RNA–Protein interactions for RNA: ENST00000509268.1

XRCC4-204, Transcript of X-ray repair cross complementing 4, humanhuman

TSL 2

Gene XRCC4, Length 1,567 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-204ENST00000509268 TTBK1Q5TCY1 1321 aaPredicted RBP2.86□□□□□ -1.95
XRCC4-204ENST00000509268 FESP07332 822 aa2.86□□□□□ -1.95
XRCC4-204ENST00000509268 CTSAP10619 480 aa2.86□□□□□ -1.95
XRCC4-204ENST00000509268 CYP2C19P33261 490 aa2.86□□□□□ -1.95
XRCC4-204ENST00000509268 ZNF280AP59817 542 aaPredicted RBP2.86□□□□□ -1.95
XRCC4-204ENST00000509268 OTUD3Q5T2D3 398 aaPredicted RBP2.86□□□□□ -1.95
XRCC4-204ENST00000509268 UBE2Q1Q7Z7E8 422 aa2.86□□□□□ -1.95
XRCC4-204ENST00000509268 CMIPQ8IY22 773 aa2.86□□□□□ -1.95
XRCC4-204ENST00000509268 DHX37Q8IY37 1157 aaKnown RBP2.86□□□□□ -1.95
XRCC4-204ENST00000509268 ABCF1Q8NE71 845 aaKnown RBP eCLIP2.86□□□□□ -1.95
XRCC4-204ENST00000509268 LEO1Q8WVC0 666 aaPredicted RBP2.86□□□□□ -1.95
XRCC4-204ENST00000509268 MAP4K1Q92918 833 aa2.86□□□□□ -1.95
XRCC4-204ENST00000509268 MRFAP1L1Q96HT8 127 aa2.86□□□□□ -1.95
XRCC4-204ENST00000509268 CIPCQ9C0C6 399 aa2.86□□□□□ -1.95
XRCC4-204ENST00000509268 GLOD4Q9HC38 313 aa2.86□□□□□ -1.95
XRCC4-204ENST00000509268 GPR35Q9HC97 309 aa2.86□□□□□ -1.95
XRCC4-204ENST00000509268 ZBTB40Q9NUA8 1239 aa2.86□□□□□ -1.95
XRCC4-204ENST00000509268 CFAP97Q9P2B7 532 aa2.86□□□□□ -1.95
XRCC4-204ENST00000509268 INTUQ9ULD6 942 aa2.86□□□□□ -1.95
XRCC4-204ENST00000509268 GABRQQ9UN88 632 aa2.86□□□□□ -1.95
XRCC4-204ENST00000509268 ANKRD62A6NC57 917 aa2.85□□□□□ -1.95
XRCC4-204ENST00000509268 PGGT1BP53609 377 aa2.85□□□□□ -1.95
XRCC4-204ENST00000509268 SCAND1P57086 179 aa2.85□□□□□ -1.95
XRCC4-204ENST00000509268 GADL1Q6ZQY3 521 aa2.85□□□□□ -1.95
XRCC4-204ENST00000509268 C16orf86Q6ZW13 317 aa2.85□□□□□ -1.95
XRCC4-204ENST00000509268 MIGA2Q7L4E1 593 aa2.85□□□□□ -1.95
XRCC4-204ENST00000509268 HOMER1Q86YM7 354 aa2.85□□□□□ -1.95
XRCC4-204ENST00000509268 SLC15A3Q8IY34 581 aa2.85□□□□□ -1.95
XRCC4-204ENST00000509268 NRG4Q8WWG1 115 aa2.85□□□□□ -1.95
XRCC4-204ENST00000509268 CCDC17Q96LX7 622 aa2.85□□□□□ -1.95
XRCC4-204ENST00000509268 TTC1Q99614 292 aa2.85□□□□□ -1.95
XRCC4-204ENST00000509268 SAP30BPQ9UHR5 308 aaKnown RBP2.85□□□□□ -1.95
XRCC4-204ENST00000509268 APOBEC2Q9Y235 224 aaKnown RBP2.85□□□□□ -1.95
XRCC4-204ENST00000509268 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa2.84□□□□□ -1.95
XRCC4-204ENST00000509268 IGLV5-39A0A0G2JS06 123 aa2.84□□□□□ -1.95
XRCC4-204ENST00000509268 A1L4Q6 167 aa2.84□□□□□ -1.95
XRCC4-204ENST00000509268 FOXN3O00409 490 aaPredicted RBP2.84□□□□□ -1.95
XRCC4-204ENST00000509268 CAMTA2O94983 1202 aa2.84□□□□□ -1.95
XRCC4-204ENST00000509268 PDE8BO95263 885 aa2.84□□□□□ -1.95
XRCC4-204ENST00000509268 PRKCBP05771 671 aa2.84□□□□□ -1.95
XRCC4-204ENST00000509268 MYCLP12524 364 aaPredicted RBP2.84□□□□□ -1.95
XRCC4-204ENST00000509268 TNFRSF8P28908 595 aa2.84□□□□□ -1.95
XRCC4-204ENST00000509268 GPR3P46089 330 aa2.84□□□□□ -1.95
XRCC4-204ENST00000509268 TOB1P50616 345 aaPredicted RBP2.84□□□□□ -1.95
XRCC4-204ENST00000509268 ALDH5A1P51649 535 aaPredicted RBP2.84□□□□□ -1.95
XRCC4-204ENST00000509268 CCDC93Q567U6 631 aa2.84□□□□□ -1.95
XRCC4-204ENST00000509268 TMEM63BQ5T3F8 832 aa2.84□□□□□ -1.95
XRCC4-204ENST00000509268 NR2C2APQ86WQ0 139 aa2.84□□□□□ -1.95
XRCC4-204ENST00000509268 LIX1LQ8IVB5 337 aa2.84□□□□□ -1.95
XRCC4-204ENST00000509268 ANKRD13AQ8IZ07 590 aa2.84□□□□□ -1.95
XRCC4-204ENST00000509268 MRGPRX4Q96LA9 322 aa2.84□□□□□ -1.95
XRCC4-204ENST00000509268 LENG8Q96PV6 779 aaPredicted RBP2.84□□□□□ -1.95
XRCC4-204ENST00000509268 MMS19Q96T76 1030 aa2.84□□□□□ -1.95
XRCC4-204ENST00000509268 TMEM8AQ9HCN3 771 aa2.84□□□□□ -1.95
XRCC4-204ENST00000509268 MAN1C1Q9NR34 630 aa2.84□□□□□ -1.95
XRCC4-204ENST00000509268 GNL3LQ9NVN8 582 aaKnown RBP2.84□□□□□ -1.95
XRCC4-204ENST00000509268 PLAAQ9Y263 795 aa2.84□□□□□ -1.95
XRCC4-204ENST00000509268 ZNF785A8K8V0 405 aa2.83□□□□□ -1.96
XRCC4-204ENST00000509268 GRID2O43424 1007 aa2.83□□□□□ -1.96
XRCC4-204ENST00000509268 GJB1P08034 283 aa2.83□□□□□ -1.96
XRCC4-204ENST00000509268 GNAI3P08754 354 aa2.83□□□□□ -1.96
XRCC4-204ENST00000509268 PLA2G2AP14555 144 aa2.83□□□□□ -1.96
XRCC4-204ENST00000509268 NCLP19338 710 aaKnown RBP2.83□□□□□ -1.96
XRCC4-204ENST00000509268 CHRM3P20309 590 aa2.83□□□□□ -1.96
XRCC4-204ENST00000509268 PPIFP30405 207 aaKnown RBP2.83□□□□□ -1.96
XRCC4-204ENST00000509268 PSMC1P62191 440 aaKnown RBP2.83□□□□□ -1.96
XRCC4-204ENST00000509268 GNAI1P63096 354 aa2.83□□□□□ -1.96
XRCC4-204ENST00000509268 RPL36AP83881 106 aaKnown RBP2.83□□□□□ -1.96
XRCC4-204ENST00000509268 CFHR1Q03591 330 aa2.83□□□□□ -1.96
XRCC4-204ENST00000509268 TLE1Q04724 770 aa2.83□□□□□ -1.96
XRCC4-204ENST00000509268 NFATC4Q14934 902 aa2.83□□□□□ -1.96
XRCC4-204ENST00000509268 L1TD1Q5T7N2 865 aaKnown RBP2.83□□□□□ -1.96
XRCC4-204ENST00000509268 TMEM108Q6UXF1 575 aa2.83□□□□□ -1.96
XRCC4-204ENST00000509268 PPP1R32Q7Z5V6 425 aa2.83□□□□□ -1.96
XRCC4-204ENST00000509268 PNISRQ8TF01 805 aaKnown RBP2.83□□□□□ -1.96
XRCC4-204ENST00000509268 MFSD3Q96ES6 412 aa2.83□□□□□ -1.96
XRCC4-204ENST00000509268 DNAJC2Q99543 621 aaKnown RBP2.83□□□□□ -1.96
XRCC4-204ENST00000509268 SEMA4BQ9NPR2 832 aaPredicted RBP2.83□□□□□ -1.96
XRCC4-204ENST00000509268 ZSCAN21Q9Y5A6 473 aaPredicted RBP2.83□□□□□ -1.96
XRCC4-204ENST00000509268 MMP24Q9Y5R2 645 aa2.83□□□□□ -1.96
XRCC4-204ENST00000509268 GPR45Q9Y5Y3 372 aa2.83□□□□□ -1.96
XRCC4-204ENST00000509268 VPS4BO75351 444 aa2.83□□□□□ -1.96
XRCC4-204ENST00000509268 GCATO75600 419 aa2.83□□□□□ -1.96
XRCC4-204ENST00000509268 PLGP00747 810 aaPredicted RBP2.83□□□□□ -1.96
XRCC4-204ENST00000509268 OSMP13725 252 aa2.83□□□□□ -1.96
XRCC4-204ENST00000509268 PHKG2P15735 406 aa2.83□□□□□ -1.96
XRCC4-204ENST00000509268 ZNF135P52742 658 aaPredicted RBP2.83□□□□□ -1.96
XRCC4-204ENST00000509268 MTX1Q13505 466 aa2.83□□□□□ -1.96
XRCC4-204ENST00000509268 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP2.83□□□□□ -1.96
XRCC4-204ENST00000509268 IQCF1Q8N6M8 205 aa2.83□□□□□ -1.96
XRCC4-204ENST00000509268 XAGE5Q8WWM1 108 aa2.83□□□□□ -1.96
XRCC4-204ENST00000509268 GLG1Q92896 1179 aa2.83□□□□□ -1.96
XRCC4-204ENST00000509268 HDAC10Q969S8 669 aa2.83□□□□□ -1.96
XRCC4-204ENST00000509268 NLRP4Q96MN2 994 aa2.83□□□□□ -1.96
XRCC4-204ENST00000509268 SLITRK1Q96PX8 696 aa2.83□□□□□ -1.96
XRCC4-204ENST00000509268 NTPCRQ9BSD7 190 aaKnown RBP2.83□□□□□ -1.96
XRCC4-204ENST00000509268 POLR3GLQ9BT43 218 aa2.83□□□□□ -1.96
XRCC4-204ENST00000509268 ARHGAP39Q9C0H5 1083 aa2.83□□□□□ -1.96
XRCC4-204ENST00000509268 NIPSNAP3AQ9UFN0 247 aaPredicted RBP2.83□□□□□ -1.96
XRCC4-204ENST00000509268 MAPRE3Q9UPY8 281 aa2.83□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms