RNA–Protein interactions for RNA: ENST00000508668.1

HMGN1P11-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 11, humanhuman

BASIC

Gene HMGN1P11, Length 303 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P11-201ENST00000508668 ANTXR2P58335 489 aa4.18□□□□□ -1.74
HMGN1P11-201ENST00000508668 CCT2P78371 535 aaKnown RBP4.18□□□□□ -1.74
HMGN1P11-201ENST00000508668 ITIH3Q06033 890 aa4.18□□□□□ -1.74
HMGN1P11-201ENST00000508668 HYAL1Q12794 435 aa4.18□□□□□ -1.74
HMGN1P11-201ENST00000508668 SMAD2Q15796 467 aaKnown RBP4.18□□□□□ -1.74
HMGN1P11-201ENST00000508668 XKR3Q5GH77 459 aa4.18□□□□□ -1.74
HMGN1P11-201ENST00000508668 FOXB2Q5VYV0 432 aa4.18□□□□□ -1.74
HMGN1P11-201ENST00000508668 MPZL3Q6UWV2 235 aa4.18□□□□□ -1.74
HMGN1P11-201ENST00000508668 CABP7Q86V35 215 aa4.18□□□□□ -1.74
HMGN1P11-201ENST00000508668 RHPN2Q8IUC4 686 aa4.18□□□□□ -1.74
HMGN1P11-201ENST00000508668 CCDC103Q8IW40 242 aa4.18□□□□□ -1.74
HMGN1P11-201ENST00000508668 TDRD5Q8NAT2 981 aaKnown RBP4.18□□□□□ -1.74
HMGN1P11-201ENST00000508668 KREMEN2Q8NCW0 462 aa4.18□□□□□ -1.74
HMGN1P11-201ENST00000508668 CNNM3Q8NE01 707 aa4.18□□□□□ -1.74
HMGN1P11-201ENST00000508668 RDM1Q8NG50 284 aa4.18□□□□□ -1.74
HMGN1P11-201ENST00000508668 KCNG4Q8TDN1 519 aa4.18□□□□□ -1.74
HMGN1P11-201ENST00000508668 TRAPPC12Q8WVT3 735 aa4.18□□□□□ -1.74
HMGN1P11-201ENST00000508668 TCP11Q8WWU5 503 aa4.18□□□□□ -1.74
HMGN1P11-201ENST00000508668 MRPS27Q92552 414 aaKnown RBP4.18□□□□□ -1.74
HMGN1P11-201ENST00000508668 NLRP4Q96MN2 994 aa4.18□□□□□ -1.74
HMGN1P11-201ENST00000508668 TCEANC2Q96MN5 208 aa4.18□□□□□ -1.74
HMGN1P11-201ENST00000508668 RIT2Q99578 217 aa4.18□□□□□ -1.74
HMGN1P11-201ENST00000508668 PHF7Q9BWX1 381 aaPredicted RBP4.18□□□□□ -1.74
HMGN1P11-201ENST00000508668 RNF26Q9BY78 433 aaPredicted RBP4.18□□□□□ -1.74
HMGN1P11-201ENST00000508668 LSG1Q9H089 658 aaKnown RBP4.18□□□□□ -1.74
HMGN1P11-201ENST00000508668 ELAC1Q9H777 363 aaKnown RBP4.18□□□□□ -1.74
HMGN1P11-201ENST00000508668 UBN1Q9NPG3 1134 aa4.18□□□□□ -1.74
HMGN1P11-201ENST00000508668 SH3GLB2Q9NR46 395 aa4.18□□□□□ -1.74
HMGN1P11-201ENST00000508668 CHST12Q9NRB3 414 aa4.18□□□□□ -1.74
HMGN1P11-201ENST00000508668 RGS18Q9NS28 235 aa4.18□□□□□ -1.74
HMGN1P11-201ENST00000508668 TYW1Q9NV66 732 aaKnown RBP4.18□□□□□ -1.74
HMGN1P11-201ENST00000508668 MUTYHQ9UIF7 546 aa4.18□□□□□ -1.74
HMGN1P11-201ENST00000508668 TMEFF2Q9UIK5 374 aaPredicted RBP4.18□□□□□ -1.74
HMGN1P11-201ENST00000508668 PIN4Q9Y237 131 aaKnown RBP4.18□□□□□ -1.74
HMGN1P11-201ENST00000508668 LZTS1Q9Y250 596 aa4.18□□□□□ -1.74
HMGN1P11-201ENST00000508668 NOC2LQ9Y3T9 749 aaKnown RBP4.18□□□□□ -1.74
HMGN1P11-201ENST00000508668 BDP1A6H8Y1 2624 aa4.18□□□□□ -1.74
HMGN1P11-201ENST00000508668 TRIP12Q14669 1992 aaPredicted RBP4.18□□□□□ -1.74
HMGN1P11-201ENST00000508668 KDM3AQ9Y4C1 1321 aa4.18□□□□□ -1.74
HMGN1P11-201ENST00000508668 LAMA3Q16787 3333 aa4.17□□□□□ -1.74
HMGN1P11-201ENST00000508668 PRRC2BQ5JSZ5 2229 aaKnown RBP4.17□□□□□ -1.74
HMGN1P11-201ENST00000508668 TCF20Q9UGU0 1960 aaKnown RBP4.17□□□□□ -1.74
HMGN1P11-201ENST00000508668 TRBV23-1A0A0A0MS06 115 aa4.17□□□□□ -1.74
HMGN1P11-201ENST00000508668 A0A1W2PQJ5 194 aa4.17□□□□□ -1.74
HMGN1P11-201ENST00000508668 ESYT2A0FGR8 921 aa4.17□□□□□ -1.74
HMGN1P11-201ENST00000508668 C7orf72A4D263 438 aa4.17□□□□□ -1.74
HMGN1P11-201ENST00000508668 TMEM221A6NGB7 291 aa4.17□□□□□ -1.74
HMGN1P11-201ENST00000508668 M0R296 226 aa4.17□□□□□ -1.74
HMGN1P11-201ENST00000508668 CCNT1O60563 726 aaKnown RBP4.17□□□□□ -1.74
HMGN1P11-201ENST00000508668 CAPNS1P04632 268 aa4.17□□□□□ -1.74
HMGN1P11-201ENST00000508668 ALDH2P05091 517 aa4.17□□□□□ -1.74
HMGN1P11-201ENST00000508668 ITGB1P05556 798 aa4.17□□□□□ -1.74
HMGN1P11-201ENST00000508668 URODP06132 367 aa4.17□□□□□ -1.74
HMGN1P11-201ENST00000508668 GLI1P08151 1106 aa4.17□□□□□ -1.74
HMGN1P11-201ENST00000508668 CYP3A4P08684 503 aa4.17□□□□□ -1.74
HMGN1P11-201ENST00000508668 MSL3P1P0C860 447 aa4.17□□□□□ -1.74
HMGN1P11-201ENST00000508668 ATF7P17544 494 aaPredicted RBP4.17□□□□□ -1.74
HMGN1P11-201ENST00000508668 SP100P23497 879 aaPredicted RBP4.17□□□□□ -1.74
HMGN1P11-201ENST00000508668 TACR1P25103 407 aa4.17□□□□□ -1.74
HMGN1P11-201ENST00000508668 HOXC8P31273 242 aa4.17□□□□□ -1.74
HMGN1P11-201ENST00000508668 CLCN3P51790 818 aa4.17□□□□□ -1.74
HMGN1P11-201ENST00000508668 PSMC5P62195 406 aa4.17□□□□□ -1.74
HMGN1P11-201ENST00000508668 PRKCEQ02156 737 aa4.17□□□□□ -1.74
HMGN1P11-201ENST00000508668 CREMQ03060 361 aa4.17□□□□□ -1.74
HMGN1P11-201ENST00000508668 SIGLEC14Q08ET2 396 aa4.17□□□□□ -1.74
HMGN1P11-201ENST00000508668 MGAT3Q09327 533 aa4.17□□□□□ -1.74
HMGN1P11-201ENST00000508668 MAP4K2Q12851 820 aa4.17□□□□□ -1.74
HMGN1P11-201ENST00000508668 COASYQ13057 564 aa4.17□□□□□ -1.74
HMGN1P11-201ENST00000508668 STK3Q13188 491 aa4.17□□□□□ -1.74
HMGN1P11-201ENST00000508668 ADAM15Q13444 863 aa4.17□□□□□ -1.74
HMGN1P11-201ENST00000508668 CBX2Q14781 532 aaPredicted RBP4.17□□□□□ -1.74
HMGN1P11-201ENST00000508668 GPNMBQ14956 572 aa4.17□□□□□ -1.74
HMGN1P11-201ENST00000508668 NECTIN1Q15223 517 aa4.17□□□□□ -1.74
HMGN1P11-201ENST00000508668 INF2Q27J81 1249 aa4.17□□□□□ -1.74
HMGN1P11-201ENST00000508668 LETM2Q2VYF4 491 aa4.17□□□□□ -1.74
HMGN1P11-201ENST00000508668 C2orf27AQ580R0 203 aa4.17□□□□□ -1.74
HMGN1P11-201ENST00000508668 FAM209AQ5JX71 171 aa4.17□□□□□ -1.74
HMGN1P11-201ENST00000508668 SLC35F1Q5T1Q4 408 aa4.17□□□□□ -1.74
HMGN1P11-201ENST00000508668 MBLAC2Q68D91 279 aa4.17□□□□□ -1.74
HMGN1P11-201ENST00000508668 DENND5AQ6IQ26 1287 aa4.17□□□□□ -1.74
HMGN1P11-201ENST00000508668 KCNT2Q6UVM3 1135 aa4.17□□□□□ -1.74
HMGN1P11-201ENST00000508668 ABHD15Q6UXT9 468 aa4.17□□□□□ -1.74
HMGN1P11-201ENST00000508668 OTOP3Q7RTS5 596 aa4.17□□□□□ -1.74
HMGN1P11-201ENST00000508668 ZNF410Q86VK4 478 aa4.17□□□□□ -1.74
HMGN1P11-201ENST00000508668 UBALD2Q8IYN6 164 aa4.17□□□□□ -1.74
HMGN1P11-201ENST00000508668 KIAA0319LQ8IZA0 1049 aa4.17□□□□□ -1.74
HMGN1P11-201ENST00000508668 FAM177A1Q8N128 213 aaPredicted RBP4.17□□□□□ -1.74
HMGN1P11-201ENST00000508668 COLGALT1Q8NBJ5 622 aa4.17□□□□□ -1.74
HMGN1P11-201ENST00000508668 ERMNQ8TAM6 284 aa4.17□□□□□ -1.74
HMGN1P11-201ENST00000508668 SPPL3Q8TCT6 385 aa4.17□□□□□ -1.74
HMGN1P11-201ENST00000508668 THAP3Q8WTV1 239 aaPredicted RBP4.17□□□□□ -1.74
HMGN1P11-201ENST00000508668 PSPC1Q8WXF1 523 aaKnown RBP4.17□□□□□ -1.74
HMGN1P11-201ENST00000508668 DIO2Q92813 273 aa4.17□□□□□ -1.74
HMGN1P11-201ENST00000508668 EDAQ92838 391 aa4.17□□□□□ -1.74
HMGN1P11-201ENST00000508668 PHKBQ93100 1093 aa4.17□□□□□ -1.74
HMGN1P11-201ENST00000508668 LIN37Q96GY3 246 aaPredicted RBP4.17□□□□□ -1.74
HMGN1P11-201ENST00000508668 C1orf159Q96HA4 380 aa4.17□□□□□ -1.74
HMGN1P11-201ENST00000508668 EXOC2Q96KP1 924 aa4.17□□□□□ -1.74
HMGN1P11-201ENST00000508668 CEP170P1Q96L14 293 aa4.17□□□□□ -1.74
HMGN1P11-201ENST00000508668 CTAGE1Q96RT6 745 aa4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms