509774 H7C4K7 107 aa11.01□□□□□ -0.65
PTPN20-222ENST00000509774 C4BPAP04003 597 aaKnown RBP11.01□□□□□ -0.65
PTPN20-222ENST00000509774 ITGB3P05106 788 aa11.01□□□□□ -0.65
PTPN20-222ENST00000509774 URODP06132 367 aa11.01□□□□□ -0.65
PTPN20-222ENST00000509774 CCDC192P0DO97 292 aa11.01□□□□□ -0.65
PTPN20-222ENST00000509774 CD46P15529 392 aa11.01□□□□□ -0.65
PTPN20-222ENST00000509774 TYMPP19971 482 aa11.01□□□□□ -0.65
PTPN20-222ENST00000509774 GLUD2P49448 558 aa11.01□□□□□ -0.65
PTPN20-222ENST00000509774 WNT7BP56706 349 aa11.01□□□□□ -0.65
PTPN20-222ENST00000509774 SRSF5Q13243 272 aaKnown RBP11.01□□□□□ -0.65
PTPN20-222ENST00000509774 TRPC3Q13507 836 aa11.01□□□□□ -0.65
PTPN20-222ENST00000509774 MRPL58Q14197 206 aaKnown RBP11.01□□□□□ -0.65
PTPN20-222ENST00000509774 TPD52L1Q16890 204 aaPredicted RBP11.01□□□□□ -0.65
PTPN20-222ENST00000509774 DPCR1Q3MIW9 517 aa11.01□□□□□ -0.65
PTPN20-222ENST00000509774 ZACNQ401N2 412 aa11.01□□□□□ -0.65
PTPN20-222ENST00000509774 FAM171A1Q5VUB5 890 aa11.01□□□□□ -0.65
PTPN20-222ENST00000509774 KRT39Q6A163 491 aa11.01□□□□□ -0.65
PTPN20-222ENST00000509774 PARM1Q6UWI2 310 aa11.01□□□□□ -0.65
PTPN20-222ENST00000509774 CYP26C1Q6V0L0 522 aa11.01□□□□□ -0.65
PTPN20-222ENST00000509774 GET4Q7L5D6 327 aaPredicted RBP11.01□□□□□ -0.65
PTPN20-222ENST00000509774 PDZD3Q86UT5 571 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms