RNA–Protein interactions for RNA: ENST00000508848.5

POLR2J3-213, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 5

Gene POLR2J3, Length 1,030 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-213ENST00000508848 CISHQ9NSE2 258 aa11.27□□□□□ -0.61
POLR2J3-213ENST00000508848 RTN3O95197 1032 aaPredicted RBP11.26□□□□□ -0.61
POLR2J3-213ENST00000508848 PAEPP09466 180 aa11.26□□□□□ -0.61
POLR2J3-213ENST00000508848 BDNFP23560 247 aa11.26□□□□□ -0.61
POLR2J3-213ENST00000508848 GBP2P32456 591 aaPredicted RBP11.26□□□□□ -0.61
POLR2J3-213ENST00000508848 CCR2P41597 374 aa11.26□□□□□ -0.61
POLR2J3-213ENST00000508848 MTMR3Q13615 1198 aa11.26□□□□□ -0.61
POLR2J3-213ENST00000508848 TAF12Q16514 161 aa11.26□□□□□ -0.61
POLR2J3-213ENST00000508848 STX1AQ16623 288 aa11.26□□□□□ -0.61
POLR2J3-213ENST00000508848 MEA1Q16626 185 aa11.26□□□□□ -0.61
POLR2J3-213ENST00000508848 TPD52L1Q16890 204 aaPredicted RBP11.26□□□□□ -0.61
POLR2J3-213ENST00000508848 SLC5A9Q2M3M2 681 aa11.26□□□□□ -0.61
POLR2J3-213ENST00000508848 CDKAL1Q5VV42 579 aa11.26□□□□□ -0.61
POLR2J3-213ENST00000508848 SNX30Q5VWJ9 437 aa11.26□□□□□ -0.61
POLR2J3-213ENST00000508848 ARHGAP17Q68EM7 881 aa11.26□□□□□ -0.61
POLR2J3-213ENST00000508848 SPOPLQ6IQ16 392 aa11.26□□□□□ -0.61
POLR2J3-213ENST00000508848 UBR7Q8N806 425 aa11.26□□□□□ -0.61
POLR2J3-213ENST00000508848 SMARCD2Q92925 531 aa11.26□□□□□ -0.61
POLR2J3-213ENST00000508848 TATDN2Q93075 761 aa11.26□□□□□ -0.61
POLR2J3-213ENST00000508848 MYLPFQ96A32 169 aa11.26□□□□□ -0.61
POLR2J3-213ENST00000508848 TMEM176AQ96HP8 235 aa11.26□□□□□ -0.61
POLR2J3-213ENST00000508848 ASB16Q96NS5 453 aa11.26□□□□□ -0.61
POLR2J3-213ENST00000508848 SEPT5Q99719 369 aaPredicted RBP11.26□□□□□ -0.61
POLR2J3-213ENST00000508848 NAT10Q9H0A0 1025 aaKnown RBP11.26□□□□□ -0.61
POLR2J3-213ENST00000508848 TASP1Q9H6P5 420 aa11.26□□□□□ -0.61
POLR2J3-213ENST00000508848 TMEM63CQ9P1W3 806 aa11.26□□□□□ -0.61
POLR2J3-213ENST00000508848 WNT16Q9UBV4 365 aa11.26□□□□□ -0.61
POLR2J3-213ENST00000508848 DAAM1Q9Y4D1 1078 aa11.26□□□□□ -0.61
POLR2J3-213ENST00000508848 PATJQ8NI35 1801 aa11.25□□□□□ -0.61
POLR2J3-213ENST00000508848 SLC38A8A6NNN8 435 aa11.25□□□□□ -0.61
POLR2J3-213ENST00000508848 TNFRSF10BO14763 440 aa11.25□□□□□ -0.61
POLR2J3-213ENST00000508848 SRFP11831 508 aa11.25□□□□□ -0.61
POLR2J3-213ENST00000508848 TCF3P15923 654 aa11.25□□□□□ -0.61
POLR2J3-213ENST00000508848 ANXA13P27216 316 aa11.25□□□□□ -0.61
POLR2J3-213ENST00000508848 GRIK1P39086 918 aa11.25□□□□□ -0.61
POLR2J3-213ENST00000508848 PDE6CP51160 858 aa11.25□□□□□ -0.61
POLR2J3-213ENST00000508848 RAD23BP54727 409 aa11.25□□□□□ -0.61
POLR2J3-213ENST00000508848 NTHL1P78549 312 aa11.25□□□□□ -0.61
POLR2J3-213ENST00000508848 CYP27A1Q02318 531 aa11.25□□□□□ -0.61
POLR2J3-213ENST00000508848 SIGLEC14Q08ET2 396 aa11.25□□□□□ -0.61
POLR2J3-213ENST00000508848 ZNF268Q14587 947 aaPredicted RBP11.25□□□□□ -0.61
POLR2J3-213ENST00000508848 STILQ15468 1287 aa11.25□□□□□ -0.61
POLR2J3-213ENST00000508848 ARHGAP15Q53QZ3 475 aa11.25□□□□□ -0.61
POLR2J3-213ENST00000508848 TCP11X2Q5H9J9 407 aa11.25□□□□□ -0.61
POLR2J3-213ENST00000508848 MDH1BQ5I0G3 518 aa11.25□□□□□ -0.61
POLR2J3-213ENST00000508848 GBP6Q6ZN66 633 aa11.25□□□□□ -0.61
POLR2J3-213ENST00000508848 DENND5BQ6ZUT9 1274 aa11.25□□□□□ -0.61
POLR2J3-213ENST00000508848 TMEM150AQ86TG1 271 aa11.25□□□□□ -0.61
POLR2J3-213ENST00000508848 ACOT1Q86TX2 421 aa11.25□□□□□ -0.61
POLR2J3-213ENST00000508848 MON1AQ86VX9 555 aa11.25□□□□□ -0.61
POLR2J3-213ENST00000508848 HS6ST3Q8IZP7 471 aa11.25□□□□□ -0.61
POLR2J3-213ENST00000508848 NUP93Q8N1F7 819 aa11.25□□□□□ -0.61
POLR2J3-213ENST00000508848 PDZD8Q8NEN9 1154 aa11.25□□□□□ -0.61
POLR2J3-213ENST00000508848 SHKBP1Q8TBC3 707 aa11.25□□□□□ -0.61
POLR2J3-213ENST00000508848 CYFIP2Q96F07 1278 aa11.25□□□□□ -0.61
POLR2J3-213ENST00000508848 TUBGCP2Q9BSJ2 902 aa11.25□□□□□ -0.61
POLR2J3-213ENST00000508848 NDST4Q9H3R1 872 aa11.25□□□□□ -0.61
POLR2J3-213ENST00000508848 DPEP3Q9H4B8 488 aa11.25□□□□□ -0.61
POLR2J3-213ENST00000508848 ZFP14Q9HCL3 533 aa11.25□□□□□ -0.61
POLR2J3-213ENST00000508848 DMAP1Q9NPF5 467 aaPredicted RBP11.25□□□□□ -0.61
POLR2J3-213ENST00000508848 DUSP12Q9UNI6 340 aa11.25□□□□□ -0.61
POLR2J3-213ENST00000508848 F5P12259 2224 aa11.25□□□□□ -0.61
POLR2J3-213ENST00000508848 ZDBF2Q9HCK1 2354 aa11.25□□□□□ -0.61
POLR2J3-213ENST00000508848 F8VP50 259 aa11.24□□□□□ -0.61
POLR2J3-213ENST00000508848 LRRN2O75325 713 aa11.24□□□□□ -0.61
POLR2J3-213ENST00000508848 VDRP11473 427 aa11.24□□□□□ -0.61
POLR2J3-213ENST00000508848 MYL4P12829 197 aa11.24□□□□□ -0.61
POLR2J3-213ENST00000508848 GLULP15104 373 aa11.24□□□□□ -0.61
POLR2J3-213ENST00000508848 ACO1P21399 889 aaKnown RBP11.24□□□□□ -0.61
POLR2J3-213ENST00000508848 RFX1P22670 979 aa11.24□□□□□ -0.61
POLR2J3-213ENST00000508848 GABRR2P28476 465 aa11.24□□□□□ -0.61
POLR2J3-213ENST00000508848 PSMC1P62191 440 aaKnown RBP11.24□□□□□ -0.61
POLR2J3-213ENST00000508848 PFKPQ01813 784 aa11.24□□□□□ -0.61
POLR2J3-213ENST00000508848 DDR2Q16832 855 aa11.24□□□□□ -0.61
POLR2J3-213ENST00000508848 EXOC3L4Q17RC7 722 aa11.24□□□□□ -0.61
POLR2J3-213ENST00000508848 VWA3BQ502W6 1294 aa11.24□□□□□ -0.61
POLR2J3-213ENST00000508848 TRIM67Q6ZTA4 783 aa11.24□□□□□ -0.61
POLR2J3-213ENST00000508848 GET4Q7L5D6 327 aaPredicted RBP11.24□□□□□ -0.61
POLR2J3-213ENST00000508848 FAM35AQ86V20 835 aa11.24□□□□□ -0.61
POLR2J3-213ENST00000508848 MFSD6LQ8IWD5 586 aa11.24□□□□□ -0.61
POLR2J3-213ENST00000508848 ANKRD52Q8NB46 1076 aa11.24□□□□□ -0.61
POLR2J3-213ENST00000508848 SLC4A11Q8NBS3 891 aa11.24□□□□□ -0.61
POLR2J3-213ENST00000508848 FAM200AQ8TCP9 573 aa11.24□□□□□ -0.61
POLR2J3-213ENST00000508848 DEPDC1BQ8WUY9 529 aa11.24□□□□□ -0.61
POLR2J3-213ENST00000508848 KHSRPQ92945 711 aaKnown RBP eCLIP11.24□□□□□ -0.61
POLR2J3-213ENST00000508848 TCEAL4Q96EI5 215 aa11.24□□□□□ -0.61
POLR2J3-213ENST00000508848 DUSP16Q9BY84 665 aa11.24□□□□□ -0.61
POLR2J3-213ENST00000508848 ATXN3LQ9H3M9 355 aa11.24□□□□□ -0.61
POLR2J3-213ENST00000508848 FBXO44Q9H4M3 255 aa11.24□□□□□ -0.61
POLR2J3-213ENST00000508848 MMRN2Q9H8L6 949 aa11.24□□□□□ -0.61
POLR2J3-213ENST00000508848 MUTYHQ9UIF7 546 aa11.24□□□□□ -0.61
POLR2J3-213ENST00000508848 NFE2L3Q9Y4A8 694 aa11.24□□□□□ -0.61
POLR2J3-213ENST00000508848 A0A1W2PRU2 124 aa11.23□□□□□ -0.61
POLR2J3-213ENST00000508848 SMTNL1A8MU46 457 aa11.23□□□□□ -0.61
POLR2J3-213ENST00000508848 PRR33A8MZF0 331 aa11.23□□□□□ -0.61
POLR2J3-213ENST00000508848 HCRTO43612 131 aa11.23□□□□□ -0.61
POLR2J3-213ENST00000508848 ZDHHC11BP0C7U3 371 aa11.23□□□□□ -0.61
POLR2J3-213ENST00000508848 FAM200BP0CF97 657 aa11.23□□□□□ -0.61
POLR2J3-213ENST00000508848 ZNF18P17022 549 aa11.23□□□□□ -0.61
POLR2J3-213ENST00000508848 CEBPBP17676 345 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms