RNA–Protein interactions for RNA: ENST00000508500.1

LMNA-222, Transcript of lamin A/C, humanhuman

TSL 1 (best)

Gene LMNA, Length 848 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-222ENST00000508500 CYP2S1Q96SQ9 504 aa17.35■□□□□ 0.37
LMNA-222ENST00000508500 XYLT2Q9H1B5 865 aa17.35■□□□□ 0.37
LMNA-222ENST00000508500 KCTD10Q9H3F6 313 aa17.35■□□□□ 0.37
LMNA-222ENST00000508500 GKN1Q9NS71 199 aa17.35■□□□□ 0.37
LMNA-222ENST00000508500 TMEM30AQ9NV96 361 aa17.35■□□□□ 0.37
LMNA-222ENST00000508500 DMAC2Q9NW81 257 aa17.35■□□□□ 0.37
LMNA-222ENST00000508500 C2orf42Q9NWW7 574 aa17.35■□□□□ 0.37
LMNA-222ENST00000508500 TACC1O75410 805 aa17.34■□□□□ 0.37
LMNA-222ENST00000508500 PRR29P0C7W0 189 aa17.34■□□□□ 0.37
LMNA-222ENST00000508500 BDNFP23560 247 aa17.34■□□□□ 0.37
LMNA-222ENST00000508500 DDX6P26196 483 aaKnown RBP eCLIP17.34■□□□□ 0.37
LMNA-222ENST00000508500 MAGEA11P43364 429 aa17.34■□□□□ 0.37
LMNA-222ENST00000508500 USP46P62068 366 aa17.34■□□□□ 0.37
LMNA-222ENST00000508500 SATB1Q01826 763 aa17.34■□□□□ 0.37
LMNA-222ENST00000508500 Q6ZS52 159 aa17.34■□□□□ 0.37
LMNA-222ENST00000508500 RALGPS2Q86X27 583 aaPredicted RBP17.34■□□□□ 0.37
LMNA-222ENST00000508500 CEP57L1Q8IYX8 460 aa17.34■□□□□ 0.37
LMNA-222ENST00000508500 MSANTD3Q96H12 275 aa17.34■□□□□ 0.37
LMNA-222ENST00000508500 PCED1BQ96HM7 432 aa17.34■□□□□ 0.37
LMNA-222ENST00000508500 FNBP1Q96RU3 617 aa17.34■□□□□ 0.37
LMNA-222ENST00000508500 MMS19Q96T76 1030 aa17.34■□□□□ 0.37
LMNA-222ENST00000508500 DPEP3Q9H4B8 488 aa17.34■□□□□ 0.37
LMNA-222ENST00000508500 TDP1Q9NUW8 608 aa17.34■□□□□ 0.37
LMNA-222ENST00000508500 ZSCAN32Q9NX65 697 aa17.34■□□□□ 0.37
LMNA-222ENST00000508500 CGNQ9P2M7 1197 aaKnown RBP17.34■□□□□ 0.37
LMNA-222ENST00000508500 MAGEC2Q9UBF1 373 aaPredicted RBP17.34■□□□□ 0.37
LMNA-222ENST00000508500 ZMYM5Q9UJ78 669 aa17.34■□□□□ 0.37
LMNA-222ENST00000508500 PCDHGA2Q9Y5H1 932 aa17.34■□□□□ 0.37
LMNA-222ENST00000508500 FAM237AA0A1B0GTK4 181 aa17.33■□□□□ 0.36
LMNA-222ENST00000508500 LRRIQ3A6PVS8 624 aaPredicted RBP17.33■□□□□ 0.36
LMNA-222ENST00000508500 SOBPA7XYQ1 873 aa17.33■□□□□ 0.36
LMNA-222ENST00000508500 EXOC3O60645 756 aa17.33■□□□□ 0.36
LMNA-222ENST00000508500 KINO60870 393 aaKnown RBP17.33■□□□□ 0.36
LMNA-222ENST00000508500 STAU1O95793 577 aaKnown RBP17.33■□□□□ 0.36
LMNA-222ENST00000508500 AVPR1AP37288 418 aa17.33■□□□□ 0.36
LMNA-222ENST00000508500 CACNA2D1P54289 1103 aa17.33■□□□□ 0.36
LMNA-222ENST00000508500 DLG4P78352 724 aa17.33■□□□□ 0.36
LMNA-222ENST00000508500 CLDN10P78369 228 aa17.33■□□□□ 0.36
LMNA-222ENST00000508500 PLCB2Q00722 1185 aa17.33■□□□□ 0.36
LMNA-222ENST00000508500 PON2Q15165 354 aa17.33■□□□□ 0.36
LMNA-222ENST00000508500 WDR72Q3MJ13 1102 aa17.33■□□□□ 0.36
LMNA-222ENST00000508500 TDRD10Q5VZ19 366 aaKnown RBP17.33■□□□□ 0.36
LMNA-222ENST00000508500 PARD3BQ8TEW8 1205 aa17.33■□□□□ 0.36
LMNA-222ENST00000508500 MRPS31Q92665 395 aaKnown RBP17.33■□□□□ 0.36
LMNA-222ENST00000508500 SPATA32Q96LK8 384 aa17.33■□□□□ 0.36
LMNA-222ENST00000508500 GCNT4Q9P109 453 aa17.33■□□□□ 0.36
LMNA-222ENST00000508500 R3HCC1Q9Y3T6 440 aaKnown RBP17.33■□□□□ 0.36
LMNA-222ENST00000508500 SDK1Q7Z5N4 2213 aa17.33■□□□□ 0.36
LMNA-222ENST00000508500 NCOR2Q9Y618 2525 aa17.32■□□□□ 0.36
LMNA-222ENST00000508500 C2orf78A6NCI8 922 aa17.32■□□□□ 0.36
LMNA-222ENST00000508500 VNN1O95497 513 aa17.32■□□□□ 0.36
LMNA-222ENST00000508500 C4BPAP04003 597 aaKnown RBP17.32■□□□□ 0.36
LMNA-222ENST00000508500 TGM1P22735 817 aa17.32■□□□□ 0.36
LMNA-222ENST00000508500 GNL1P36915 607 aaPredicted RBP17.32■□□□□ 0.36
LMNA-222ENST00000508500 NDUFA8P51970 172 aa17.32■□□□□ 0.36
LMNA-222ENST00000508500 DMWDQ09019 674 aa17.32■□□□□ 0.36
LMNA-222ENST00000508500 CCINQ13939 588 aa17.32■□□□□ 0.36
LMNA-222ENST00000508500 ZNF268Q14587 947 aaPredicted RBP17.32■□□□□ 0.36
LMNA-222ENST00000508500 ITPRIPL2Q3MIP1 535 aa17.32■□□□□ 0.36
LMNA-222ENST00000508500 MDH1BQ5I0G3 518 aa17.32■□□□□ 0.36
LMNA-222ENST00000508500 VSTM1Q6UX27 236 aa17.32■□□□□ 0.36
LMNA-222ENST00000508500 C4orf50Q6ZRC1 276 aa17.32■□□□□ 0.36
LMNA-222ENST00000508500 MYCBPAPQ8TBZ2 947 aa17.32■□□□□ 0.36
LMNA-222ENST00000508500 TMEM174Q8WUU8 243 aa17.32■□□□□ 0.36
LMNA-222ENST00000508500 SPATA17Q96L03 361 aa17.32■□□□□ 0.36
LMNA-222ENST00000508500 IER2Q9BTL4 223 aa17.32■□□□□ 0.36
LMNA-222ENST00000508500 EBF3Q9H4W6 596 aa17.32■□□□□ 0.36
LMNA-222ENST00000508500 EXOC1Q9NV70 894 aa17.32■□□□□ 0.36
LMNA-222ENST00000508500 UXTQ9UBK9 157 aaPredicted RBP17.32■□□□□ 0.36
LMNA-222ENST00000508500 K7ESF4 209 aa17.31■□□□□ 0.36
LMNA-222ENST00000508500 FAM163BP0C2L3 166 aa17.31■□□□□ 0.36
LMNA-222ENST00000508500 ARSAP15289 507 aa17.31■□□□□ 0.36
LMNA-222ENST00000508500 PTPN1P18031 435 aaKnown RBP17.31■□□□□ 0.36
LMNA-222ENST00000508500 CDH8P55286 799 aa17.31■□□□□ 0.36
LMNA-222ENST00000508500 ZXDBP98169 803 aa17.31■□□□□ 0.36
LMNA-222ENST00000508500 CYP27A1Q02318 531 aa17.31■□□□□ 0.36
LMNA-222ENST00000508500 PSMD2Q13200 908 aa17.31■□□□□ 0.36
LMNA-222ENST00000508500 RUNX3Q13761 415 aa17.31■□□□□ 0.36
LMNA-222ENST00000508500 ZNF77Q15935 545 aa17.31■□□□□ 0.36
LMNA-222ENST00000508500 C1orf220Q5T0J3 134 aa17.31■□□□□ 0.36
LMNA-222ENST00000508500 NAIF1Q69YI7 327 aaPredicted RBP17.31■□□□□ 0.36
LMNA-222ENST00000508500 PKN3Q6P5Z2 889 aa17.31■□□□□ 0.36
LMNA-222ENST00000508500 C1orf228Q6PIY5 440 aa17.31■□□□□ 0.36
LMNA-222ENST00000508500 SLC9A9Q8IVB4 645 aa17.31■□□□□ 0.36
LMNA-222ENST00000508500 SPEM1Q8N4L4 309 aa17.31■□□□□ 0.36
LMNA-222ENST00000508500 OR6B3Q8NGW1 331 aa17.31■□□□□ 0.36
LMNA-222ENST00000508500 ATRIPQ8WXE1 791 aa17.31■□□□□ 0.36
LMNA-222ENST00000508500 SDCBP2Q9H190 292 aa17.31■□□□□ 0.36
LMNA-222ENST00000508500 EPC1Q9H2F5 836 aa17.31■□□□□ 0.36
LMNA-222ENST00000508500 GOLPH3LQ9H4A5 285 aa17.31■□□□□ 0.36
LMNA-222ENST00000508500 VRTNQ9H8Y1 702 aa17.31■□□□□ 0.36
LMNA-222ENST00000508500 KIF9Q9HAQ2 790 aa17.31■□□□□ 0.36
LMNA-222ENST00000508500 FBRSL1Q9HCM7 1045 aaKnown RBP17.31■□□□□ 0.36
LMNA-222ENST00000508500 TRPC7Q9HCX4 862 aa17.31■□□□□ 0.36
LMNA-222ENST00000508500 THG1LQ9NWX6 298 aaKnown RBP17.31■□□□□ 0.36
LMNA-222ENST00000508500 MYO18AQ92614 2054 aaKnown RBP17.31■□□□□ 0.36
LMNA-222ENST00000508500 CLDN5O00501 218 aa17.3■□□□□ 0.36
LMNA-222ENST00000508500 PDXKO00764 312 aa17.3■□□□□ 0.36
LMNA-222ENST00000508500 RPN1P04843 607 aaKnown RBP17.3■□□□□ 0.36
LMNA-222ENST00000508500 GRIK1P39086 918 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms