RNA–Protein interactions for RNA: ENST00000508559.1

BRCC3P1-201, Transcript of BRCA1/BRCA2-containing complex subunit 3 pseudogene 1, humanhuman

BASIC

Gene BRCC3P1, Length 951 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P1-201ENST00000508559 TRIM66O15016 1216 aa11.66□□□□□ -0.54
BRCC3P1-201ENST00000508559 TEX28O15482 410 aa11.66□□□□□ -0.54
BRCC3P1-201ENST00000508559 ADAM12O43184 909 aa11.66□□□□□ -0.54
BRCC3P1-201ENST00000508559 TBC1D4O60343 1298 aa11.66□□□□□ -0.54
BRCC3P1-201ENST00000508559 RTN2O75298 545 aa11.66□□□□□ -0.54
BRCC3P1-201ENST00000508559 NDUFA10O95299 355 aa11.66□□□□□ -0.54
BRCC3P1-201ENST00000508559 GLUD1P00367 558 aa11.66□□□□□ -0.54
BRCC3P1-201ENST00000508559 CNPP09543 421 aaKnown RBP11.66□□□□□ -0.54
BRCC3P1-201ENST00000508559 NPR3P17342 541 aa11.66□□□□□ -0.54
BRCC3P1-201ENST00000508559 CYP2F1P24903 491 aa11.66□□□□□ -0.54
BRCC3P1-201ENST00000508559 DNAJB1P25685 340 aa11.66□□□□□ -0.54
BRCC3P1-201ENST00000508559 ALDH1A3P47895 512 aa11.66□□□□□ -0.54
BRCC3P1-201ENST00000508559 TUFMP49411 452 aaKnown RBP11.66□□□□□ -0.54
BRCC3P1-201ENST00000508559 RPL10AP62906 217 aaKnown RBP11.66□□□□□ -0.54
BRCC3P1-201ENST00000508559 KRT83P78385 493 aa11.66□□□□□ -0.54
BRCC3P1-201ENST00000508559 GFPT1Q06210 699 aaPredicted RBP11.66□□□□□ -0.54
BRCC3P1-201ENST00000508559 DUSP4Q13115 394 aa11.66□□□□□ -0.54
BRCC3P1-201ENST00000508559 RAB33AQ14088 237 aa11.66□□□□□ -0.54
BRCC3P1-201ENST00000508559 SLC18A3Q16572 532 aa11.66□□□□□ -0.54
BRCC3P1-201ENST00000508559 LIN9Q5TKA1 542 aa11.66□□□□□ -0.54
BRCC3P1-201ENST00000508559 ALKBH5Q6P6C2 394 aaKnown RBP11.66□□□□□ -0.54
BRCC3P1-201ENST00000508559 VSTM1Q6UX27 236 aa11.66□□□□□ -0.54
BRCC3P1-201ENST00000508559 RSPO2Q6UXX9 243 aaPredicted RBP11.66□□□□□ -0.54
BRCC3P1-201ENST00000508559 RNF19BQ6ZMZ0 732 aa11.66□□□□□ -0.54
BRCC3P1-201ENST00000508559 KIAA1328Q86T90 577 aa11.66□□□□□ -0.54
BRCC3P1-201ENST00000508559 ERICH1Q86X53 443 aa11.66□□□□□ -0.54
BRCC3P1-201ENST00000508559 ATAD1Q8NBU5 361 aa11.66□□□□□ -0.54
BRCC3P1-201ENST00000508559 C1orf131Q8NDD1 294 aaKnown RBP11.66□□□□□ -0.54
BRCC3P1-201ENST00000508559 ZNF461Q8TAF7 563 aa11.66□□□□□ -0.54
BRCC3P1-201ENST00000508559 DDX1Q92499 740 aaKnown RBP11.66□□□□□ -0.54
BRCC3P1-201ENST00000508559 SECISBP2LQ93073 1101 aaKnown RBP11.66□□□□□ -0.54
BRCC3P1-201ENST00000508559 KLHL5Q96PQ7 755 aa11.66□□□□□ -0.54
BRCC3P1-201ENST00000508559 RHOBTB2Q9BYZ6 727 aa11.66□□□□□ -0.54
BRCC3P1-201ENST00000508559 LHX5Q9H2C1 402 aa11.66□□□□□ -0.54
BRCC3P1-201ENST00000508559 TLE6Q9H808 572 aa11.66□□□□□ -0.54
BRCC3P1-201ENST00000508559 LRRC4Q9HBW1 653 aa11.66□□□□□ -0.54
BRCC3P1-201ENST00000508559 ABCB6Q9NP58 842 aa11.66□□□□□ -0.54
BRCC3P1-201ENST00000508559 SLC27A5Q9Y2P5 690 aa11.66□□□□□ -0.54
BRCC3P1-201ENST00000508559 GBF1Q92538 1859 aa11.66□□□□□ -0.54
BRCC3P1-201ENST00000508559 A0A087X0T9 212 aa11.65□□□□□ -0.54
BRCC3P1-201ENST00000508559 WDR27A2RRH5 827 aa11.65□□□□□ -0.54
BRCC3P1-201ENST00000508559 HIDE1A8MVS5 230 aa11.65□□□□□ -0.54
BRCC3P1-201ENST00000508559 RFXAPO00287 272 aa11.65□□□□□ -0.54
BRCC3P1-201ENST00000508559 DDX3XO00571 662 aaKnown RBP eCLIP11.65□□□□□ -0.54
BRCC3P1-201ENST00000508559 FSCN2O14926 492 aa11.65□□□□□ -0.54
BRCC3P1-201ENST00000508559 CFHP08603 1231 aa11.65□□□□□ -0.54
BRCC3P1-201ENST00000508559 FAM228BP0C875 321 aa11.65□□□□□ -0.54
BRCC3P1-201ENST00000508559 FECHP22830 423 aa11.65□□□□□ -0.54
BRCC3P1-201ENST00000508559 MAGEA1P43355 309 aa11.65□□□□□ -0.54
BRCC3P1-201ENST00000508559 MAGEA11P43364 429 aa11.65□□□□□ -0.54
BRCC3P1-201ENST00000508559 ACADSBP45954 432 aa11.65□□□□□ -0.54
BRCC3P1-201ENST00000508559 RGS7P49802 495 aa11.65□□□□□ -0.54
BRCC3P1-201ENST00000508559 PDE4CQ08493 712 aa11.65□□□□□ -0.54
BRCC3P1-201ENST00000508559 MTF1Q14872 753 aa11.65□□□□□ -0.54
BRCC3P1-201ENST00000508559 CFAP221Q4G0U5 840 aa11.65□□□□□ -0.54
BRCC3P1-201ENST00000508559 C10orf76Q5T2E6 689 aa11.65□□□□□ -0.54
BRCC3P1-201ENST00000508559 ZNF697Q5TEC3 545 aa11.65□□□□□ -0.54
BRCC3P1-201ENST00000508559 ACAD10Q6JQN1 1059 aa11.65□□□□□ -0.54
BRCC3P1-201ENST00000508559 CCDC149Q6ZUS6 474 aa11.65□□□□□ -0.54
BRCC3P1-201ENST00000508559 RBM23Q86U06 439 aaKnown RBP11.65□□□□□ -0.54
BRCC3P1-201ENST00000508559 TTC30AQ86WT1 665 aa11.65□□□□□ -0.54
BRCC3P1-201ENST00000508559 SIX6OS1Q8N1H7 587 aa11.65□□□□□ -0.54
BRCC3P1-201ENST00000508559 SLC30A5Q8TAD4 765 aa11.65□□□□□ -0.54
BRCC3P1-201ENST00000508559 MRPL38Q96DV4 380 aaKnown RBP11.65□□□□□ -0.54
BRCC3P1-201ENST00000508559 TRIM11Q96F44 468 aa11.65□□□□□ -0.54
BRCC3P1-201ENST00000508559 PPP1R13BQ96KQ4 1090 aa11.65□□□□□ -0.54
BRCC3P1-201ENST00000508559 PCDHB18PQ96TA0 734 aa11.65□□□□□ -0.54
BRCC3P1-201ENST00000508559 PKMYT1Q99640 499 aa11.65□□□□□ -0.54
BRCC3P1-201ENST00000508559 ZSWIM1Q9BR11 485 aa11.65□□□□□ -0.54
BRCC3P1-201ENST00000508559 ADAM22Q9P0K1 906 aa11.65□□□□□ -0.54
BRCC3P1-201ENST00000508559 DPP7Q9UHL4 492 aa11.65□□□□□ -0.54
BRCC3P1-201ENST00000508559 NAGPAQ9UK23 515 aa11.65□□□□□ -0.54
BRCC3P1-201ENST00000508559 MAFFQ9ULX9 164 aa11.65□□□□□ -0.54
BRCC3P1-201ENST00000508559 PCDHGC5Q9Y5F6 944 aa11.65□□□□□ -0.54
BRCC3P1-201ENST00000508559 IRAK3Q9Y616 596 aa11.65□□□□□ -0.54
BRCC3P1-201ENST00000508559 TSC2P49815 1807 aa11.65□□□□□ -0.55
BRCC3P1-201ENST00000508559 TMEM265A0A087WTH1 108 aa11.64□□□□□ -0.55
BRCC3P1-201ENST00000508559 EIF3CLB5ME19 914 aaKnown RBP11.64□□□□□ -0.55
BRCC3P1-201ENST00000508559 F8VP50 259 aa11.64□□□□□ -0.55
BRCC3P1-201ENST00000508559 XPO1O14980 1071 aaKnown RBP11.64□□□□□ -0.55
BRCC3P1-201ENST00000508559 LILRB3O75022 631 aa11.64□□□□□ -0.55
BRCC3P1-201ENST00000508559 FTLP02792 175 aaPredicted RBP11.64□□□□□ -0.55
BRCC3P1-201ENST00000508559 CALB1P05937 261 aa11.64□□□□□ -0.55
BRCC3P1-201ENST00000508559 H2AFZP0C0S5 128 aa11.64□□□□□ -0.55
BRCC3P1-201ENST00000508559 SPATA31D3P0C874 917 aa11.64□□□□□ -0.55
BRCC3P1-201ENST00000508559 GZMAP12544 262 aa11.64□□□□□ -0.55
BRCC3P1-201ENST00000508559 LCP1P13796 627 aa11.64□□□□□ -0.55
BRCC3P1-201ENST00000508559 ATF2P15336 505 aa11.64□□□□□ -0.55
BRCC3P1-201ENST00000508559 ABCB4P21439 1286 aa11.64□□□□□ -0.55
BRCC3P1-201ENST00000508559 IRS1P35568 1242 aa11.64□□□□□ -0.55
BRCC3P1-201ENST00000508559 NOMO3P69849 1222 aa11.64□□□□□ -0.55
BRCC3P1-201ENST00000508559 CCZ1BP86790 482 aa11.64□□□□□ -0.55
BRCC3P1-201ENST00000508559 CCZ1P86791 482 aaPredicted RBP11.64□□□□□ -0.55
BRCC3P1-201ENST00000508559 IFRD2Q12894 506 aaPredicted RBP11.64□□□□□ -0.55
BRCC3P1-201ENST00000508559 PLD1Q13393 1074 aa11.64□□□□□ -0.55
BRCC3P1-201ENST00000508559 VEPH1Q14D04 833 aa11.64□□□□□ -0.55
BRCC3P1-201ENST00000508559 RAD9BQ6WBX8 426 aa11.64□□□□□ -0.55
BRCC3P1-201ENST00000508559 SPATA31D4Q6ZUB0 917 aa11.64□□□□□ -0.55
BRCC3P1-201ENST00000508559 H2AFVQ71UI9 128 aa11.64□□□□□ -0.55
BRCC3P1-201ENST00000508559 TMEM139Q8IV31 216 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms