RNA–Protein interactions for RNA: ENST00000509006.1

DEPDC1B-204, Transcript of DEP domain containing 1B, humanhuman

TSL 4

Gene DEPDC1B, Length 651 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-204ENST00000509006 SLC29A4Q7RTT9 530 aa2.94□□□□□ -1.94
DEPDC1B-204ENST00000509006 TTC7BQ86TV6 843 aa2.94□□□□□ -1.94
DEPDC1B-204ENST00000509006 SENP7Q9BQF6 1050 aa2.94□□□□□ -1.94
DEPDC1B-204ENST00000509006 C1orf43Q9BWL3 253 aa2.94□□□□□ -1.94
DEPDC1B-204ENST00000509006 TINAGL1Q9GZM7 467 aaPredicted RBP2.94□□□□□ -1.94
DEPDC1B-204ENST00000509006 MAF1Q9H063 256 aa2.94□□□□□ -1.94
DEPDC1B-204ENST00000509006 ARNT2Q9HBZ2 717 aa2.94□□□□□ -1.94
DEPDC1B-204ENST00000509006 GNL3LQ9NVN8 582 aaKnown RBP2.94□□□□□ -1.94
DEPDC1B-204ENST00000509006 WWOXQ9NZC7 414 aa2.94□□□□□ -1.94
DEPDC1B-204ENST00000509006 SH3BP4Q9P0V3 963 aa2.94□□□□□ -1.94
DEPDC1B-204ENST00000509006 SWAP70Q9UH65 585 aa2.94□□□□□ -1.94
DEPDC1B-204ENST00000509006 THRAP3Q9Y2W1 955 aaKnown RBP2.94□□□□□ -1.94
DEPDC1B-204ENST00000509006 NOTCH4Q99466 2003 aa2.93□□□□□ -1.94
DEPDC1B-204ENST00000509006 LRRC14BA6NHZ5 514 aa2.93□□□□□ -1.94
DEPDC1B-204ENST00000509006 KCNU1A8MYU2 1149 aa2.93□□□□□ -1.94
DEPDC1B-204ENST00000509006 VPS4BO75351 444 aa2.93□□□□□ -1.94
DEPDC1B-204ENST00000509006 RPLP2P05387 115 aaKnown RBP2.93□□□□□ -1.94
DEPDC1B-204ENST00000509006 GNAI3P08754 354 aa2.93□□□□□ -1.94
DEPDC1B-204ENST00000509006 IL6RP08887 468 aaPredicted RBP2.93□□□□□ -1.94
DEPDC1B-204ENST00000509006 IFIT2P09913 472 aaKnown RBP2.93□□□□□ -1.94
DEPDC1B-204ENST00000509006 FTH1P19P0C7X4 201 aa2.93□□□□□ -1.94
DEPDC1B-204ENST00000509006 MAN1A1P33908 653 aa2.93□□□□□ -1.94
DEPDC1B-204ENST00000509006 LIPAP38571 399 aa2.93□□□□□ -1.94
DEPDC1B-204ENST00000509006 ARHGAP25P42331 645 aa2.93□□□□□ -1.94
DEPDC1B-204ENST00000509006 GCLCP48506 637 aaPredicted RBP2.93□□□□□ -1.94
DEPDC1B-204ENST00000509006 CDKN1CP49918 316 aaPredicted RBP2.93□□□□□ -1.94
DEPDC1B-204ENST00000509006 NEK2P51955 445 aa2.93□□□□□ -1.94
DEPDC1B-204ENST00000509006 ADKP55263 362 aaKnown RBP2.93□□□□□ -1.94
DEPDC1B-204ENST00000509006 GNAI1P63096 354 aa2.93□□□□□ -1.94
DEPDC1B-204ENST00000509006 LAMB3Q13751 1172 aa2.93□□□□□ -1.94
DEPDC1B-204ENST00000509006 FAM50AQ14320 339 aaKnown RBP2.93□□□□□ -1.94
DEPDC1B-204ENST00000509006 LRRC41Q15345 812 aa2.93□□□□□ -1.94
DEPDC1B-204ENST00000509006 PCBP2Q15366 365 aaKnown RBP eCLIP2.93□□□□□ -1.94
DEPDC1B-204ENST00000509006 ABCB5Q2M3G0 1257 aa2.93□□□□□ -1.94
DEPDC1B-204ENST00000509006 SYDE2Q5VT97 1194 aa2.93□□□□□ -1.94
DEPDC1B-204ENST00000509006 NXNQ6DKJ4 435 aa2.93□□□□□ -1.94
DEPDC1B-204ENST00000509006 KIAA1161Q6NSJ0 714 aa2.93□□□□□ -1.94
DEPDC1B-204ENST00000509006 DLK2Q6UY11 383 aa2.93□□□□□ -1.94
DEPDC1B-204ENST00000509006 CATSPERGQ6ZRH7 1159 aa2.93□□□□□ -1.94
DEPDC1B-204ENST00000509006 MEPCEQ7L2J0 689 aaKnown RBP2.93□□□□□ -1.94
DEPDC1B-204ENST00000509006 WDR53Q7Z5U6 358 aaPredicted RBP2.93□□□□□ -1.94
DEPDC1B-204ENST00000509006 C11orf96Q7Z7L8 435 aa2.93□□□□□ -1.94
DEPDC1B-204ENST00000509006 ZBTB46Q86UZ6 589 aa2.93□□□□□ -1.94
DEPDC1B-204ENST00000509006 CHMP4CQ96CF2 233 aa2.93□□□□□ -1.94
DEPDC1B-204ENST00000509006 ZC3H10Q96K80 434 aaKnown RBP2.93□□□□□ -1.94
DEPDC1B-204ENST00000509006 PRSS22Q9GZN4 317 aa2.93□□□□□ -1.94
DEPDC1B-204ENST00000509006 AASDHPPTQ9NRN7 309 aa2.93□□□□□ -1.94
DEPDC1B-204ENST00000509006 DUSP22Q9NRW4 184 aa2.93□□□□□ -1.94
DEPDC1B-204ENST00000509006 TUBA8Q9NY65 449 aaPredicted RBP2.93□□□□□ -1.94
DEPDC1B-204ENST00000509006 SH2B3Q9UQQ2 575 aa2.93□□□□□ -1.94
DEPDC1B-204ENST00000509006 RAD54BQ9Y620 910 aa2.93□□□□□ -1.94
DEPDC1B-204ENST00000509006 WASHC2CQ9Y4E1 1318 aa2.93□□□□□ -1.94
DEPDC1B-204ENST00000509006 CYP2D7A0A087X1C5 515 aa2.92□□□□□ -1.94
DEPDC1B-204ENST00000509006 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa2.92□□□□□ -1.94
DEPDC1B-204ENST00000509006 SMIM35A0A1B0GVV1 85 aa2.92□□□□□ -1.94
DEPDC1B-204ENST00000509006 CCDC189A1A4V9 331 aa2.92□□□□□ -1.94
DEPDC1B-204ENST00000509006 SMIM22K7EJ46 135 aa2.92□□□□□ -1.94
DEPDC1B-204ENST00000509006 GABRDO14764 452 aa2.92□□□□□ -1.94
DEPDC1B-204ENST00000509006 SLC16A3O15427 465 aaKnown RBP2.92□□□□□ -1.94
DEPDC1B-204ENST00000509006 XPOTO43592 962 aaKnown RBP2.92□□□□□ -1.94
DEPDC1B-204ENST00000509006 ZRANB2O95218 330 aaKnown RBP eCLIP2.92□□□□□ -1.94
DEPDC1B-204ENST00000509006 SCGB1D2O95969 90 aa2.92□□□□□ -1.94
DEPDC1B-204ENST00000509006 MYBL2P10244 700 aa2.92□□□□□ -1.94
DEPDC1B-204ENST00000509006 CD53P19397 219 aa2.92□□□□□ -1.94
DEPDC1B-204ENST00000509006 CYP2C18P33260 490 aa2.92□□□□□ -1.94
DEPDC1B-204ENST00000509006 PHKA1P46020 1223 aa2.92□□□□□ -1.94
DEPDC1B-204ENST00000509006 ALDH9A1P49189 494 aa2.92□□□□□ -1.94
DEPDC1B-204ENST00000509006 CLCN2P51788 898 aa2.92□□□□□ -1.94
DEPDC1B-204ENST00000509006 EEFSECP57772 596 aaKnown RBP2.92□□□□□ -1.94
DEPDC1B-204ENST00000509006 CYP4F2P78329 520 aa2.92□□□□□ -1.94
DEPDC1B-204ENST00000509006 SP2Q02086 613 aa2.92□□□□□ -1.94
DEPDC1B-204ENST00000509006 PICALMQ13492 652 aa2.92□□□□□ -1.94
DEPDC1B-204ENST00000509006 PIN1Q13526 163 aaPredicted RBP2.92□□□□□ -1.94
DEPDC1B-204ENST00000509006 MTMR1Q13613 665 aa2.92□□□□□ -1.94
DEPDC1B-204ENST00000509006 MORC3Q14149 939 aa2.92□□□□□ -1.94
DEPDC1B-204ENST00000509006 ODF1Q14990 250 aa2.92□□□□□ -1.94
DEPDC1B-204ENST00000509006 DAZAP2Q15038 168 aaPredicted RBP2.92□□□□□ -1.94
DEPDC1B-204ENST00000509006 CXorf57Q6NSI4 855 aaKnown RBP2.92□□□□□ -1.94
DEPDC1B-204ENST00000509006 TMEM108Q6UXF1 575 aa2.92□□□□□ -1.94
DEPDC1B-204ENST00000509006 KSR2Q6VAB6 950 aa2.92□□□□□ -1.94
DEPDC1B-204ENST00000509006 ZNF804AQ7Z570 1209 aa2.92□□□□□ -1.94
DEPDC1B-204ENST00000509006 USP37Q86T82 979 aa2.92□□□□□ -1.94
DEPDC1B-204ENST00000509006 CHSY1Q86X52 802 aa2.92□□□□□ -1.94
DEPDC1B-204ENST00000509006 KRT73Q86Y46 540 aa2.92□□□□□ -1.94
DEPDC1B-204ENST00000509006 TCEAL8Q8IYN2 117 aa2.92□□□□□ -1.94
DEPDC1B-204ENST00000509006 GALNT16Q8N428 558 aa2.92□□□□□ -1.94
DEPDC1B-204ENST00000509006 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP2.92□□□□□ -1.94
DEPDC1B-204ENST00000509006 C8orf58Q8NAV2 365 aa2.92□□□□□ -1.94
DEPDC1B-204ENST00000509006 FANCBQ8NB91 859 aa2.92□□□□□ -1.94
DEPDC1B-204ENST00000509006 TSR2Q969E8 191 aaKnown RBP2.92□□□□□ -1.94
DEPDC1B-204ENST00000509006 NELL2Q99435 816 aa2.92□□□□□ -1.94
DEPDC1B-204ENST00000509006 MACROD1Q9BQ69 325 aa2.92□□□□□ -1.94
DEPDC1B-204ENST00000509006 FSD1LQ9BXM9 530 aa2.92□□□□□ -1.94
DEPDC1B-204ENST00000509006 SIK2Q9H0K1 926 aa2.92□□□□□ -1.94
DEPDC1B-204ENST00000509006 PRDM11Q9NQV5 511 aa2.92□□□□□ -1.94
DEPDC1B-204ENST00000509006 TRHDEQ9UKU6 1024 aa2.92□□□□□ -1.94
DEPDC1B-204ENST00000509006 ZDHHC8Q9ULC8 765 aa2.92□□□□□ -1.94
DEPDC1B-204ENST00000509006 SSX2IPQ9Y2D8 614 aa2.92□□□□□ -1.94
DEPDC1B-204ENST00000509006 LAS1LQ9Y4W2 734 aaKnown RBP2.92□□□□□ -1.94
DEPDC1B-204ENST00000509006 AFG3L2Q9Y4W6 797 aa2.92□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms