RNA–Protein interactions for RNA: ENST00000509409.5

TPM3-219, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 1,248 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-219ENST00000509409 IFNAR2P48551 515 aa16.45■□□□□ 0.22
TPM3-219ENST00000509409 TNNC1P63316 161 aa16.45■□□□□ 0.22
TPM3-219ENST00000509409 CYP24A1Q07973 514 aa16.45■□□□□ 0.22
TPM3-219ENST00000509409 CCINQ13939 588 aa16.45■□□□□ 0.22
TPM3-219ENST00000509409 ZNF268Q14587 947 aaPredicted RBP16.45■□□□□ 0.22
TPM3-219ENST00000509409 PSMD6Q15008 389 aa16.45■□□□□ 0.22
TPM3-219ENST00000509409 PDGFRLQ15198 375 aa16.45■□□□□ 0.22
TPM3-219ENST00000509409 LAIR1Q6GTX8 287 aa16.45■□□□□ 0.22
TPM3-219ENST00000509409 CEP68Q76N32 757 aa16.45■□□□□ 0.22
TPM3-219ENST00000509409 CEP57L1Q8IYX8 460 aa16.45■□□□□ 0.22
TPM3-219ENST00000509409 ARL14EPQ8N8R7 260 aaPredicted RBP16.45■□□□□ 0.22
TPM3-219ENST00000509409 SCFD1Q8WVM8 642 aa16.45■□□□□ 0.22
TPM3-219ENST00000509409 KBTBD7Q8WVZ9 684 aa16.45■□□□□ 0.22
TPM3-219ENST00000509409 EXOC4Q96A65 974 aa16.45■□□□□ 0.22
TPM3-219ENST00000509409 MYRFLQ96LU7 910 aa16.45■□□□□ 0.22
TPM3-219ENST00000509409 CGRRF1Q99675 332 aa16.45■□□□□ 0.22
TPM3-219ENST00000509409 CRTAC1Q9NQ79 661 aa16.45■□□□□ 0.22
TPM3-219ENST00000509409 DUS2Q9NX74 493 aaKnown RBP16.45■□□□□ 0.22
TPM3-219ENST00000509409 CFAP45Q9UL16 551 aa16.45■□□□□ 0.22
TPM3-219ENST00000509409 FRYLO94915 3013 aa16.45■□□□□ 0.22
TPM3-219ENST00000509409 ZNF292O60281 2723 aa16.45■□□□□ 0.22
TPM3-219ENST00000509409 UBE4BO95155 1302 aa16.45■□□□□ 0.22
TPM3-219ENST00000509409 OTOGLQ3ZCN5 2332 aa16.44■□□□□ 0.22
TPM3-219ENST00000509409 PVALEFA0A1B0GWK0 134 aa16.44■□□□□ 0.22
TPM3-219ENST00000509409 PRR5-ARHGAP8B1AHC4 643 aa16.44■□□□□ 0.22
TPM3-219ENST00000509409 K7ESF4 209 aa16.44■□□□□ 0.22
TPM3-219ENST00000509409 EXOC3O60645 756 aa16.44■□□□□ 0.22
TPM3-219ENST00000509409 TADA3O75528 432 aa16.44■□□□□ 0.22
TPM3-219ENST00000509409 PAPSS2O95340 614 aaPredicted RBP16.44■□□□□ 0.22
TPM3-219ENST00000509409 HDCP19113 662 aa16.44■□□□□ 0.22
TPM3-219ENST00000509409 SDHBP21912 280 aa16.44■□□□□ 0.22
TPM3-219ENST00000509409 CNR2P34972 360 aa16.44■□□□□ 0.22
TPM3-219ENST00000509409 GALK1P51570 392 aa16.44■□□□□ 0.22
TPM3-219ENST00000509409 ARHGAP8P85298 464 aa16.44■□□□□ 0.22
TPM3-219ENST00000509409 FAM160A1Q05DH4 1040 aa16.44■□□□□ 0.22
TPM3-219ENST00000509409 SRSF5Q13243 272 aaKnown RBP16.44■□□□□ 0.22
TPM3-219ENST00000509409 CUL4BQ13620 913 aa16.44■□□□□ 0.22
TPM3-219ENST00000509409 KCNB1Q14721 858 aa16.44■□□□□ 0.22
TPM3-219ENST00000509409 MTF1Q14872 753 aa16.44■□□□□ 0.22
TPM3-219ENST00000509409 WDR72Q3MJ13 1102 aa16.44■□□□□ 0.22
TPM3-219ENST00000509409 MDH1BQ5I0G3 518 aa16.44■□□□□ 0.22
TPM3-219ENST00000509409 ATL3Q6DD88 541 aa16.44■□□□□ 0.22
TPM3-219ENST00000509409 VSTM1Q6UX27 236 aa16.44■□□□□ 0.22
TPM3-219ENST00000509409 LIMS2Q7Z4I7 341 aa16.44■□□□□ 0.22
TPM3-219ENST00000509409 SPATA17Q96L03 361 aa16.44■□□□□ 0.22
TPM3-219ENST00000509409 MRPL45Q9BRJ2 306 aaKnown RBP16.44■□□□□ 0.22
TPM3-219ENST00000509409 C2orf42Q9NWW7 574 aa16.44■□□□□ 0.22
TPM3-219ENST00000509409 TRPM5Q9NZQ8 1165 aa16.44■□□□□ 0.22
TPM3-219ENST00000509409 SLC8A2Q9UPR5 921 aa16.44■□□□□ 0.22
TPM3-219ENST00000509409 TCHHQ07283 1943 aa16.44■□□□□ 0.22
TPM3-219ENST00000509409 TSC2P49815 1807 aa16.44■□□□□ 0.22
TPM3-219ENST00000509409 PATJQ8NI35 1801 aa16.44■□□□□ 0.22
TPM3-219ENST00000509409 FANCMQ8IYD8 2048 aa16.43■□□□□ 0.22
TPM3-219ENST00000509409 OTOL1A6NHN0 477 aaPredicted RBP16.43■□□□□ 0.22
TPM3-219ENST00000509409 TRDMT1O14717 391 aaKnown RBP16.43■□□□□ 0.22
TPM3-219ENST00000509409 ATG13O75143 517 aa16.43■□□□□ 0.22
TPM3-219ENST00000509409 ABL1P00519 1130 aa16.43■□□□□ 0.22
TPM3-219ENST00000509409 RETP07949 1114 aa16.43■□□□□ 0.22
TPM3-219ENST00000509409 SPEM2Q0P670 501 aa16.43■□□□□ 0.22
TPM3-219ENST00000509409 NR1H3Q13133 447 aa16.43■□□□□ 0.22
TPM3-219ENST00000509409 KNOP1Q1ED39 458 aaKnown RBP16.43■□□□□ 0.22
TPM3-219ENST00000509409 TMEM196Q5HYL7 178 aa16.43■□□□□ 0.22
TPM3-219ENST00000509409 RESP18Q5W5W9 173 aa16.43■□□□□ 0.22
TPM3-219ENST00000509409 FSTL4Q6MZW2 842 aa16.43■□□□□ 0.22
TPM3-219ENST00000509409 DENND5BQ6ZUT9 1274 aa16.43■□□□□ 0.22
TPM3-219ENST00000509409 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.43■□□□□ 0.22
TPM3-219ENST00000509409 GRAMD1CQ8IYS0 662 aa16.43■□□□□ 0.22
TPM3-219ENST00000509409 CPA6Q8N4T0 437 aa16.43■□□□□ 0.22
TPM3-219ENST00000509409 RIN3Q8TB24 985 aa16.43■□□□□ 0.22
TPM3-219ENST00000509409 MYCBPAPQ8TBZ2 947 aa16.43■□□□□ 0.22
TPM3-219ENST00000509409 OSCP1Q8WVF1 389 aa16.43■□□□□ 0.22
TPM3-219ENST00000509409 SLC22A12Q96S37 553 aa16.43■□□□□ 0.22
TPM3-219ENST00000509409 ECT2Q9H8V3 914 aa16.43■□□□□ 0.22
TPM3-219ENST00000509409 DLL3Q9NYJ7 618 aa16.43■□□□□ 0.22
TPM3-219ENST00000509409 EHD2Q9NZN4 543 aa16.43■□□□□ 0.22
TPM3-219ENST00000509409 CGNQ9P2M7 1197 aaKnown RBP16.43■□□□□ 0.22
TPM3-219ENST00000509409 NXF1Q9UBU9 619 aaKnown RBP16.43■□□□□ 0.22
TPM3-219ENST00000509409 SERTAD1Q9UHV2 236 aa16.43■□□□□ 0.22
TPM3-219ENST00000509409 C2orf78A6NCI8 922 aa16.42■□□□□ 0.22
TPM3-219ENST00000509409 TRIM66O15016 1216 aa16.42■□□□□ 0.22
TPM3-219ENST00000509409 TACC1O75410 805 aa16.42■□□□□ 0.22
TPM3-219ENST00000509409 EGFP01133 1207 aa16.42■□□□□ 0.22
TPM3-219ENST00000509409 FAM163BP0C2L3 166 aa16.42■□□□□ 0.22
TPM3-219ENST00000509409 PTPN1P18031 435 aaKnown RBP16.42■□□□□ 0.22
TPM3-219ENST00000509409 PDE6CP51160 858 aa16.42■□□□□ 0.22
TPM3-219ENST00000509409 MYL6P60660 151 aa16.42■□□□□ 0.22
TPM3-219ENST00000509409 LMNB2Q03252 620 aa16.42■□□□□ 0.22
TPM3-219ENST00000509409 DNM1Q05193 864 aaKnown RBP16.42■□□□□ 0.22
TPM3-219ENST00000509409 WDR5BQ86VZ2 330 aa16.42■□□□□ 0.22
TPM3-219ENST00000509409 SH3RF2Q8TEC5 729 aa16.42■□□□□ 0.22
TPM3-219ENST00000509409 ZNF516Q92618 1163 aa16.42■□□□□ 0.22
TPM3-219ENST00000509409 ATP2A3Q93084 1043 aa16.42■□□□□ 0.22
TPM3-219ENST00000509409 PCED1BQ96HM7 432 aa16.42■□□□□ 0.22
TPM3-219ENST00000509409 P2RY13Q9BPV8 354 aa16.42■□□□□ 0.22
TPM3-219ENST00000509409 CDV3Q9UKY7 258 aaKnown RBP16.42■□□□□ 0.22
TPM3-219ENST00000509409 WNT6Q9Y6F9 365 aa16.42■□□□□ 0.22
TPM3-219ENST00000509409 COL4A2P08572 1712 aa16.42■□□□□ 0.22
TPM3-219ENST00000509409 A8MXQ7 604 aa16.41■□□□□ 0.22
TPM3-219ENST00000509409 DRD1P21728 446 aa16.41■□□□□ 0.22
TPM3-219ENST00000509409 HOXC13P31276 330 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms