RNA–Protein interactions for RNA: ENST00000508818.5

UBE2D3-227, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2

Gene UBE2D3, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-227ENST00000508818 BDNFP23560 247 aa10.78□□□□□ -0.68
UBE2D3-227ENST00000508818 LMO2P25791 158 aa10.78□□□□□ -0.68
UBE2D3-227ENST00000508818 PDE6CP51160 858 aa10.78□□□□□ -0.68
UBE2D3-227ENST00000508818 AP3M2P53677 418 aa10.78□□□□□ -0.68
UBE2D3-227ENST00000508818 KRT85P78386 507 aa10.78□□□□□ -0.68
UBE2D3-227ENST00000508818 TNK2Q07912 1038 aa10.78□□□□□ -0.68
UBE2D3-227ENST00000508818 GRSF1Q12849 480 aaKnown RBP eCLIP10.78□□□□□ -0.68
UBE2D3-227ENST00000508818 RUNX3Q13761 415 aa10.78□□□□□ -0.68
UBE2D3-227ENST00000508818 PKP1Q13835 747 aa10.78□□□□□ -0.68
UBE2D3-227ENST00000508818 KCNB1Q14721 858 aa10.78□□□□□ -0.68
UBE2D3-227ENST00000508818 BMT2Q1RMZ1 405 aa10.78□□□□□ -0.68
UBE2D3-227ENST00000508818 FAM171BQ6P995 826 aa10.78□□□□□ -0.68
UBE2D3-227ENST00000508818 VSTM1Q6UX27 236 aa10.78□□□□□ -0.68
UBE2D3-227ENST00000508818 TMEM150AQ86TG1 271 aa10.78□□□□□ -0.68
UBE2D3-227ENST00000508818 GRAMD1CQ8IYS0 662 aa10.78□□□□□ -0.68
UBE2D3-227ENST00000508818 ZNF687Q8N1G0 1237 aa10.78□□□□□ -0.68
UBE2D3-227ENST00000508818 SYNPOQ8N3V7 929 aa10.78□□□□□ -0.68
UBE2D3-227ENST00000508818 DCLK2Q8N568 766 aa10.78□□□□□ -0.68
UBE2D3-227ENST00000508818 SUMF1Q8NBK3 374 aa10.78□□□□□ -0.68
UBE2D3-227ENST00000508818 ZBTB44Q8NCP5 570 aa10.78□□□□□ -0.68
UBE2D3-227ENST00000508818 STKLD1Q8NE28 680 aa10.78□□□□□ -0.68
UBE2D3-227ENST00000508818 KBTBD7Q8WVZ9 684 aa10.78□□□□□ -0.68
UBE2D3-227ENST00000508818 USP13Q92995 863 aaPredicted RBP10.78□□□□□ -0.68
UBE2D3-227ENST00000508818 MYLPFQ96A32 169 aa10.78□□□□□ -0.68
UBE2D3-227ENST00000508818 SYAP1Q96A49 352 aaPredicted RBP10.78□□□□□ -0.68
UBE2D3-227ENST00000508818 TRMT2BQ96GJ1 504 aaKnown RBP10.78□□□□□ -0.68
UBE2D3-227ENST00000508818 SPATA32Q96LK8 384 aa10.78□□□□□ -0.68
UBE2D3-227ENST00000508818 MYRFLQ96LU7 910 aa10.78□□□□□ -0.68
UBE2D3-227ENST00000508818 EBF3Q9H4W6 596 aa10.78□□□□□ -0.68
UBE2D3-227ENST00000508818 RBM12Q9NTZ6 932 aaKnown RBP10.78□□□□□ -0.68
UBE2D3-227ENST00000508818 TRPM5Q9NZQ8 1165 aa10.78□□□□□ -0.68
UBE2D3-227ENST00000508818 NXF1Q9UBU9 619 aaKnown RBP10.78□□□□□ -0.68
UBE2D3-227ENST00000508818 ATP6V1DQ9Y5K8 247 aa10.78□□□□□ -0.68
UBE2D3-227ENST00000508818 TSC2P49815 1807 aa10.78□□□□□ -0.68
UBE2D3-227ENST00000508818 TICRRQ7Z2Z1 1910 aa10.78□□□□□ -0.68
UBE2D3-227ENST00000508818 A0A1B0GVL5 298 aa10.77□□□□□ -0.69
UBE2D3-227ENST00000508818 A8MXQ7 604 aa10.77□□□□□ -0.69
UBE2D3-227ENST00000508818 TRIM66O15016 1216 aa10.77□□□□□ -0.69
UBE2D3-227ENST00000508818 KIF20AO95235 890 aa10.77□□□□□ -0.69
UBE2D3-227ENST00000508818 ABL1P00519 1130 aa10.77□□□□□ -0.69
UBE2D3-227ENST00000508818 PTPN1P18031 435 aaKnown RBP10.77□□□□□ -0.69
UBE2D3-227ENST00000508818 HDCP19113 662 aa10.77□□□□□ -0.69
UBE2D3-227ENST00000508818 CMA1P23946 247 aa10.77□□□□□ -0.69
UBE2D3-227ENST00000508818 ATICP31939 592 aa10.77□□□□□ -0.69
UBE2D3-227ENST00000508818 IFNAR2P48551 515 aa10.77□□□□□ -0.69
UBE2D3-227ENST00000508818 FOXK2Q01167 660 aa10.77□□□□□ -0.69
UBE2D3-227ENST00000508818 SATB1Q01826 763 aa10.77□□□□□ -0.69
UBE2D3-227ENST00000508818 EHHADHQ08426 723 aa10.77□□□□□ -0.69
UBE2D3-227ENST00000508818 NR1H3Q13133 447 aa10.77□□□□□ -0.69
UBE2D3-227ENST00000508818 ZNF268Q14587 947 aaPredicted RBP10.77□□□□□ -0.69
UBE2D3-227ENST00000508818 PDGFRLQ15198 375 aa10.77□□□□□ -0.69
UBE2D3-227ENST00000508818 MDH1BQ5I0G3 518 aa10.77□□□□□ -0.69
UBE2D3-227ENST00000508818 TXNDC11Q6PKC3 985 aa10.77□□□□□ -0.69
UBE2D3-227ENST00000508818 PRR23BQ6ZRT6 265 aa10.77□□□□□ -0.69
UBE2D3-227ENST00000508818 DENND5BQ6ZUT9 1274 aa10.77□□□□□ -0.69
UBE2D3-227ENST00000508818 C12orf56Q8IXR9 622 aa10.77□□□□□ -0.69
UBE2D3-227ENST00000508818 GPR161Q8N6U8 529 aaKnown RBP10.77□□□□□ -0.69
UBE2D3-227ENST00000508818 MYCBPAPQ8TBZ2 947 aa10.77□□□□□ -0.69
UBE2D3-227ENST00000508818 SPATA17Q96L03 361 aa10.77□□□□□ -0.69
UBE2D3-227ENST00000508818 CEP295NLQ96MC4 621 aa10.77□□□□□ -0.69
UBE2D3-227ENST00000508818 CYP2S1Q96SQ9 504 aa10.77□□□□□ -0.69
UBE2D3-227ENST00000508818 PKMYT1Q99640 499 aa10.77□□□□□ -0.69
UBE2D3-227ENST00000508818 FAM83CQ9BQN1 747 aa10.77□□□□□ -0.69
UBE2D3-227ENST00000508818 MRPL45Q9BRJ2 306 aaKnown RBP10.77□□□□□ -0.69
UBE2D3-227ENST00000508818 CRTAC1Q9NQ79 661 aa10.77□□□□□ -0.69
UBE2D3-227ENST00000508818 DUS2Q9NX74 493 aaKnown RBP10.77□□□□□ -0.69
UBE2D3-227ENST00000508818 GMEB2Q9UKD1 530 aa10.77□□□□□ -0.69
UBE2D3-227ENST00000508818 SMG5Q9UPR3 1016 aaKnown RBP10.77□□□□□ -0.69
UBE2D3-227ENST00000508818 CCL26Q9Y258 94 aa10.77□□□□□ -0.69
UBE2D3-227ENST00000508818 LILRB5O75023 590 aa10.76□□□□□ -0.69
UBE2D3-227ENST00000508818 ATG13O75143 517 aa10.76□□□□□ -0.69
UBE2D3-227ENST00000508818 TACC1O75410 805 aa10.76□□□□□ -0.69
UBE2D3-227ENST00000508818 MYL1P05976 194 aa10.76□□□□□ -0.69
UBE2D3-227ENST00000508818 P4HA1P13674 534 aa10.76□□□□□ -0.69
UBE2D3-227ENST00000508818 PFKFB1P16118 471 aa10.76□□□□□ -0.69
UBE2D3-227ENST00000508818 SYKP43405 635 aa10.76□□□□□ -0.69
UBE2D3-227ENST00000508818 PPP3CCP48454 512 aa10.76□□□□□ -0.69
UBE2D3-227ENST00000508818 MYL6P60660 151 aa10.76□□□□□ -0.69
UBE2D3-227ENST00000508818 FAM160A1Q05DH4 1040 aa10.76□□□□□ -0.69
UBE2D3-227ENST00000508818 STK4Q13043 487 aa10.76□□□□□ -0.69
UBE2D3-227ENST00000508818 MTF1Q14872 753 aa10.76□□□□□ -0.69
UBE2D3-227ENST00000508818 CCDC142Q17RM4 750 aa10.76□□□□□ -0.69
UBE2D3-227ENST00000508818 KMT5BQ4FZB7 885 aa10.76□□□□□ -0.69
UBE2D3-227ENST00000508818 ZNF667Q5HYK9 610 aa10.76□□□□□ -0.69
UBE2D3-227ENST00000508818 TDRD10Q5VZ19 366 aaKnown RBP10.76□□□□□ -0.69
UBE2D3-227ENST00000508818 HEATR6Q6AI08 1181 aaKnown RBP10.76□□□□□ -0.69
UBE2D3-227ENST00000508818 TRIM68Q6AZZ1 485 aa10.76□□□□□ -0.69
UBE2D3-227ENST00000508818 LIMS2Q7Z4I7 341 aa10.76□□□□□ -0.69
UBE2D3-227ENST00000508818 CPA6Q8N4T0 437 aa10.76□□□□□ -0.69
UBE2D3-227ENST00000508818 ARL14EPQ8N8R7 260 aaPredicted RBP10.76□□□□□ -0.69
UBE2D3-227ENST00000508818 NELL1Q92832 810 aa10.76□□□□□ -0.69
UBE2D3-227ENST00000508818 CCDC34Q96HJ3 373 aa10.76□□□□□ -0.69
UBE2D3-227ENST00000508818 PCED1BQ96HM7 432 aa10.76□□□□□ -0.69
UBE2D3-227ENST00000508818 MED10Q9BTT4 135 aa10.76□□□□□ -0.69
UBE2D3-227ENST00000508818 EPC1Q9H2F5 836 aa10.76□□□□□ -0.69
UBE2D3-227ENST00000508818 FRMD4BQ9Y2L6 1034 aa10.76□□□□□ -0.69
UBE2D3-227ENST00000508818 ATP8B3O60423 1300 aa10.76□□□□□ -0.69
UBE2D3-227ENST00000508818 NUP210Q8TEM1 1887 aaPredicted RBP10.75□□□□□ -0.69
UBE2D3-227ENST00000508818 CHURC1-FNTBB4DL54 471 aa10.75□□□□□ -0.69
UBE2D3-227ENST00000508818 PDXKO00764 312 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms